Results for “ncbi-taxonomy”

Finetunes the NV-Generate-CTMR MR-brain diffusion UNet from user-supplied NIfTI training volumes using a wrapper that stages configs and delegates to upstream scripts.

Runs NV-Segment-CTMR segmentation on CT or MRI NIfTI volumes and records label-map evidence.

Fine-tune NV-Segment-CT VISTA3D on CT NIfTI labels for smoke testing or dataset adaptation, wrapping the upstream MONAI bundle entrypoint.

Runs chest X-ray reasoning smoke tests using the NV-Reason-CXR-3B model via local inference or a public Hugging Face Space API.

Segments abdominal organs from CT NIfTI volumes using the NV-Segment-CT VISTA3D model, producing label maps and structured evidence JSON.

Generates synthetic brain MRI volumes using NVIDIA's NV-Generate-CTMR workflow, with configurable modality and random seed.

Finetune the NV-Generate-CTMR MAISI VAE/autoencoder on user-supplied CT or MRI NIfTI volumes using a staged config and datalist workflow.

Predicts tissue or cell-type gene expression (log TPM and TPM) from a TSS-centered DNA sequence using the hosted Genomic Intelligence G0 Expression model, conditioned on a free-text cell-type description.

Provides deep generative models for single-cell omics analysis, including probabilistic batch correction, transfer learning, differential expression, and multi-modal integration.

Predicts gene and transcript structure from a DNA sequence using the hosted Genomic Intelligence API, producing a report and JSON output.

Filters and prioritizes compound libraries in drug discovery using drug-likeness rules, structural alerts, complexity metrics, and a query language.

Detect promoter regions in DNA sequences by calling the Genomic Intelligence G0 transformer (GENA-LM BERT Large) hosted API. Returns per-window promoter probabilities and called regions as a report and JSON, from a single FASTA input.