Results for “fva”

Extracts and analyzes malicious VBA macros, XLM macros, DDE, and remote template injections in Microsoft Office documents using olevba, oledump, and deobfuscation techniques to identify download cradles, payload execution, and persistence mechanisms.

Computes phylogenetic distance matrices and trees from genomic VCF or FASTA data using the fastreeR hybrid Java/Python toolkit.

Create data-driven charts with Vega-Lite and Vega, covering bar, line, scatter, heatmap, area, radar, and word cloud visualizations from structured data arrays.

Parse and write FCS (Flow Cytometry Standard) files v2.0-3.1 with FlowIO — extract event data as NumPy arrays, read $-keyword metadata and channel/parameter definitions, and convert events to CSV or pandas DataFrame. Use when loading raw .fcs flow-cytometry files, inspecting channels and metadata, or preprocessing cytometry data for downstream gating and analysis. Part of the AlterLab Academic Skills suite.

Perform constraint-based metabolic modeling with COBRApy: run FBA, FVA, gene knockouts, flux sampling, and manage SBML models for systems biology and metabolic engineering.