Plugins
1 pluginResults for “express”
15 skillsPydeseq2
Perform differential gene expression analysis for bulk RNA-seq data using PyDESeq2, supporting formulaic designs, Wald tests, FDR correction, LFC shrinkage, and result visualization.
30.2k · bundle
Rnaseq De
Performs differential expression analysis on bulk RNA-seq or pseudo-bulk count matrices with QC, PCA, and contrast testing.
17 · bundle
Proteomics De
Performs differential expression analysis on label-free quantitative (LFQ) proteomics data from MaxQuant and DIA-NN outputs, including preprocessing, imputation, statistical testing, and visualization.
17 · bundle
Bulk Rnaseq
Orchestrates a complete bulk RNA-seq differential-expression study from raw FASTQ reads through QC, alignment, quantification, differential expression, pathway enrichment, and publication figures.
30.2k · bundle
Polars
Process tabular data with Polars' expression API, lazy evaluation, and parallel execution for faster pandas-style workflows.
2
Gget
Queries 20+ bioinformatics databases from the command line or Python for gene info, sequences, BLAST/BLAT, protein structures, viral data, and expression metrics.
253 · bundle
More results
Polars
Process tabular data with Polars' expression API, lazy evaluation, and parallel execution for fast in-memory analysis and pandas migration.
0 · bundle
Scanpy
Run standard single-cell RNA-seq analysis pipelines: QC, normalization, dimensionality reduction, clustering, differential expression, and visualization using Scanpy.
30.2k · bundle
Arboreto
Infer gene regulatory networks from gene expression data using scalable algorithms (GRNBoost2, GENIE3) with support for distributed computation.
30.2k · bundle
Extracting Windows Event Logs Artifacts
Extract, parse, and analyze Windows Event Logs (EVTX) using Chainsaw, Hayabusa, and EvtxECmd to detect lateral movement, persistence, and privilege escalation.
24.6k · bundle
Polars
Process in-memory tabular data with a fast, expression-based DataFrame library that supports lazy evaluation, parallel execution, and Apache Arrow semantics.
3
Polars
Process data with high-performance DataFrames using Polars' expression-based API, lazy evaluation, and parallel execution for ETL, analytics, and pandas migration.
30.2k · bundle
Polars
Process in-memory datasets with Polars' expression API, lazy evaluation, and parallel execution, including pandas migration patterns and I/O for CSV, Parquet, and JSON.
5
Polars
High-performance DataFrame library for Python ETL, analytics, and pandas migration. Use for expression-based data manipulation with lazy query optimization, parallel execution, streaming out-of-core processing, Arrow interoperability, and optional GPU execution.
253 · bundle
Cellxgene Census
Query the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data, enabling efficient access to cell metadata, gene expression slices, summary counts, and embeddings without downloading whole datasets.
30.2k · bundle