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Results for “deseq2”

6 skills
k-dense-ai
Bulk Rnaseq
Orchestrates a complete bulk RNA-seq differential-expression study from raw FASTQ reads through QC, alignment, quantification, differential expression, pathway enrichment, and publication figures.
30.2k · bundle
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k-dense-ai
Pydeseq2
Perform differential gene expression analysis for bulk RNA-seq data using PyDESeq2, supporting formulaic designs, Wald tests, FDR correction, LFC shrinkage, and result visualization.
30.2k · bundle
gabrielmoreira
Rnaseq De
Performs differential expression analysis on bulk RNA-seq or pseudo-bulk count matrices with QC, PCA, and contrast testing.
17 · bundle
mukul975
Detecting Beaconing Patterns With Zeek
Analyzes Zeek conn.log connection intervals using statistical methods to detect C2 beaconing patterns, flagging periodic connections with low jitter.
24.6k · bundle
gabrielmoreira
Proteomics De
Performs differential expression analysis on label-free quantitative (LFQ) proteomics data from MaxQuant and DIA-NN outputs, including preprocessing, imputation, statistical testing, and visualization.
17 · bundle
qhjqhj00
Jq
Query, filter, transform, and aggregate JSON data using jq, with practical patterns for shell pipelines and integration with CLI tools.
3 · bundle