Results for “g-suite”

Run tests and systematically fix all failing tests using smart error grouping. Use when user asks to fix failing tests, mentions test failures, runs test suite and failures occur, or requests to make tests pass.

Run NVIDIA garak probe suites against an LLM endpoint to test for jailbreaks, prompt injection, data leakage, and toxic generation, then interpret the hit-rate report for triage and reporting.

Query the Monarch Initiative knowledge graph for disease-gene-phenotype associations across species, integrating OMIM, ORPHANET, HPO, ClinVar, and model organism databases. Use when discovering rare disease genes, mapping phenotypes to genes, modeling disease across species, or looking up HPO terms. Part of the AlterLab Academic Skills suite.

Provides a formal evaluation framework for Claude Code sessions, implementing eval-driven development (EDD) principles to define pass/fail criteria, measure reliability with pass@k metrics, and create regression test suites.

Set up and run mutation testing (StrykerJS / mutmut) to measure whether tests assert behavior, not just execute lines. Use when "add mutation testing", "are our tests real", "can our test suite be gamed", or after an agent bulk-generated tests. Coverage plan → plan-test-coverage. Writing tests → test-unit.

Nonlinear dimensionality reduction with UMAP — fast manifold learning for 2D/3D visualization, clustering preprocessing (e.g., HDBSCAN), and supervised or parametric UMAP. Use when projecting high-dimensional data to low dimensions for visualization, embedding generation, or as a preprocessing step before clustering. Part of the AlterLab Academic Skills suite.

Creates cross-platform agent skills from workflow descriptions, files, URLs, or screenshots. Supports single skills, multi-agent suites, template-based creation, cross-platform export, spec validation, and security auditing of third-party skills before install.

Product orchestrator for Prodig Suites that guides product planning, routes work to specialists, and coordinates execution across the product lifecycle. Use when the user is shaping a digital product, deciding next steps, or needs help choosing the right Prodig specialist or workflow. Triggers: 'prodig', 'digital product', 'product idea', 'product planning', 'which product agent should I use', 'SaaS planning', 'course creation', 'template pack', 'productized service'.

Knowledge-graph-augmented retrieval. Entity and triple extraction, graph construction (Neo4j, LlamaIndex PropertyGraphIndex), hierarchical community summarization (Microsoft GraphRAG), personalized PageRank (HippoRAG), multi-hop traversal retrieval, and hybrid graph + vector pipelines. USE WHEN: user mentions "GraphRAG", "HippoRAG", "knowledge graph RAG", "entity extraction", "multi-hop reasoning", "Neo4j RAG", "LlamaIndex property graph", "LangChain graph retriever", "triple extraction", "community summarization" DO NOT USE FOR: vanilla vector RAG - use `rag-patterns`; multimodal inputs - use `multimodal-rag`; production indexing ops - use `rag-production`; hallucination checks - use `rag-guardrails`

Caching strategies across the RAG stack. Semantic caching with GPTCache and LangChain, Redis-based embedding-similarity cache, cache key design, TTL/invalidation, partial caching (cache retrieval only), provider-native prompt caching (Anthropic, OpenAI), and hierarchical L1/L2 caches. USE WHEN: user mentions "semantic cache", "GPTCache", "LLM cache", "prompt caching", "Redis vector cache", "cache invalidation for RAG", "reduce LLM cost", "latency reduction LLM" DO NOT USE FOR: retrieval accuracy - use `rag-patterns`; groundedness checks - use `rag-guardrails`; incremental indexing - use `rag-production`

Fine-tune open models or Gemini models using Agent Platform infrastructure, from environment setup through data preparation, job configuration, monitoring, and deployment.

Gemini CLI one-shot prompts, summaries, generation, skills, hooks, MCP, or Gemma routing.

GPG (GNU Privacy Guard) encryption and signing reference. Covers key generation (Ed25519/RSA), export/import, keyservers, file encryption (symmetric + asymmetric), git commit signing, detached signatures, gpg-agent caching, SSH via GPG, and pass password manager.

Gemini CLI one-shot prompts, summaries, generation, skills, hooks, MCP, or Gemma routing.

GPG (GNU Privacy Guard) encryption and signing reference. Covers key generation (Ed25519/RSA), export/import, keyservers, file encryption (symmetric + asymmetric), git commit signing, detached signatures, gpg-agent caching, SSH via GPG, and pass password manager.

Train a personalized identity model on a person's face for use in Higgsfield's image and video generation.

Use the Gemini CLI for one-shot Q&A, summarization, and generation tasks. Trigger when Gemini-specific CLI usage, model selection, or JSON-formatted output is needed.

画像を理解（被写体・テキストOCR・構図・色・UI構造の分析）し、結果を構造化して返すスキル。CC CLI は GLM-5.3 等の vision 非対応モデルで稼働中のため画像を直接視認できず、主ルート Gemini 2.5 Flash（scripts/api/gemini_vision.py・無料枠）と副ルート 4_5v MCP（analyze_image・Readが返すCDN URL）の2経路で分析し、CCは結果の構造化・比較・保存に専任する。 ユーザーが「画像見て」「この画像何が写ってる」「画像比較して」「スクショ見て」「画像分析して」「画像理解」「vision-analyze」と言った時、または /vision-analyze を呼んだ時にトリガー。 ※画像生成（image generation）は対象外（make-song / video-prompt-spec / demo-site-sales参照）。ピクセル修正（花鈿除去等）は remove-huadian の役割。楽曲分析は analyze-song / reverse-engineer-song。

Generates images and conducts conversations through the Gemini website (gemini.google.com) using MCP tools, scripts, or a managed browser as a fallback.

