# Skill Seekers

> Skill Seekers

- Skill: `hongmaple0820/skill-seekers` (Agent Skill, multi-file: 3 files)
- Install (CLI): `npx skillmds@latest add hongmaple0820/skill-seekers`
- Raw SKILL.md: https://api.skillmd.com/api/skills/hongmaple0820/skill-seekers/raw
- Safety review: pending
- Works with: Claude Code, Claude.ai, OpenAI Codex
- Category: Coding & Dev Tools
- Author: hongmaple0820 (https://skillmd.com/u/hongmaple0820)
- Updated: 2026-09-17
- Page: https://skillmd.com/skills/hongmaple0820/skill-seekers

---

# CLAUDE.md

This file provides guidance to Claude Code (claude.ai/code) when working with code in this repository.

## 🎯 Project Overview

**Skill Seekers** is a Python tool that converts documentation websites, GitHub repositories, and PDFs into LLM skills. It supports 4 platforms: Claude AI, Google Gemini, OpenAI ChatGPT, and Generic Markdown.

**Current Version:** v2.9.0
**Python Version:** 3.10+ required
**Status:** Production-ready, published on PyPI
**Website:** https://skillseekersweb.com/ - Browse configs, share, and access documentation

## ⚡ Quick Command Reference (Most Used)

**First time setup:**
```bash
pip install -e .  # REQUIRED before running tests or CLI
```

**Running tests (NEVER skip - user requirement):**
```bash
pytest tests/ -v  # All tests
pytest tests/test_scraper_features.py -v  # Single file
pytest tests/ --cov=src/skill_seekers --cov-report=html  # With coverage
```

**Code quality checks (matches CI):**
```bash
ruff check src/ tests/  # Lint
ruff format src/ tests/  # Format
mypy src/skill_seekers  # Type check
```

**Common workflows:**
```bash
# Documentation scraping
skill-seekers scrape --config configs/react.json

# GitHub analysis
skill-seekers github --repo facebook/react

# Local codebase analysis
skill-seekers analyze --directory . --comprehensive

# Package for all platforms
skill-seekers package output/react/ --target claude
skill-seekers package output/react/ --target gemini
```

## 🏗️ Architecture

### Core Design Pattern: Platform Adaptors

The codebase uses the **Strategy Pattern** with a factory method to support multiple LLM platforms:

```
src/skill_seekers/cli/adaptors/
├── __init__.py          # Factory: get_adaptor(target)
├── base_adaptor.py      # Abstract base class
├── claude_adaptor.py    # Claude AI (ZIP + YAML)
├── gemini_adaptor.py    # Google Gemini (tar.gz)
├── openai_adaptor.py    # OpenAI ChatGPT (ZIP + Vector Store)
└── markdown_adaptor.py  # Generic Markdown (ZIP)
```

**Key Methods:**
- `package(skill_dir, output_path)` - Platform-specific packaging
- `upload(package_path, api_key)` - Platform-specific upload
- `enhance(skill_dir, mode)` - AI enhancement with platform-specific models

### Data Flow (5 Phases)

1. **Scrape Phase** (`doc_scraper.py:scrape_all()`)
   - BFS traversal from base_url
   - Output: `output/{name}_data/pages/*.json`

2. **Build Phase** (`doc_scraper.py:build_skill()`)
   - Load pages → Categorize → Extract patterns
   - Output: `output/{name}/SKILL.md` + `references/*.md`

3. **Enhancement Phase** (optional, `enhance_skill_local.py`)
   - LLM analyzes references → Rewrites SKILL.md
   - Platform-specific models (Sonnet 4, Gemini 2.0, GPT-4o)

4. **Package Phase** (`package_skill.py` → adaptor)
   - Platform adaptor packages in appropriate format
   - Output: `.zip` or `.tar.gz`

5. **Upload Phase** (optional, `upload_skill.py` → adaptor)
   - Upload via platform API

### File Structure (src/ layout)

```
src/skill_seekers/
├── cli/                              # CLI tools
│   ├── main.py                       # Git-style CLI dispatcher
│   ├── doc_scraper.py                # Main scraper (~790 lines)
│   ├── github_scraper.py             # GitHub repo analysis
│   ├── pdf_scraper.py                # PDF extraction
│   ├── unified_scraper.py            # Multi-source scraping
│   ├── codebase_scraper.py           # Local codebase analysis (C2.x)
│   ├── unified_codebase_analyzer.py  # Three-stream GitHub+local analyzer
│   ├── enhance_skill_local.py        # AI enhancement (LOCAL mode)
│   ├── enhance_status.py             # Enhancement status monitoring
│   ├── package_skill.py              # Skill packager
│   ├── upload_skill.py               # Upload to platforms
│   ├── install_skill.py              # Complete workflow automation
│   ├── install_agent.py              # Install to AI agent directories
│   ├── pattern_recognizer.py         # C3.1 Design pattern detection
│   ├── test_example_extractor.py     # C3.2 Test example extraction
│   ├── how_to_guide_builder.py       # C3.3 How-to guide generation
│   ├── config_extractor.py           # C3.4 Configuration extraction
│   ├── generate_router.py            # C3.5 Router skill generation
│   ├── code_analyzer.py              # Multi-language code analysis
│   ├── api_reference_builder.py      # API documentation builder
│   ├── dependency_analyzer.py        # Dependency graph analysis
│   ├── signal_flow_analyzer.py       # C3.10 Signal flow analysis (Godot)
│   └── adaptors/                     # Platform adaptor architecture
│       ├── __init__.py
│       ├── base_adaptor.py
│       ├── claude_adaptor.py
│       ├── gemini_adaptor.py
│       ├── openai_adaptor.py
│       └── markdown_adaptor.py
└── mcp/                              # MCP server integration
    ├── server.py                     # FastMCP server (stdio + HTTP)
    └── tools/                        # 18 MCP tool implementations
```

