Results for “path-traversal”
5 skillspathml
Loads and processes whole-slide pathology images, builds spatial graphs, trains deep learning models, and analyzes multiplexed immunofluorescence data across 160+ slide formats.
253 · bundle
pacsomatic
Validates inputs, generates samplesheets and launch scripts, and optionally executes nf-core/pacsomatic matched tumor-normal workflows from BAM files, supporting local runs and scheduler submission (LSF/Slurm/PBS/SGE).
30.2k · bundle
pathml
Analyze whole-slide pathology images with Python: load 160+ slide formats, preprocess H&E stains, segment nuclei, construct spatial graphs, train ML models, and process multiplex immunofluorescence data (CODEX, Vectra).
30.2k · bundle
pathway-supabase
Pulls pathway, book, course, article, and content item records from a Supabase database for the alan-hirsch tenant, organizes them by portal, and exports the results as markdown files into a local docs repository.
1
pathway-collector
Scans local repositories and a Supabase database to inventory all pathway, portal, and theme content, producing a categorized report organized by portal.
1