# Pubmed Literature Miner

> Biomedical literature mining using PubMed/MEDLINE for systematic review support

- Skill: `a5c-ai/pubmed-literature-miner` (Agent Skill)
- Install (CLI): `npx skillmds@latest add a5c-ai/pubmed-literature-miner`
- Raw SKILL.md: https://api.skillmd.com/api/skills/a5c-ai/pubmed-literature-miner/raw
- Safety review: pending (external: skill-scanner PASS, skillspector PASS)
- Works with: Claude Code, Claude.ai, OpenAI Codex
- Category: Product & Planning
- Author: a5c-ai (https://skillmd.com/u/a5c-ai)
- Updated: 2026-09-09
- Page: https://skillmd.com/skills/a5c-ai/pubmed-literature-miner

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# PubMed Literature Miner

## Purpose

Provides biomedical literature mining capabilities using PubMed/MEDLINE for systematic review support and PICO framework analysis.

## Capabilities

- MeSH term-based search
- PICO element extraction
- Abstract screening automation
- Citation deduplication
- PRISMA flow diagram data generation
- Full-text retrieval coordination

## Usage Guidelines

1. **MeSH Terms**: Use controlled vocabulary for precise searches
2. **PICO Framework**: Structure searches around population, intervention, comparison, outcome
3. **Screening**: Apply inclusion/exclusion criteria systematically
4. **PRISMA Compliance**: Generate required flow diagram data

## Tools/Libraries

- Biopython
- PyMed
- NCBI E-utilities