## 🛠️ Development Commands

### Setup

```bash
# Install in editable mode (required before tests due to src/ layout)
pip install -e .

# Install with all platform dependencies
pip install -e ".[all-llms]"

# Install specific platforms
pip install -e ".[gemini]"   # Google Gemini
pip install -e ".[openai]"   # OpenAI ChatGPT
```

### Running Tests

**CRITICAL: Never skip tests** - User requires all tests to pass before commits.

```bash
# All tests (must run pip install -e . first!)
pytest tests/ -v

# Specific test file
pytest tests/test_scraper_features.py -v

# Multi-platform tests
pytest tests/test_install_multiplatform.py -v

# With coverage
pytest tests/ --cov=src/skill_seekers --cov-report=term --cov-report=html

# Single test
pytest tests/test_scraper_features.py::test_detect_language -v

# MCP server tests
pytest tests/test_mcp_fastmcp.py -v
```

**Test Architecture:**
- 46 test files covering all features
- CI Matrix: Ubuntu + macOS, Python 3.10-3.13
- 700+ tests passing
- Must run `pip install -e .` before tests (src/ layout requirement)

### Building & Publishing

```bash
# Build package (using uv - recommended)
uv build

# Or using build
python -m build

# Publish to PyPI
uv publish

# Or using twine
python -m twine upload dist/*
```

### Testing CLI Commands

```bash
# Test configuration wizard (NEW: v2.7.0)
skill-seekers config --show                          # Show current configuration
skill-seekers config --github                        # GitHub token setup
skill-seekers config --test                          # Test connections

# Test resume functionality (NEW: v2.7.0)
skill-seekers resume --list                          # List resumable jobs
skill-seekers resume --clean                         # Clean up old jobs

# Test GitHub scraping with profiles (NEW: v2.7.0)
skill-seekers github --repo facebook/react --profile personal    # Use specific profile
skill-seekers github --repo owner/repo --non-interactive         # CI/CD mode

# Test scraping (dry run)
skill-seekers scrape --config configs/react.json --dry-run

# Test codebase analysis (C2.x features)
skill-seekers analyze --directory . --output output/codebase/

# Test pattern detection (C3.1)
skill-seekers patterns --file src/skill_seekers/cli/code_analyzer.py

# Test how-to guide generation (C3.3)
skill-seekers how-to-guides output/test_examples.json --output output/guides/

# Test enhancement status monitoring
skill-seekers enhance-status output/react/ --watch

# Test multi-platform packaging
skill-seekers package output/react/ --target gemini --dry-run

# Test MCP server (stdio mode)
python -m skill_seekers.mcp.server_fastmcp

# Test MCP server (HTTP mode)
python -m skill_seekers.mcp.server_fastmcp --transport http --port 8765
```

## 🔧 Key Implementation Details

### CLI Architecture (Git-style)

**Entry point:** `src/skill_seekers/cli/main.py`

The unified CLI modifies `sys.argv` and calls existing `main()` functions to maintain backward compatibility:

```python
# Example: skill-seekers scrape --config react.json
# Transforms to: doc_scraper.main() with modified sys.argv
```

**Subcommands:** scrape, github, pdf, unified, codebase, enhance, enhance-status, package, upload, estimate, install, install-agent, patterns, how-to-guides

**Recent Additions:**
- `codebase` - Local codebase analysis without GitHub API (C2.x + C3.x features)
- `enhance-status` - Monitor background/daemon enhancement processes
- `patterns` - Detect design patterns in code (C3.1)
- `how-to-guides` - Generate educational guides from tests (C3.3)

### Platform Adaptor Usage

```python
from skill_seekers.cli.adaptors import get_adaptor

# Get platform-specific adaptor
adaptor = get_adaptor('gemini')  # or 'claude', 'openai', 'markdown'

# Package skill
adaptor.package(skill_dir='output/react/', output_path='output/')

# Upload to platform
adaptor.upload(
    package_path='output/react-gemini.tar.gz',
    api_key=os.getenv('GOOGLE_API_KEY')
)

# AI enhancement
adaptor.enhance(skill_dir='output/react/', mode='api')
```

### C3.x Codebase Analysis Features

The project has comprehensive codebase analysis capabilities (C3.1-C3.8):

**C3.1 Design Pattern Detection** (`pattern_recognizer.py`):
- Detects 10 common patterns: Singleton, Factory, Observer, Strategy, Decorator, Builder, Adapter, Command, Template Method, Chain of Responsibility
- Supports 9 languages: Python, JavaScript, TypeScript, C++, C, C#, Go, Rust, Java
- Three detection levels: surface (fast), deep (balanced), full (thorough)
- 87% precision, 80% recall on real-world projects

**C3.2 Test Example Extraction** (`test_example_extractor.py`):
- Extracts real usage examples from test files
- Categories: instantiation, method_call, config, setup, workflow
- AST-based for Python, regex-based for 8 other languages
- Quality filtering with confidence scoring

