Results for “gnomad”

22 skills

Alterlab Borzoi

Predict genome-wide functional genomics tracks from DNA sequence with Borzoi (Linder 2025) — a sequence-to-function model outputting RNA-seq, CAGE, ATAC, and ChIP coverage across long context, used to score non-coding and regulatory variant effects. Use when predicting functional tracks from a DNA sequence, scoring a non-coding/regulatory variant's effect on expression or chromatin, or doing in-silico mutagenesis of a locus. To LOOK UP a variant's population frequency prefer alterlab-gnomad; for its clinical significance prefer alterlab-clinvar; for protein-structure effects prefer alterlab-alphafold; for single-cell foundation models prefer alterlab-scgpt. Part of the AlterLab Academic Skills suite.

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Search local documents, files, notes, and knowledge bases. Index directories, search with BM25/vector/hybrid, get AI answers with citations. Use when user wants to search files, find documents, query notes, look up information in local folders, index a directory, set up document search, build a knowledge base, needs RAG/semantic search, or wants to start a local web UI for their docs.

List available NVIDIA NIM models and their status

Submit an inference job to NVIDIA NIM and return a job ID

Index local folders and search documents with BM25, vector, or hybrid queries, plus AI answers with citations and a web UI.

Nemo Guardrails

NVIDIA's runtime safety framework for LLM applications. Features jailbreak detection, input/output validation, fact-checking, hallucination detection, PII filtering, toxicity detection. Uses Colang 2.0 DSL for programmable rails. Production-ready, runs on T4 GPU.

Authors and updates customization overrides for installed BMad skills. Use when the user says 'customize bmad', 'override a skill', 'change agent behavior', or 'customize a workflow'.

Audits natural-language programming artifacts such as SKILL.md, AGENTS.md, CLAUDE.md, slash commands, plugin manifests, hooks, rules, and prompt files. Use when reviewing AI-agent repositories, checking manifest-vs-disk consistency, scoring skill or agent quality, adding NL artifact CI gates, or diagnosing vocabulary and version drift across Claude Code, Codex, Cursor, Gemini, and Antigravity-style projects.

Nemo Guardrails

NVIDIA's runtime safety framework for LLM applications. Features jailbreak detection, input/output validation, fact-checking, hallucination detection, PII filtering, toxicity detection. Uses Colang 2.0 DSL for programmable rails. Production-ready, runs on T4 GPU.

Nemotron Policy Generator

Generates custom safety policies for NVIDIA Nemotron content-safety guardrails, producing a Markdown policy, JSON taxonomy, and inference prompts from rough user input.

Build applications with Gemini API hosted models, including Gemini and Gemma 4, using multimodal content, function calling, structured outputs, and current SDKs for Python, JavaScript, Go, and Java.

Search local documents, files, notes, and knowledge bases. Index directories, search with BM25/vector/hybrid, get AI answers with citations. Use when user wants to search files, find documents, query notes, look up information in local folders, index a directory, set up document search, build a knowledge base, needs RAG/semantic search, or wants to start a local web UI for their docs.

This skill should be used when working with BMAD (BMad-CORE) v6-alpha projects. BMAD is a universal human-AI collaboration platform with specialized modules for software development (BMM), agent building (BMB), creative intelligence (CIS), and project management (BMD). Use this skill to understand agent workflows, command patterns, scale-adaptive methodology, and effective utilization of the four-phase development system.

Index local folders and search documents with BM25, vector, or hybrid queries, plus AI answers with citations and a web UI.

Turn raw ideas into one clear pre-planning concept artifact by choosing the right framing mode: problem framing, audience and value framing, concept shaping, game concept framing, or story packaging. Use when the user needs the next artifact before PRDs, sprint plans, launch execution, or game-production routing.

N coordinated agents on shared task list using Claude Code implicit agent teams

Jailbreak LLMs: Parseltongue, GODMODE, ULTRAPLINIAN.

johnalbertini14-glitch

Persistent memory CLI for LLM agents. Store facts, recall past knowledge, link related memories, manage lifecycle.

Generates NeMo Guardrails Colang (.co) files and YAML config blocks from a plain-language description of a chatbot's purpose, allowed behaviors, and constraints. Use this skill whenever a user wants to build guardrails for a chatbot, define allowed intents for an LLM, create an AI firewall with NeMo Guardrails, generate Colang flow definitions, or configure a semantic allow-list for a bot. Trigger this skill even when the user just describes what their bot should and shouldn't do — generating the Colang and YAML is almost always what they need next.

johnalbertini14-glitch

Index local folders and search documents with BM25, vector, or hybrid queries, plus AI answers with citations and a web UI.

Glamm Pixel Grounding Large Multimodal Model Arxiv 2311 0335

GLaMM: Pixel Grounding Large Multimodal Model

DeepClaw - Autonomous Agent Network