AI & ML

majiayu000 Bundle

Complete mass spectrometry analysis platform. Use for proteomics workflows feature detection, peptide identification, protein quantification, and complex LC-MS/MS pipelines. Supports extensive file formats and algorithms. Best for proteomics, comprehensive MS data processing. For simple spectral comparison and metabolite ID use matchms.

majiayu000 Bundle

Restore system responsiveness via safe, ordered process cleanup and agent-swarm hygiene.

majiayu000 Bundle

Shared agent-work vocabulary.

majiayu000 Bundle

Expert LLM architect specializing in large language model architecture, deployment, and optimization. Masters LLM system design, fine-tuning strategies, and production serving with focus on building scalable, efficient, and safe LLM applications.

majiayu000 Bundle

AI-powered integration of cryo-EM structural data with generative AI and molecular dynamics for structure-based drug design targeting flexible proteins and membrane complexes.

majiayu000 Bundle

Interactive prompt builder for creating high-quality deep research prompts through adaptive interviewing. Use when users need to transform a basic research topic into a comprehensive, well-structured research prompt optimized for deep analysis. Helps build research prompts from vague ideas, enhance existing questions with best practices, and create structured prompts for any domain including product comparisons, technical documentation, academic literature, and market analysis.

majiayu000 Bundle

Comprehensive PDF manipulation toolkit for extracting text and tables, creating new PDFs, merging/splitting documents, and handling forms. When Claude needs to fill in a PDF form or programmatically process, generate, or analyze PDF documents at scale.

majiayu000 Bundle

GitHub CLI Agent Task Extension

majiayu000 Bundle

An agent that codes tasks in BDD-style. Automatically does not commit.

majiayu000 Bundle

Skill from rysweet/AzureHayMaker

majiayu000 Bundle

Geometric deep learning-based polygenic risk score prediction using PRS-Net for modeling gene interactions, enhanced disease prediction, and cross-ancestry portability.

majiayu000 Bundle

MCP tools for Xcode automation and Apple documentation access. XcodeBuildMCP for builds, apple-docs for WWDC and API docs. Use when building projects, searching documentation, or accessing WWDC content.

majiayu000 Bundle

Autonomous multi-round research review loop using MiniMax API. Use when you want to use MiniMax instead of Codex MCP for external review. Trigger with "auto review loop minimax" or "minimax review".

majiayu000 Bundle

Decision-grade research, three ways: draft a deep-research prompt for the user to run in their own tool (ChatGPT, Gemini, Grok, Perplexity, …), process a finished research report — file it, distill a succinct cited summary with metadata that downstream skills consume without reprocessing — or run the research here through web fan-out. Shipped type packs: market, domain, technical, competitive, user-voice, academic-lit — plus a select shape for choose-between decisions and custom types via overrides. Use when the user says "deep recon", "research this", "draft a research prompt", "process this research report", "market research", "domain research", "technical research", "competitor research", "literature review", or "help me choose between".

majiayu000 Bundle

Wiring Verification

majiayu000 Bundle

This skill standardizes the end-to-end Horus voice workflow using uvx-style

majiayu000 Bundle

Meta-skill for internal codebase exploration at varying depths (quick/deep/architecture)

majiayu000 Bundle

Expert knowledge synthesizer specializing in extracting insights from multi-agent interactions, identifying patterns, and building collective intelligence. Masters cross-agent learning, best practice extraction, and continuous system improvement through knowledge management.

majiayu000 Bundle

Capture each prompt into Graphiti memory (episodes) for this repo/user.

majiayu000 Bundle

Add Ollama MCP server so the container agent can call local models and optionally manage the Ollama model library.

majiayu000 Bundle

Orchestrate Agent Teams for parallel multi-session collaboration. Use for research, implementation, review, and debug workflows requiring independent teammates.

majiayu000 Bundle

Use to conduct STRIDE threat modeling for a system or feature design.

majiayu000 Bundle

Run Codex CLI, Claude Code, OpenCode, or Pi Coding Agent via background process for programmatic control.

majiayu000 Bundle

Use only when the user explicitly invokes `$ralph-specum`, requests Ralph Specum in Codex, asks Ralph Specum to handle a named phase, or explicitly requests autonomous or quick mode or continuation without pauses.

majiayu000 Bundle

Embody this digital identity. Read SOUL.md first, then STYLE.md, then examples/. Become the person—opinions, voice, worldview.

majiayu000 Bundle

Connect to MotherDuck from any application. Use when setting up database connectivity via the Postgres endpoint (recommended), pg_duckdb, native DuckDB API, or JDBC. Covers connection strings, authentication, SSL, and environment variable configuration.

majiayu000 Bundle

Discover and explore databases, tables, columns, and data shares in MotherDuck. Use when you need to understand what data is available, preview table contents, or search the data catalog.

majiayu000 Bundle

Transcribe audio via OpenAI Audio Transcriptions API (Whisper).

majiayu000 Bundle

Iteratively optimizes prompts for token efficiency by maximizing information density - reduces verbosity, removes redundancy, tightens phrasing while preserving semantic content. Use when asked to compress, shorten, reduce tokens, tighten, maximize density, increase information density, or make a prompt more concise.

majiayu000 Bundle

<ONBOARD> Use on first session in a project, or when user asks for codebase overview. Creates persistent glossary, architecture maps, and decision records to solve agent amnesia.

majiayu000 Bundle

Decide when DuckLake is the right MotherDuck storage pattern. Use when evaluating fully managed DuckLake, BYOB, own-compute DuckLake access, data inlining, object-storage layout, or file-aware maintenance instead of native MotherDuck storage.

majiayu000 Bundle

Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots use seaborn; for interactive plots use plotly; for publication-ready multi-panel figures with journal styling, use scientific-visualization.

majiayu000 Bundle

Create and configure Claude Code sub-agents with custom prompts, tools, and models

majiayu000 Bundle

Helps users discover and install agent skills when they ask questions like "how do I do X", "find a skill for X", "is there a skill that can...", or express interest in extending capabilities. This skill should be used when the user is looking for functionality that might exist as an installable skill.

majiayu000 Bundle

Expert NLP engineer specializing in natural language processing, understanding, and generation. Masters transformer models, text processing pipelines, and production NLP systems with focus on multilingual support and real-time performance.

majiayu000 Bundle

Walk the operator through creating the first NanoClaw agent for a DM channel — resolve the operator's channel identity, wire the DM messaging group to a new agent, and trigger a welcome DM via the normal delivery path. Use after channel credentials are configured and the service is running.