**C3.3 How-To Guide Generation** (`how_to_guide_builder.py`):
- Transforms test workflows into educational guides
- 5 AI enhancements: step descriptions, troubleshooting, prerequisites, next steps, use cases
- Dual-mode AI: API (fast) or LOCAL (free with Claude Code Max)
- 4 grouping strategies: AI tutorial group, file path, test name, complexity

**C3.4 Configuration Pattern Extraction** (`config_extractor.py`):
- Extracts configuration patterns from codebases
- Identifies config files, env vars, CLI arguments
- AI enhancement for better organization

**C3.5 Architectural Overview** (`generate_router.py`):
- Generates comprehensive ARCHITECTURE.md files
- Router skill generation for large documentation
- Quality improvements: 6.5/10 → 8.5/10 (+31%)
- Integrates GitHub metadata, issues, labels

**C3.6 AI Enhancement** (Claude API integration):
- Enhances C3.1-C3.5 with AI-powered insights
- Pattern explanations and improvement suggestions
- Test example context and best practices
- Guide enhancement with troubleshooting and prerequisites

**C3.7 Architectural Pattern Detection** (`architectural_pattern_detector.py`):
- Detects 8 architectural patterns (MVC, MVVM, MVP, Repository, etc.)
- Framework detection (Django, Flask, Spring, React, Angular, etc.)
- Multi-file analysis with directory structure patterns
- Evidence-based detection with confidence scoring

**C3.8 Standalone Codebase Scraper** (`codebase_scraper.py`):
```bash
# Quick analysis (1-2 min, basic features only)
skill-seekers analyze --directory /path/to/repo --quick

# Comprehensive analysis (20-60 min, all features + AI)
skill-seekers analyze --directory . --comprehensive

# With AI enhancement (auto-detects API or LOCAL)
skill-seekers analyze --directory . --enhance

# Granular AI enhancement control (NEW)
skill-seekers analyze --directory . --enhance-level 1  # SKILL.md only
skill-seekers analyze --directory . --enhance-level 2  # + Architecture + Config + Docs
skill-seekers analyze --directory . --enhance-level 3  # Full enhancement (all features)

# Disable specific features
skill-seekers analyze --directory . --skip-patterns --skip-how-to-guides
```

- Generates 300+ line standalone SKILL.md files from codebases
- All C3.x features integrated (patterns, tests, guides, config, architecture, docs)
- Complete codebase analysis without documentation scraping
- **NEW**: Granular AI enhancement control with `--enhance-level` (0-3)

**C3.9 Project Documentation Extraction** (`codebase_scraper.py`):
- Extracts and categorizes all markdown files from the project
- Auto-detects categories: overview, architecture, guides, workflows, features, etc.
- Integrates documentation into SKILL.md with summaries
- AI enhancement (level 2+) adds topic extraction and cross-references
- Controlled by depth: surface=raw copy, deep=parse+summarize, full=AI-enhanced
- Default ON, use `--skip-docs` to disable

**C3.10 Signal Flow Analysis for Godot Projects** (`signal_flow_analyzer.py`):
- Complete signal flow analysis system for event-driven Godot architectures
- Signal declaration extraction (detects `signal` keyword declarations)
- Connection mapping (tracks `.connect()` calls with targets and methods)
- Emission tracking (finds `.emit()` and `emit_signal()` calls)
- Real-world metrics: 208 signals, 634 connections, 298 emissions in test project
- Signal density metrics (signals per file)
- Event chain detection (signals triggering other signals)
- Signal pattern detection:
  - **EventBus Pattern** (0.90 confidence): Centralized signal hub in autoload
  - **Observer Pattern** (0.85 confidence): Multi-observer signals (3+ listeners)
  - **Event Chains** (0.80 confidence): Cascading signal propagation
- Signal-based how-to guides (C3.10.1):
  - AI-generated step-by-step usage guides (Connect → Emit → Handle)
  - Real code examples from project
  - Common usage locations
  - Parameter documentation
- Outputs: `signal_flow.json`, `signal_flow.mmd` (Mermaid diagram), `signal_reference.md`, `signal_how_to_guides.md`
- Comprehensive Godot 4.x support:
  - GDScript (.gd), Scene files (.tscn), Resources (.tres), Shaders (.gdshader)
  - GDScript test extraction (GUT, gdUnit4, WAT frameworks)
  - 396 test cases extracted in test project
  - Framework detection (Unity, Unreal, Godot)

**Key Architecture Decision (BREAKING in v2.5.2):**
- Changed from opt-in (`--build-*`) to opt-out (`--skip-*`) flags
- All analysis features now ON by default for maximum value
- Backward compatibility warnings for deprecated flags

### Smart Categorization Algorithm

Located in `doc_scraper.py:smart_categorize()`:
- Scores pages against category keywords
- 3 points for URL match, 2 for title, 1 for content
- Threshold of 2+ for categorization
- Auto-infers categories from URL segments if none provided
- Falls back to "other" category

### Language Detection

Located in `doc_scraper.py:detect_language()`:
1. CSS class attributes (`language-*`, `lang-*`)
2. Heuristics (keywords like `def`, `const`, `func`)

### Configuration File Structure

Configs (`configs/*.json`) define scraping behavior:

```json
{
  "name": "framework-name",
  "description": "When to use this skill",
  "base_url": "https://docs.example.com/",
  "selectors": {
    "main_content": "article",  // CSS selector
    "title": "h1",
    "code_blocks": "pre code"
  },
  "url_patterns": {
    "include": ["/docs"],
    "exclude": ["/blog"]
  },
  "categories": {
    "getting_started": ["intro", "quickstart"],
    "api": ["api", "reference"]
  },
  "rate_limit": 0.5,
  "max_pages": 500
}
```

