Results for “gget”

Kit de ferramentas CLI/Python para consultas rápidas de bioinformática. Preferido para buscas BLAST rápidas. Acesso a 20+ bancos de dados: informações de genes (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, downloads de genoma. Para BLAST avançado/processamento em lote, use biopython. Para integração multi-banco de dados, use bioservices.

Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold structures, enrichment analysis. Best for interactive exploration, simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bioservices.

Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST/BLAT, viral sequence downloads, AlphaFold structures, enrichment analysis, OpenTargets, COSMIC, CELLxGENE, and 8cube mouse specificity/expression data. Best for interactive exploration and simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bioservices.

Facilitates a read-only standup across git worktrees, branches, or PRs to compare changes and produce one consolidation plan.

Use only when the user explicitly asks to stage, commit, push, and open a GitHub pull request in one flow using the GitHub CLI (`gh`).

Create a git branch following Sentry naming conventions, automatically deriving the branch type and description from current work context.

Use only when the user explicitly asks to stage, commit, push, and open a GitHub pull request in one flow using the GitHub CLI (`gh`).

Optimize for AI recommendations so ChatGPT, Claude, and Perplexity suggest your brand first.

Generates unit tests for code changed in the current branch by comparing against origin/main and following existing test conventions.

Initialize a Git repository with an initial commit

Designs and implements enterprise GitOps workflows: branching strategies, release automation, semantic versioning, conventional commits, and git hooks.

Use only when the user explicitly asks to stage, commit, push, and open a GitHub pull request in one flow using the GitHub CLI (`gh`).

Configure Gemini and Codex CLI tools with Cloudflare AI Gateway endpoints and MCP servers.

Use only when the user explicitly asks to stage, commit, push, and open a GitHub pull request in one flow using the GitHub CLI (`gh`).

Use only when the user explicitly asks to stage, commit, push, and open a GitHub pull request in one flow using the GitHub CLI (`gh`).

Use only when the user explicitly asks to stage, commit, push, and open a GitHub pull request in one flow using the GitHub CLI (`gh`).

当用户明确要求“解决当前 merge / rebase / cherry-pick 冲突、提交代码、创建 commit、把改动分批提交并 push、推送当前分支”时使用。进行中的冲突要先识别 Git 操作和双方原始意图，逐 hunk 做语义合并并运行项目检查，再经用户确认继续操作；普通改动要检查敏感信息与异常差异，拆成可运行、可审查、可回滚的原子提交后确认提交和推送。不得自动发起或中止 merge / rebase / cherry-pick，不得强推或随意改写已发布历史。不要用于普通改动尚未完成或验证失败、只想查看 Git 状态，或要创建 PR 的场景。

Gates a git branch before merge by running code review, security, test, and accessibility passes on the diff, then emits a single verdict.

Provides common Git commands for syncing forks, stashing changes, managing branches, undoing changes, and rolling back commits.

Inspect local git state, commit changes, and branch into isolated worktrees for speculative work.

Git workflows, branching strategies, and hooks.

Runs high-performance genomic interval analysis with gtars (databio), a Rust toolkit with Python bindings — the performance-critical backend for the geniml ML library. Use when computing overlaps/jaccard/coverage between BED region sets, indexing intervals with IGD, generating uniwig accumulation/coverage tracks, tokenizing genomic regions for ML, splitting single-cell fragments into pseudobulks, or computing GA4GH refget sequence digests. NOT for training region embeddings (use alterlab-geniml) or non-genomic spatial joins (use alterlab-geopandas). Part of the AlterLab Academic Skills suite.

Creates atomic git commits with terse, exact Conventional Commits messages, splitting changes by concern and staging files individually.