Top Agent Skills

Validates generated SRS documents against IEEE 830-1998, fixing errors and reporting warnings.

Creates a machine-readable phased JSON plan bundle from a spec or feature description, producing a compact master manifest plus per-phase step files for resumable execution.

Guides a structured brainstorm that surfaces user ideas, explores directions, and produces a spec and report for later planning.

Create text-based diagrams with Mermaid.js v11 syntax, covering flowcharts, sequence diagrams, class diagrams, and more. Convert to SVG, PNG, or PDF via CLI, or embed in web pages with JavaScript.

Create new skills, modify and improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, edit, or optimize an existing skill, run evals to test a skill, benchmark skill performance with variance analysis, or optimize a skill's description for better triggering accuracy.

Designs system architecture, selects technology stack, creates ERD and sequence diagrams, and documents ADRs from BA artifacts, then declares a design freeze.

Guides backend development across API design, authentication, security, performance, architecture, and testing, with decision guides and defaults for production-ready systems.

Suggests manual context compaction at logical intervals to preserve context through task phases rather than arbitrary auto-compaction.

Breaks complex problems into iterative reasoning steps with revision, branching, and dynamic scope adjustment for multi-stage analysis and planning.

Define every visual attribute as structured VGL JSON for deterministic, reproducible image generation with Bria FIBO models, covering objects, lighting, camera settings, composition, and style.

Query the ClinPGx API for pharmacogenomic gene-drug data, clinical annotations, CPIC guidelines, and FDA drug labels.

Queries and displays Labstep electronic lab notebook data — experiments, protocols, resources, and inventory — via labstepPy, with an offline demo mode using synthetic biology data.

Search scientific papers via the BGPT MCP server and retrieve structured experimental data — methods, results, conclusions, quality scores, and 25+ metadata fields per paper.

Calculate polygenic risk scores from direct-to-consumer genetic data using published scoring files from the PGS Catalog and contextualize results against population reference distributions.

Compile SOUL.md character profiles into synthetic diploid genomes (.genome.json) via trait-to-allele mapping.

Automates sequencing quality control by running FastQC and MultiQC, extracting quality metrics, and generating publication-ready visualizations via a CLI or MCP stdio server.

Detect splice donor and acceptor sites in DNA sequences using the Genomic Intelligence G0 BigBird transformer, via the hosted /v1/tasks/splice/predict API. Returns per-position site probabilities and called sites.

Generates, edits, and transforms images via the Bria API, including text-to-image, background removal, product photography, and batch processing for e-commerce catalogs.

Identifies a medication from a photo and generates a genotype-informed dosage card using CPIC guidelines and real 23andMe data.

Predicts enhancer activity in DNA sequences using the hosted Genomic Intelligence G0 DeepSTARR model, returning per-window activity scores.

Generates e-commerce product catalog images from raw photos, including packshots, cutouts, dimensions images, lifestyle scenes, and marketplace variants for Amazon, Shopify, and Etsy.

Computes evidence-aware polygenic risk scores from local VCF or WGS files using the just-prs engine and a pinned local MCP server, with honest interpretation and model comparison.

Search, browse, and retrieve scientific protocols from protocols.io via REST API, including private protocols with client token authentication.

Simulates meiotic recombination to produce offspring genomes from parent pairs, modeling Mendelian segregation, de novo mutation, sex determination, trait inference, and clinical evaluation against a disease registry.

Analyze a single FASTA file (nucleotide or protein), compute sequence-level metrics (GC, ORFs, MW, pI, GRAVY, secondary-structure fractions) with Biopython, and write a Markdown report plus structured JSON for downstream chaining.

Predicts gene and transcript structure from a DNA sequence using the hosted Genomic Intelligence API, producing a report and JSON output.

Predicts tissue or cell-type gene expression (log TPM and TPM) from a TSS-centered DNA sequence using the hosted Genomic Intelligence G0 Expression model, conditioned on a free-text cell-type description.