## 🧪 Testing Guidelines

### Test Coverage Requirements

- Core features: 100% coverage required
- Platform adaptors: Each platform has dedicated tests
- MCP tools: All 18 tools must be tested
- Integration tests: End-to-end workflows

### Test Markers (from pytest.ini_options)

The project uses pytest markers to categorize tests:

```bash
# Run only fast unit tests (default)
pytest tests/ -v

# Include slow tests (>5 seconds)
pytest tests/ -v -m slow

# Run integration tests (requires external services)
pytest tests/ -v -m integration

# Run end-to-end tests (resource-intensive, creates files)
pytest tests/ -v -m e2e

# Run tests requiring virtual environment setup
pytest tests/ -v -m venv

# Run bootstrap feature tests
pytest tests/ -v -m bootstrap

# Skip slow and integration tests (fastest)
pytest tests/ -v -m "not slow and not integration"
```

### Test Execution Strategy

**By default, only fast tests run**. Use markers to control test execution:

```bash
# Default: Only fast tests (skip slow/integration/e2e)
pytest tests/ -v

# Include slow tests (>5 seconds)
pytest tests/ -v -m slow

# Include integration tests (requires external services)
pytest tests/ -v -m integration

# Include resource-intensive e2e tests (creates files)
pytest tests/ -v -m e2e

# Run ONLY fast tests (explicit)
pytest tests/ -v -m "not slow and not integration and not e2e"

# Run everything (CI does this)
pytest tests/ -v -m ""
```

**When to use which:**
- **Local development:** Default (fast tests only) - `pytest tests/ -v`
- **Pre-commit:** Fast tests - `pytest tests/ -v`
- **Before PR:** Include slow + integration - `pytest tests/ -v -m "not e2e"`
- **CI validation:** All tests run automatically

### Key Test Files

- `test_scraper_features.py` - Core scraping functionality
- `test_mcp_server.py` - MCP integration (18 tools)
- `test_mcp_fastmcp.py` - FastMCP framework
- `test_unified.py` - Multi-source scraping
- `test_github_scraper.py` - GitHub analysis
- `test_pdf_scraper.py` - PDF extraction
- `test_install_multiplatform.py` - Multi-platform packaging
- `test_integration.py` - End-to-end workflows
- `test_install_skill.py` - One-command install
- `test_install_agent.py` - AI agent installation
- `conftest.py` - Test configuration (checks package installation)

## 🌐 Environment Variables

```bash
# Claude AI / Compatible APIs
# Option 1: Official Anthropic API (default)
export ANTHROPIC_API_KEY=sk-ant-...

# Option 2: GLM-4.7 Claude-compatible API (or any compatible endpoint)
export ANTHROPIC_API_KEY=your-api-key
export ANTHROPIC_BASE_URL=https://glm-4-7-endpoint.com/v1

# Google Gemini (optional)
export GOOGLE_API_KEY=AIza...

# OpenAI ChatGPT (optional)
export OPENAI_API_KEY=sk-...

# GitHub (for higher rate limits)
export GITHUB_TOKEN=ghp_...

# Private config repositories (optional)
export GITLAB_TOKEN=glpat-...
export GITEA_TOKEN=...
export BITBUCKET_TOKEN=...
```

**All AI enhancement features respect these settings**:
- `enhance_skill.py` - API mode SKILL.md enhancement
- `ai_enhancer.py` - C3.1/C3.2 pattern and test example enhancement
- `guide_enhancer.py` - C3.3 guide enhancement
- `config_enhancer.py` - C3.4 configuration enhancement
- `adaptors/claude.py` - Claude platform adaptor enhancement

**Note**: Setting `ANTHROPIC_BASE_URL` allows you to use any Claude-compatible API endpoint, such as GLM-4.7 (智谱 AI).

## 📦 Package Structure (pyproject.toml)

### Entry Points

```toml
[project.scripts]
# Main unified CLI
skill-seekers = "skill_seekers.cli.main:main"

# Individual tool entry points
skill-seekers-config = "skill_seekers.cli.config_command:main"                # NEW: v2.7.0 Configuration wizard
skill-seekers-resume = "skill_seekers.cli.resume_command:main"                # NEW: v2.7.0 Resume interrupted jobs
skill-seekers-scrape = "skill_seekers.cli.doc_scraper:main"
skill-seekers-github = "skill_seekers.cli.github_scraper:main"
skill-seekers-pdf = "skill_seekers.cli.pdf_scraper:main"
skill-seekers-unified = "skill_seekers.cli.unified_scraper:main"
skill-seekers-codebase = "skill_seekers.cli.codebase_scraper:main"           # NEW: C2.x
skill-seekers-enhance = "skill_seekers.cli.enhance_skill_local:main"
skill-seekers-enhance-status = "skill_seekers.cli.enhance_status:main"       # NEW: Status monitoring
skill-seekers-package = "skill_seekers.cli.package_skill:main"
skill-seekers-upload = "skill_seekers.cli.upload_skill:main"
skill-seekers-estimate = "skill_seekers.cli.estimate_pages:main"
skill-seekers-install = "skill_seekers.cli.install_skill:main"
skill-seekers-install-agent = "skill_seekers.cli.install_agent:main"
skill-seekers-patterns = "skill_seekers.cli.pattern_recognizer:main"         # NEW: C3.1
skill-seekers-how-to-guides = "skill_seekers.cli.how_to_guide_builder:main" # NEW: C3.3
```

