Results for “pan-scanning”

Perform nonlinear dimensionality reduction, 2D/3D embeddings, clustering preprocessing, supervised or semi-supervised UMAP, DensMAP, AlignedUMAP, and Parametric UMAP workflows using the umap-learn library.

Process and analyze high-throughput sequencing data with deepTools for quality control, normalization, comparison, and publication-quality visualizations of ChIP-seq, RNA-seq, and ATAC-seq experiments.

Extends pandas for geospatial vector data analysis, including reading/writing shapefiles, GeoJSON, GeoPackage, and PostGIS, performing spatial joins, geometric operations, coordinate transformations, and creating static or interactive maps.

Analyze single-cell RNA-seq data with Scanpy, covering quality control, normalization, clustering, marker gene identification, visualization, and trajectory analysis.

Generates spectrograms and multi-panel audio feature visualizations from audio files via a command-line tool.