Life Science Research

Life Science Research from coderabbitai/codex-plugin.

by @coderabbitai 8 skills

Skills in this plugin

8
  1. Encode Skill · coderabbitai bundle
    Submit compact ENCODE REST API requests for object lookups, portal-style search, and metadata retrieval. Use when a user wants concise ENCODE summaries
    1 install
  2. Quickgo Skill · coderabbitai bundle
    Submit compact QuickGO requests for GO terms, annotations, and ontology traversal. Use when a user wants concise QuickGO summaries
    1 install
  3. Pharmgkb Skill · coderabbitai bundle
    Submit compact PharmGKB API requests for genes, variants, clinical annotations, dosing guidelines, and search. Use when a user wants concise PharmGKB summaries
    1 install
  4. Rnacentral Skill · coderabbitai bundle
    Submit compact RNAcentral API requests for RNA entry browsing, single-entry lookup, and cross-reference retrieval. Use when a user wants concise RNAcentral summaries
    1 install
  5. Ncbi Entrez Skill · coderabbitai bundle
    Submit compact NCBI Entrez E-Utilities requests for PubMed, Gene, Protein, Nucleotide, PMC metadata, and GEO metadata workflows. Use when a user wants concise Entrez search, fetch, summary, or link results; save raw JSON or XML only on request.
    1 install
  6. Ncbi Datasets Skill · coderabbitai bundle
    Submit compact NCBI Datasets v2 requests for assembly, genome, taxonomy, and related metadata endpoints. Use when a user wants concise NCBI Datasets summaries; save raw JSON or text only on request.
    1 install
  7. Eqtl Catalogue Skill · coderabbitai bundle
    Submit compact eQTL Catalogue API requests for association retrieval and documented metadata endpoints. Use when a user wants concise public eQTL Catalogue summaries
    1 install
  8. Locus To Gene Mapper Skill · coderabbitai bundle
    Map GWAS loci to ranked candidate genes using a deterministic multi-skill chain (EFO -> GWAS -> coordinates -> Open Targets L2G/coloc -> eQTL -> burden/coding context), with reproducible tables and optional figures. Use when a user provides a trait/EFO term and/or lead variants and needs locus-to-gene prioritization for downstream biology decisions.
    1 install