### Optional Dependencies

```toml
[project.optional-dependencies]
gemini = ["google-generativeai>=0.8.0"]
openai = ["openai>=1.0.0"]
all-llms = ["google-generativeai>=0.8.0", "openai>=1.0.0"]

[dependency-groups]  # PEP 735 (replaces tool.uv.dev-dependencies)
dev = [
    "pytest>=8.4.2",
    "pytest-asyncio>=0.24.0",
    "pytest-cov>=7.0.0",
    "coverage>=7.11.0",
]
```

**Note:** Project uses PEP 735 `dependency-groups` instead of deprecated `tool.uv.dev-dependencies`.

## 🚨 Critical Development Notes

### Must Run Before Tests

```bash
# REQUIRED: Install package before running tests
pip install -e .

# Why: src/ layout requires package installation
# Without this, imports will fail
```

### Never Skip Tests

Per user instructions in `~/.claude/CLAUDE.md`:
- "never skipp any test. always make sure all test pass"
- All 700+ tests must pass before commits
- Run full test suite: `pytest tests/ -v`

### Platform-Specific Dependencies

Platform dependencies are optional:
```bash
# Install only what you need
pip install skill-seekers[gemini]  # Gemini support
pip install skill-seekers[openai]  # OpenAI support
pip install skill-seekers[all-llms]  # All platforms
```

### AI Enhancement Modes

AI enhancement transforms basic skills (2-3/10) into production-ready skills (8-9/10). Two modes available:

**API Mode** (default if ANTHROPIC_API_KEY is set):
- Direct Claude API calls (fast, efficient)
- Cost: ~$0.15-$0.30 per skill
- Perfect for CI/CD automation
- Requires: `export ANTHROPIC_API_KEY=sk-ant-...`

**LOCAL Mode** (fallback if no API key):
- Uses Claude Code CLI (your existing Max plan)
- Free! No API charges
- 4 execution modes:
  - Headless (default): Foreground, waits for completion
  - Background (`--background`): Returns immediately
  - Daemon (`--daemon`): Fully detached with nohup
  - Terminal (`--interactive-enhancement`): Opens new terminal (macOS)
- Status monitoring: `skill-seekers enhance-status output/react/ --watch`
- Timeout configuration: `--timeout 300` (seconds)

**Force Mode** (default ON since v2.5.2):
- Skip all confirmations automatically
- Perfect for CI/CD, batch processing
- Use `--no-force` to enable prompts if needed

```bash
# API mode (if ANTHROPIC_API_KEY is set)
skill-seekers enhance output/react/

# LOCAL mode (no API key needed)
skill-seekers enhance output/react/ --mode LOCAL

# Background with status monitoring
skill-seekers enhance output/react/ --background
skill-seekers enhance-status output/react/ --watch

# Force mode OFF (enable prompts)
skill-seekers enhance output/react/ --no-force
```

See `docs/ENHANCEMENT_MODES.md` for detailed documentation.

### Git Workflow

- Main branch: `main`
- Current branch: `development`
- Always create feature branches from `development`
- Feature branch naming: `feature/{task-id}-{description}` or `feature/{category}`

### CI/CD Pipeline

The project has GitHub Actions workflows in `.github/workflows/`:

**tests.yml** - Runs on every push and PR to `main` or `development`:

1. **Lint Job** (Python 3.12, Ubuntu):
   - `ruff check src/ tests/` - Code linting with GitHub annotations
   - `ruff format --check src/ tests/` - Format validation
   - `mypy src/skill_seekers` - Type checking (continue-on-error)

2. **Test Job** (Matrix):
   - **OS:** Ubuntu + macOS
   - **Python:** 3.10, 3.11, 3.12
   - **Exclusions:** macOS + Python 3.10 (speed optimization)
   - **Steps:**
     - Install dependencies + `pip install -e .`
     - Run CLI tests (scraper, config, integration)
     - Run MCP server tests
     - Generate coverage report → Upload to Codecov

3. **Summary Job** - Single status check for branch protection
   - Ensures both lint and test jobs succeed
   - Provides single "All Checks Complete" status

**release.yml** - Triggers on version tags (e.g., `v2.9.0`):
- Builds package with `uv build`
- Publishes to PyPI with `uv publish`
- Creates GitHub release

**Local Pre-Commit Validation**

Run the same checks as CI before pushing:

```bash
# 1. Code quality (matches lint job)
ruff check src/ tests/
ruff format --check src/ tests/
mypy src/skill_seekers

# 2. Tests (matches test job)
pip install -e .
pytest tests/ -v --cov=src/skill_seekers --cov-report=term

# 3. If all pass, you're good to push!
git push origin feature/my-feature
```

**Branch Protection Rules:**
- **main:** Requires tests + 1 review, only maintainers merge
- **development:** Requires tests to pass, default target for PRs

## 🚨 Common Pitfalls & Solutions

### 1. Import Errors
**Problem:** `ModuleNotFoundError: No module named 'skill_seekers'`

**Solution:** Must install package first due to src/ layout
```bash
pip install -e .
```

**Why:** The src/ layout prevents imports from repo root. Package must be installed.

### 2. Tests Fail with "No module named..."
**Problem:** Package not installed in test environment

**Solution:** CI runs `pip install -e .` before tests - do the same locally
```bash
pip install -e .
pytest tests/ -v
```

