Results for “part-number”

Access NCBI GEO (Gene Expression Omnibus) for gene expression and functional genomics data — search and download microarray and RNA-seq datasets by GSE, GSM, GPL, or GDS accession and retrieve SOFT, MINiML, and series matrix files. Use when locating public expression datasets, fetching processed expression matrices, downloading a study's supplementary files, or sourcing per-study transcriptomics data for differential-expression analysis. For raw FASTQ sequencing reads by SRA/ENA run accession use alterlab-ena; for reference tissue-expression baselines (median TPM across human tissues) use alterlab-gtex; for cancer cohort somatic mutations and copy-number use alterlab-cbioportal. Part of the AlterLab Academic Skills suite.

Segments abdominal organs from CT NIfTI volumes using the NV-Segment-CT VISTA3D model, producing label maps and structured evidence JSON.

Oracle Database specific features. Covers data types, sequences, synonyms, partitioning, and Oracle-specific SQL syntax. Use for Oracle database work. USE WHEN: user mentions "oracle", "oracle database", "sequences", "synonyms", "DUAL", "SYSDATE", "NVL", "DECODE", "Oracle partitioning", "Oracle specifics" DO NOT USE FOR: PostgreSQL - use `postgresql` instead, SQL Server - use `sqlserver` instead, PL/SQL programming - use `plsql` instead

Provides SQL window function examples for ranking, aggregation, lag/lead, value extraction, frame specifications, and advanced analytics.

Reference for MariaDB numeric and math functions, covering rounding, division, powers, logs, trigonometry, randomness, base conversion, checksums, and formatting, with guidance on exact-vs-approximate types and division-by-zero behavior.

Perform fast genomic interval operations (overlap, nearest, merge, coverage, cluster, complement, subtract, count-overlaps), multi-format bioinformatics I/O, DataFusion SQL, and pileup on Polars DataFrames via the polars-bio library, serving as a scalable alternative to bioframe and bedtools.

Provides a pre-built Salesforce Party Model data model template with Mermaid diagrams, object tables, and relationship summaries for Industry Clouds.

Query cBioPortal via its keyless REST API for cancer genomics across TCGA, GENIE, MSK-IMPACT and hundreds of studies — somatic mutations, copy-number alterations (GISTIC), mRNA/protein expression, structural variants, and patient-level clinical/survival data. Use when asked how often a gene is mutated/amplified/deleted in a tumor type, to profile oncogenes or tumor suppressors across cancers (pan-cancer alteration frequency), to pull patient-level mutations joined to OS/clinical outcomes, or to validate a cancer target from cohort genomics. For germline variant pathogenicity use alterlab-clinvar; for mutational-signature (SBS) decomposition use alterlab-cosmic; for CRISPR/RNAi gene-dependency use alterlab-depmap; for aggregated target-disease evidence use alterlab-opentargets. Part of the AlterLab Academic Skills suite.