Orchestrator for the eval-output skill suite — evaluate LLM and agent outputs for quality, accuracy, helpfulness, and safety using structured rubrics and LLM-as-judge techniques. Load when the user says "evaluate this output", "score this response", "run an eval", "LLM as judge", "evaluate agent output", "how good is this response", "rate this answer", "eval this", or provides an LLM output that should be assessed for quality. Single entry point for all output evaluation workflows.

Scales reinforcement learning with PufferLib — high-throughput parallel training (PuffeRL), vectorized environments, and native multi-agent systems achieving 2-10x speedups over standard implementations. Use when scaling RL to millions of steps per second, running vectorized or multi-agent setups, building custom PufferEnv tasks, or integrating game environments (Atari, Procgen, NetHack, PettingZoo). For standard single-agent algorithm implementations (PPO/SAC/DQN) or quick prototyping prefer alterlab-stable-baselines3. Part of the AlterLab Academic Skills suite.

Run full computational-pathology workflows with PathML — whole-slide-image (WSI) analysis across 160+ slide formats, multiplexed immunofluorescence (CODEX, Vectra, MERFISH), nucleus segmentation/classification (HoVer-Net, HACTNet), tissue- and cell-graph construction, HDF5 dataset management, and deep-learning model training on pathology data. Use when the user builds end-to-end deep-learning pathology pipelines, analyzes multiplexed or spatial-proteomics slides, or segments nuclei. For lightweight H&E slide preprocessing, tissue masking, or plain Random/Grid/Score tile extraction prefer alterlab-histolab instead. Part of the AlterLab Academic Skills suite.

Extract and preprocess tiles from whole-slide images (WSI) with histolab — OpenSlide-backed slide loading, tissue detection and masks, Random/Grid/Score tile extraction, and image/morphological filters for H&E preprocessing. Use when the user needs lightweight WSI slide preprocessing — building tile datasets for ML training, tissue segmentation, or quick tile-based inspection of histopathology slides. For end-to-end computational-pathology, deep-learning model training, nucleus segmentation, or multiplexed/spatial-proteomics (CODEX, Vectra) pipelines prefer alterlab-pathml instead. Part of the AlterLab Academic Skills suite.

Featurizes molecules for machine learning with molfeat (100+ featurizers) — ECFP/MACCS/MAP4 fingerprints, RDKit and Mordred physicochemical descriptors, and pretrained embeddings (ChemBERTa, ChemGPT, GIN) exposed as scikit-learn transformers that convert SMILES into feature vectors. Use when turning molecules into ML-ready feature matrices for QSAR/QSPR or virtual screening, or benchmarking fingerprint against descriptor and embedding representations; for training models and MoleculeNet benchmarks on those features prefer alterlab-deepchem, and for low-level fingerprint or descriptor primitives prefer alterlab-rdkit. Part of the AlterLab Academic Skills suite.

Predict genome-wide functional genomics tracks from DNA sequence with Borzoi (Linder 2025) — a sequence-to-function model outputting RNA-seq, CAGE, ATAC, and ChIP coverage across long context, used to score non-coding and regulatory variant effects. Use when predicting functional tracks from a DNA sequence, scoring a non-coding/regulatory variant's effect on expression or chromatin, or doing in-silico mutagenesis of a locus. To LOOK UP a variant's population frequency prefer alterlab-gnomad; for its clinical significance prefer alterlab-clinvar; for protein-structure effects prefer alterlab-alphafold; for single-cell foundation models prefer alterlab-scgpt. Part of the AlterLab Academic Skills suite.

Predict biomolecular complexes with Chai-1, an open AlphaFold3-style model that folds multi-entity assemblies (proteins, ligands, nucleic acids) from a single typed FASTA — strong on antibody–antigen and protein–ligand complexes, with optional MSA and restraint inputs. Use when predicting an antibody–antigen complex, folding a mixed protein/ligand/nucleic-acid assembly described in one FASTA, or generating a complex with experimental restraints. For binding-affinity prediction or a ligand-focused co-fold prefer alterlab-boltz; for protein-only or protein–protein folding prefer alterlab-alphafold; to dock into a fixed receptor prefer alterlab-diffdock. Part of the AlterLab Academic Skills suite.

Simulator.Company digital-twin & actor-agent specialist — talk to an agent AS an agent and delegate work to it. An agent is ANY actor whose `description` holds an "# Agent" competency profile (what it does, what it knows, whether it fits a task). The common case is a person: every workspace user has a 1:1 twin actor (`systemObjType="user"`) carrying that profile. But any actor can be an agent — a service/bot twin, a team or department, an organization, a process. This skill discovers the agent (`findAgent`), loads its profile (`getAgent`), adopts it as the persona, then either does the task, finds a better-suited agent, or hands the decision to the user (for a person: a task or a p2p message; for a non-person: propose another executor or run/trigger it as an actor). It is the actor-analog of `simulator-skills` (the `Skills`-form registry), but the registry is the workspace's agent actors. Use when the user wants to "delegate", "assign this to <someone/something>", "can <X> do this", "who/what should do this",