### 3. Platform-Specific Dependencies Not Found
**Problem:** `ModuleNotFoundError: No module named 'google.generativeai'`

**Solution:** Install platform-specific dependencies
```bash
pip install -e ".[gemini]"   # For Gemini
pip install -e ".[openai]"   # For OpenAI
pip install -e ".[all-llms]" # For all platforms
```

### 4. Git Branch Confusion
**Problem:** PR targets `main` instead of `development`

**Solution:** Always create PRs targeting `development` branch
```bash
git checkout development
git pull upstream development
git checkout -b feature/my-feature
# ... make changes ...
git push origin feature/my-feature
# Create PR: feature/my-feature → development
```

**Important:** See `CONTRIBUTING.md` for complete branch workflow.

### 5. Tests Pass Locally But Fail in CI
**Problem:** Different Python version or missing dependency

**Solution:** Test with multiple Python versions locally
```bash
# CI tests: Python 3.10, 3.11, 3.12 on Ubuntu + macOS
# Use pyenv or docker to test locally:
pyenv install 3.10.13 3.11.7 3.12.1

pyenv local 3.10.13
pip install -e . && pytest tests/ -v

pyenv local 3.11.7
pip install -e . && pytest tests/ -v

pyenv local 3.12.1
pip install -e . && pytest tests/ -v
```

### 6. Enhancement Not Working
**Problem:** AI enhancement fails or hangs

**Solutions:**
```bash
# Check if API key is set
echo $ANTHROPIC_API_KEY

# Try LOCAL mode instead (uses Claude Code Max, no API key needed)
skill-seekers enhance output/react/ --mode LOCAL

# Monitor enhancement status for background jobs
skill-seekers enhance-status output/react/ --watch
```

### 7. Rate Limit Errors from GitHub
**Problem:** `403 Forbidden` from GitHub API

**Solutions:**
```bash
# Check current rate limit
curl -H "Authorization: token $GITHUB_TOKEN" https://api.github.com/rate_limit

# Configure multiple GitHub profiles (recommended)
skill-seekers config --github

# Use specific profile
skill-seekers github --repo owner/repo --profile work

# Test all configured tokens
skill-seekers config --test
```

## 🔌 MCP Integration

### MCP Server (18 Tools)

**Transport modes:**
- stdio: Claude Code, VS Code + Cline
- HTTP: Cursor, Windsurf, IntelliJ IDEA

**Core Tools (9):**
1. `list_configs` - List preset configurations
2. `generate_config` - Generate config from docs URL
3. `validate_config` - Validate config structure
4. `estimate_pages` - Estimate page count
5. `scrape_docs` - Scrape documentation
6. `package_skill` - Package to .zip (supports `--target`)
7. `upload_skill` - Upload to platform (supports `--target`)
8. `enhance_skill` - AI enhancement with platform support
9. `install_skill` - Complete workflow automation

**Extended Tools (9):**
10. `scrape_github` - GitHub repository analysis
11. `scrape_pdf` - PDF extraction
12. `unified_scrape` - Multi-source scraping
13. `merge_sources` - Merge docs + code
14. `detect_conflicts` - Find discrepancies
15. `split_config` - Split large configs
16. `generate_router` - Generate router skills
17. `add_config_source` - Register git repos
18. `fetch_config` - Fetch configs from git

### Starting MCP Server

```bash
# stdio mode (Claude Code, VS Code + Cline)
python -m skill_seekers.mcp.server_fastmcp

# HTTP mode (Cursor, Windsurf, IntelliJ)
python -m skill_seekers.mcp.server_fastmcp --transport http --port 8765
```

## 📋 Common Workflows

### Adding a New Platform

1. Create adaptor in `src/skill_seekers/cli/adaptors/{platform}_adaptor.py`
2. Inherit from `BaseAdaptor`
3. Implement `package()`, `upload()`, `enhance()` methods
4. Add to factory in `adaptors/__init__.py`
5. Add optional dependency to `pyproject.toml`
6. Add tests in `tests/test_install_multiplatform.py`

### Adding a New Feature

1. Implement in appropriate CLI module
2. Add entry point to `pyproject.toml` if needed
3. Add tests in `tests/test_{feature}.py`
4. Run full test suite: `pytest tests/ -v`
5. Update CHANGELOG.md
6. Commit only when all tests pass

### Debugging Common Issues

**Import Errors:**
```bash
# Always ensure package is installed first
pip install -e .

# Verify installation
python -c "import skill_seekers; print(skill_seekers.__version__)"
```

**Rate Limit Issues:**
```bash
# Check current GitHub rate limit status
curl -H "Authorization: token $GITHUB_TOKEN" https://api.github.com/rate_limit

# Configure multiple GitHub profiles
skill-seekers config --github

# Test your tokens
skill-seekers config --test
```

**Enhancement Not Working:**
```bash
# Check if API key is set
echo $ANTHROPIC_API_KEY

# Try LOCAL mode instead (uses Claude Code Max)
skill-seekers enhance output/react/ --mode LOCAL

# Monitor enhancement status
skill-seekers enhance-status output/react/ --watch
```

**Test Failures:**
```bash
# Run specific failing test with verbose output
pytest tests/test_file.py::test_name -vv

# Run with print statements visible
pytest tests/test_file.py -s

# Run with coverage to see what's not tested
pytest tests/test_file.py --cov=src/skill_seekers --cov-report=term-missing

# Run only unit tests (skip slow integration tests)
pytest tests/ -v -m "not slow and not integration"
```

**Config Issues:**
```bash
# Validate config structure
skill-seekers-validate configs/myconfig.json

# Show current configuration
skill-seekers config --show

# Estimate pages before scraping
skill-seekers estimate configs/myconfig.json
```

## 🎯 Where to Make Changes

This section helps you quickly locate the right files when implementing common changes.

