Results for “h5”
6 skillsanndata
Manages annotated data matrices for single-cell genomics, covering creation, I/O, concatenation, and manipulation of AnnData objects in h5ad and zarr formats.
253 · bundle
scanpy
Runs standard single-cell RNA-seq analysis with Scanpy, covering QC, normalization, dimensionality reduction, clustering, marker identification, visualization, and conversion of R single-cell formats to h5ad.
253 · bundle
More results
cupynumeric-hdf5
Read and write large cuPyNumeric arrays to HDF5 files using Legate's parallel, distributed HDF5 I/O.
2.2k · bundle
file-hasher
Compute, verify, and compare file hashes using MD5, SHA-1, SHA-256, SHA-512, and more. Use when checking file integrity, verifying downloads against expected checksums, comparing files for equality, generating checksums for directories, hashing strings, or validating checksum files (sha256sum/md5sum format). Supports.
10 · bundle
scanpy
Analyze single-cell RNA-seq data with Scanpy, covering quality control, normalization, clustering, marker gene identification, visualization, and trajectory analysis.
3
anndata
Create, read, manipulate, and store annotated data matrices using the AnnData Python package, designed for single-cell genomics and general-purpose annotated data workflows.
30.2k · bundle