Automates genome-wide association studies from genotype files to publication-ready results, running PLINK2 QC and REGENIE regression with Manhattan and QQ plots.

Searches UK Biobank's 12,000+ data fields and publications by natural language query, returning ranked field IDs and descriptions for research questions.

Annotates VCF variants using Ensembl VEP, ClinVar, and gnomAD, ranks them by predicted impact, and generates a reproducible report.

Performs deterministic image operations with Python Pillow: resizing, cropping, compositing, format conversion, watermarks, brightness/contrast adjustments, and web optimization.

Assesses genome, transcriptome, and protein completeness with BUSCO v6, automatically resolving the correct lineage from an organism description and generating reproducible reports.

Surface and clarify unknowns before prompting, log deviations during implementation, and verify understanding after, using HTML artifacts that pair prompts with outputs.

Guides test-driven development with a red-green-refactor loop, emphasizing behavior-focused tests and vertical slicing over horizontal test writing.

Triage issues through a state machine driven by triage roles, including gathering context, recommending actions, and applying outcomes.

Builds a throwaway prototype to answer a design question, choosing between a runnable terminal app for logic/state questions or multiple UI variations switchable from one route.

Turns a spec or requirements into a detailed, bite-sized implementation plan with exact file paths, code, and test steps for engineers with no codebase context.

Bootstraps the always-loaded rules layer for a new repository: writes a CLAUDE.md skeleton and a workflow.md model-notes rule, and optionally installs a native git pre-commit hook. Skips repos already rendered by the Loam Copier template.

Dispatch a code-reviewer subagent to catch issues before they cascade, with guidance on when to request review and how to act on feedback.

Guides implementing features and bug fixes test-first, enforcing the red-green-refactor cycle with mandatory failure verification.

Executes implementation plans by dispatching a fresh subagent per task and running two-stage reviews for spec compliance and code quality.

Designs Azure architectures and configures compute, storage, database, networking, identity, and security services.

Provides guidance and best practices for working with Argo CD, covering setup, configuration, deployment, operations, and troubleshooting.

Provides guidance and best practices for working with Apache Airflow, covering setup, development, deployment, and operations.

Set up and use 1Password CLI (op) for signing in, reading, and injecting secrets, with a required tmux session to manage authentication.

Provides guidance and best practices for working with containerd, covering setup, configuration, deployment, and troubleshooting.

Triage issues through a state machine driven by triage roles. Use when user wants to create an issue, triage issues, review incoming bugs or feature requests, prepare issues for an AFK agent, or manage issue workflow.

Unified design skill covering brand identity, design tokens, UI styling, logo and icon generation, corporate identity programs, presentations, banners, and social media images.

Designs strategic HTML presentations with data visualization, layout patterns, and copywriting formulas for marketing and pitch decks.

Create new agent skills with proper structure, progressive disclosure, and bundled resources. Use when user wants to create, write, or build a new skill.

Structures immediate next steps into a dependency-ordered plan, gated by the current action_gate mode, with checkpoints and risk flags before execution.

Generates design systems and UI/UX recommendations for React Native projects, with domain-specific searches for styles, colors, typography, and best practices.

Configures a repository's issue tracker, triage labels, and domain documentation so engineering skills can operate correctly.

Create exercise directory structures with sections, problems, solutions, and explainers that pass linting, then commit with git.

Autonomously repairs failed task verification by choosing retry, decompose, prune, or escalate strategies before surfacing to the user.

Enforces a verification gate before any completion claim, requiring fresh command output as evidence.

Migrate TypeScript test code from `as` assertions to type-safe `shoehorn` helpers like `fromPartial` and `fromAny`.

Executes a written implementation plan in a separate session, reviewing it critically, running tasks with verification, and stopping to ask for help when blocked.

Generates multiple radically different interface designs for a module, compares them, and synthesizes the best approach.

Implements Apple's Liquid Glass design system for iOS 26 apps, covering SwiftUI, UIKit, and WidgetKit integration with glass effects, morphing transitions, and customization.