### Adding a New CLI Command

**Files to modify:**
1. **Create command file:** `src/skill_seekers/cli/my_command.py`
   ```python
   def main():
       """Entry point for my-command."""
       # Implementation
   ```

2. **Add entry point:** `pyproject.toml`
   ```toml
   [project.scripts]
   skill-seekers-my-command = "skill_seekers.cli.my_command:main"
   ```

3. **Update unified CLI:** `src/skill_seekers/cli/main.py`
   - Add subcommand handler to dispatcher

4. **Add tests:** `tests/test_my_command.py`
   - Test main functionality
   - Test CLI argument parsing
   - Test error cases

5. **Update docs:** `CHANGELOG.md` + `README.md` (if user-facing)

### Adding a New Platform Adaptor

**Files to modify:**
1. **Create adaptor:** `src/skill_seekers/cli/adaptors/my_platform_adaptor.py`
   ```python
   from .base_adaptor import BaseAdaptor

   class MyPlatformAdaptor(BaseAdaptor):
       def package(self, skill_dir, output_path):
           # Platform-specific packaging

       def upload(self, package_path, api_key):
           # Platform-specific upload

       def enhance(self, skill_dir, mode):
           # Platform-specific AI enhancement
   ```

2. **Register in factory:** `src/skill_seekers/cli/adaptors/__init__.py`
   ```python
   def get_adaptor(target):
       adaptors = {
           'claude': ClaudeAdaptor,
           'gemini': GeminiAdaptor,
           'openai': OpenAIAdaptor,
           'markdown': MarkdownAdaptor,
           'myplatform': MyPlatformAdaptor,  # ADD THIS
       }
   ```

3. **Add optional dependency:** `pyproject.toml`
   ```toml
   [project.optional-dependencies]
   myplatform = ["myplatform-sdk>=1.0.0"]
   ```

4. **Add tests:** `tests/test_adaptors/test_my_platform_adaptor.py`

5. **Update README:** Add to platform comparison table

### Adding a New Config Preset

**Files to modify:**
1. **Create config:** `configs/my_framework.json`
   ```json
   {
     "name": "my_framework",
     "base_url": "https://docs.myframework.com/",
     "selectors": {...},
     "categories": {...}
   }
   ```

2. **Test locally:**
   ```bash
   # Estimate first
   skill-seekers estimate configs/my_framework.json

   # Test scrape (small sample)
   skill-seekers scrape --config configs/my_framework.json --max-pages 50
   ```

3. **Add to README:** Update presets table in `README.md`

4. **Submit to website:** (Optional) Submit to SkillSeekersWeb.com

### Modifying Core Scraping Logic

**Key files by feature:**

| Feature | File | Size | Notes |
|---------|------|------|-------|
| Doc scraping | `src/skill_seekers/cli/doc_scraper.py` | ~90KB | Main scraper, BFS traversal |
| GitHub scraping | `src/skill_seekers/cli/github_scraper.py` | ~56KB | Repo analysis + metadata |
| GitHub API | `src/skill_seekers/cli/github_fetcher.py` | ~17KB | Rate limit handling |
| PDF extraction | `src/skill_seekers/cli/pdf_scraper.py` | Medium | PyMuPDF + OCR |
| Code analysis | `src/skill_seekers/cli/code_analyzer.py` | ~65KB | Multi-language AST parsing |
| Pattern detection | `src/skill_seekers/cli/pattern_recognizer.py` | Medium | C3.1 - 10 GoF patterns |
| Test extraction | `src/skill_seekers/cli/test_example_extractor.py` | Medium | C3.2 - 5 categories |
| Guide generation | `src/skill_seekers/cli/how_to_guide_builder.py` | ~45KB | C3.3 - AI-enhanced guides |
| Config extraction | `src/skill_seekers/cli/config_extractor.py` | ~32KB | C3.4 - 9 formats |
| Router generation | `src/skill_seekers/cli/generate_router.py` | ~43KB | C3.5 - Architecture docs |
| Signal flow | `src/skill_seekers/cli/signal_flow_analyzer.py` | Medium | C3.10 - Godot-specific |

**Always add tests when modifying core logic!**

### Adding MCP Tools

**Files to modify:**
1. **Add tool function:** `src/skill_seekers/mcp/tools/{category}_tools.py`

2. **Register tool:** `src/skill_seekers/mcp/server.py`
   ```python
   @mcp.tool()
   def my_new_tool(param: str) -> str:
       """Tool description."""
       # Implementation
   ```

3. **Add tests:** `tests/test_mcp_fastmcp.py`

4. **Update count:** README.md (currently 18 tools)

