Results for “cobrapy”

Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.

Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.

Modelagem metabólica baseada em restrições (COBRA). FBA, FVA, knockouts de genes, amostragem de fluxo, modelos SBML, para análise de biologia de sistemas e engenharia metabólica.

Develop quantitative trading strategies with the vn.py framework, covering CTA, spread, and options strategies with support for 20+ broker gateways.

Provides guidance on using the Astropy library for astronomy and astrophysics workflows, including units, coordinates, FITS I/O, tables, time, WCS, and cosmology.

Provides guidance for using SymPy for exact symbolic mathematics in Python, covering algebra, calculus, equation solving, linear algebra, physics, and code generation.

Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.

Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.

Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.

Use for writing, reviewing, debugging, testing, or validating Python mpmath arbitrary-precision numerical code. Trigger on mpf, mpc, mp.dps, workdps, interval arithmetic, high-precision quadrature, root finding, special functions, matrices, inverse transforms, or precision/convergence failures. Do not use for ordinary NumPy vectorization, SymPy symbolic manipulation, decimal currency arithmetic, or machine-float code with no precision requirement.

Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.

VIPER v2.1 — Range-bound liquidity sniper. Enters at support/resistance when Bollinger Bands are tight, ATR is low, RSI is at extremes within the range, and volume is declining. Works when nothing is trending — the chop predator. USD-weighted OI filtering (min $5M). DSL High Water Mode (mandatory). 5-minute scan interval. Second-best performer in the Senpi zoo at +6.2% ROI.

Python video composition with moviepy 2.x — overlaying deterministic text on AI-generated video (LTX-2, SadTalker), compositing clips, single-file build.py video projects. Use when adding labels/captions/lower-thirds to LTX-2 or SadTalker outputs, building short ad-style spots in pure Python without Remotion, or doing programmatic video composition. Triggers include text overlay on video, label LTX-2 clip, caption SadTalker output, lower third, build.py video, moviepy, Python video composition, sub-30s ad spot.

Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and...

Use esta competência ao trabalhar com matemática simbólica em Python. Esta competência deve ser usada para tarefas de computação simbólica incluindo resolução de equações algebraicamente, realização de operações de cálculo (derivadas, integrais, limites), manipulação de expressões algébricas, trabalho com matrizes simbolicamente, cálculos de física, problemas de teoria dos números, computações de geometria e geração de código executável a partir de expressões matemáticas. Aplique esta competência quando o usuário precisa de resultados simbólicos exatos em vez de aproximações numéricas, ou ao trabalhar com fórmulas matemáticas que contêm variáveis e parâmetros.

Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.

COBRA v1.1 — Arena Sprint Predator. Trades the single most dominant SM asset with maximum conviction. Fee-optimized maker orders. Wider DSL lets positions breathe. Designed to win Arena weeks.

Codex Pet generator on RunComfy. Build a Codex-compatible Codex Pet spritesheet.webp + pet.json from a single reference image, drop it into `${CODEX_HOME:-$HOME/.codex}/pets/<name>/` and Codex picks it up as a custom Codex Pet next to the 8 built-ins. This skill produces the exact Codex Pet atlas Codex expects (1536x1872 PNG/WebP, 8 cols x 9 rows, 192x208 cells, 9 animation states — idle, running-right, running-left, waving, jumping, failed, waiting, running, review). Calls OpenAI GPT Image 2 edit ONCE via the local RunComfy CLI as `runcomfy run openai/gpt-image-2/edit` to produce a canonical Codex Pet pose, then assembles all 9 animation rows programmatically with ImageMagick micro-transforms — no Codex Pro, no `$imagegen`, no OPENAI_API_KEY required, only RUNCOMFY_TOKEN. Triggers on "codex pet", "create codex pet", "make codex pet", "hatch codex pet", "/hatch image", "desktop pet codex", "codex pets", "spritesheet.webp", or any explicit ask to build a custom pet for OpenAI Codex.

Codex Pet generator on RunComfy. Build a Codex-compatible Codex Pet spritesheet.webp + pet.json from a single reference image, drop it into `${CODEX_HOME:-$HOME/.codex}/pets/<name>/` and Codex picks it up as a custom Codex Pet next to the 8 built-ins. This skill produces the exact Codex Pet atlas Codex expects (1536x1872 PNG/WebP, 8 cols x 9 rows, 192x208 cells, 9 animation states — idle, running-right, running-left, waving, jumping, failed, waiting, running, review). Calls OpenAI GPT Image 2 edit ONCE via the local RunComfy CLI as `runcomfy run openai/gpt-image-2/edit` to produce a canonical Codex Pet pose, then assembles all 9 animation rows programmatically with ImageMagick micro-transforms — no Codex Pro, no `$imagegen`, no OPENAI_API_KEY required, only RUNCOMFY_TOKEN. Triggers on "codex pet", "create codex pet", "make codex pet", "hatch codex pet", "/hatch image", "desktop pet codex", "codex pets", "spritesheet.webp", or any explicit ask to build a custom pet for OpenAI Codex.