## 📚 Key Code Locations

**Documentation Scraper** (`src/skill_seekers/cli/doc_scraper.py`):
- `is_valid_url()` - URL validation
- `extract_content()` - Content extraction
- `detect_language()` - Code language detection
- `extract_patterns()` - Pattern extraction
- `smart_categorize()` - Smart categorization
- `infer_categories()` - Category inference
- `generate_quick_reference()` - Quick reference generation
- `create_enhanced_skill_md()` - SKILL.md generation
- `scrape_all()` - Main scraping loop
- `main()` - Entry point

**Codebase Analysis** (`src/skill_seekers/cli/`):
- `codebase_scraper.py` - Main CLI for local codebase analysis
- `code_analyzer.py` - Multi-language AST parsing (9 languages)
- `api_reference_builder.py` - API documentation generation
- `dependency_analyzer.py` - NetworkX-based dependency graphs
- `pattern_recognizer.py` - C3.1 design pattern detection
- `test_example_extractor.py` - C3.2 test example extraction
- `how_to_guide_builder.py` - C3.3 guide generation
- `config_extractor.py` - C3.4 configuration extraction
- `generate_router.py` - C3.5 router skill generation
- `signal_flow_analyzer.py` - C3.10 signal flow analysis (Godot projects)
- `unified_codebase_analyzer.py` - Three-stream GitHub+local analyzer

**AI Enhancement** (`src/skill_seekers/cli/`):
- `enhance_skill_local.py` - LOCAL mode enhancement (4 execution modes)
- `enhance_skill.py` - API mode enhancement
- `enhance_status.py` - Status monitoring for background processes
- `ai_enhancer.py` - Shared AI enhancement logic
- `guide_enhancer.py` - C3.3 guide AI enhancement
- `config_enhancer.py` - C3.4 config AI enhancement

**Platform Adaptors** (`src/skill_seekers/cli/adaptors/`):
- `__init__.py` - Factory function
- `base_adaptor.py` - Abstract base class
- `claude_adaptor.py` - Claude AI implementation
- `gemini_adaptor.py` - Google Gemini implementation
- `openai_adaptor.py` - OpenAI ChatGPT implementation
- `markdown_adaptor.py` - Generic Markdown implementation

**MCP Server** (`src/skill_seekers/mcp/`):
- `server.py` - FastMCP-based server
- `tools/` - 18 MCP tool implementations

**Configuration & Rate Limit Management** (NEW: v2.7.0 - `src/skill_seekers/cli/`):
- `config_manager.py` - Multi-token configuration system (~490 lines)
  - `ConfigManager` class - Singleton pattern for global config access
  - `add_github_profile()` - Add GitHub profile with token and strategy
  - `get_github_token()` - Smart fallback chain (CLI → Env → Config → Prompt)
  - `get_next_profile()` - Profile switching for rate limit handling
  - `save_progress()` / `load_progress()` - Job resumption support
  - `cleanup_old_progress()` - Auto-cleanup of old jobs (7 days default)
- `config_command.py` - Interactive configuration wizard (~400 lines)
  - `main_menu()` - 7-option main menu with navigation
  - `github_token_menu()` - GitHub profile management
  - `add_github_profile()` - Guided token setup with browser integration
  - `api_keys_menu()` - API key configuration for Claude/Gemini/OpenAI
  - `test_connections()` - Connection testing for tokens and API keys
- `rate_limit_handler.py` - Smart rate limit detection and handling (~450 lines)
  - `RateLimitHandler` class - Strategy pattern for rate limit handling
  - `check_upfront()` - Upfront rate limit check before starting
  - `check_response()` - Real-time detection from API responses
  - `handle_rate_limit()` - Execute strategy (prompt/wait/switch/fail)
  - `try_switch_profile()` - Automatic profile switching
  - `wait_for_reset()` - Countdown timer with live progress
  - `show_countdown_timer()` - Live terminal countdown display
- `resume_command.py` - Resume interrupted scraping jobs (~150 lines)
  - `list_resumable_jobs()` - Display all jobs with progress details
  - `resume_job()` - Resume from saved checkpoint
  - `clean_old_jobs()` - Cleanup old progress files

**GitHub Integration** (Modified for v2.7.0 - `src/skill_seekers/cli/`):
- `github_fetcher.py` - Integrated rate limit handler
  - Constructor now accepts `interactive` and `profile_name` parameters
  - `fetch()` - Added upfront rate limit check
  - All API calls check responses for rate limits
  - Raises `RateLimitError` when rate limit cannot be handled
- `github_scraper.py` - Added CLI flags
  - `--non-interactive` flag for CI/CD mode (fail fast)
  - `--profile` flag to select GitHub profile from config
  - Config supports `interactive` and `github_profile` keys

## 🎯 Project-Specific Best Practices

1. **Always use platform adaptors** - Never hardcode platform-specific logic
2. **Test all platforms** - Changes must work for all 4 platforms
3. **Maintain backward compatibility** - Legacy configs must still work
4. **Document API changes** - Update CHANGELOG.md for every release
5. **Keep dependencies optional** - Platform-specific deps are optional
6. **Use src/ layout** - Proper package structure with `pip install -e .`
7. **Run tests before commits** - Per user instructions, never skip tests

## 🐛 Debugging Tips

### Enable Verbose Logging

```bash
# Set environment variable for debug output
export SKILL_SEEKERS_DEBUG=1
skill-seekers scrape --config configs/react.json
```

### Test Single Function/Module

Run Python modules directly for debugging:
```bash
# Run modules with --help to see options
python -m skill_seekers.cli.doc_scraper --help
python -m skill

…(truncated)