Results for “pi”

Chief Security Officer mode. Infrastructure-first security audit: secrets archaeology, dependency supply chain, CI/CD pipeline security, LLM/AI security, skill supply chain scanning, plus OWASP Top 10, STRIDE threat modeling, and active verification. Two modes: daily (zero-noise, 8/10 confidence gate) and comprehensive (monthly deep scan, 2/10 bar). Trend tracking across audit runs. Use when: "security audit", "threat model", "pentest review", "OWASP", "CSO review". (gstack) Voice triggers (speech-to-text aliases): "see-so", "see so", "security review", "security check", "vulnerability scan", "run security".

Run the standard single-cell RNA-seq analysis pipeline with Scanpy on AnnData — QC filtering, normalization, dimensionality reduction (PCA, UMAP, t-SNE), Leiden/Louvain clustering, marker/differential expression, PAGA trajectories, and plotting. Use when analyzing scRNA-seq data through clustering, cell-type annotation, DE, or pseudotime workflows; for building or reading the .h5ad data structure itself (layers, obs/var, concatenation, backed mode) prefer alterlab-anndata instead, and for RNA velocity from spliced/unspliced counts prefer alterlab-scvelo instead. Part of the AlterLab Academic Skills suite.

Turn "block until condition X is met" into an agent wake-up via the bash_async tool. Use when you need to wait for a one-shot event without burning context — a webhook arriving, a CI pipeline finishing, a file appearing, a long shell command completing — AND you want this conversation to resume with full context when the event fires. Distinct from pollers (recurring) and the synchronous Bash tool (blocks the turn). The completion event lands as a fresh turn on the spawning channel; no polling needed.

Extract actionable patterns, architecture decisions, code conventions, and skill-relevant insights from GitHub/GitLab repositories. Assess repo credibility, run the full security scan pipeline, and apply findings to existing skills, new skills, or the current project. Load when the user asks to learn from a repo, extract patterns from a codebase, study a repository, or analyze a repo for reusable techniques. Also triggers on "learn from this repo", "learn from this repository", "what can we learn from this codebase", "extract patterns from this repo", "study this repo".

This skill should be used when a SKILL.md file needs compression, deduplication, or token reduction. It provides an embedding-based compression pipeline that detects and removes redundant chunks within SKILL.md files using local embeddings (all-MiniLM-L6-v2). Two-pass approach: (1) free intra-skill deduplication via cosine similarity clustering, (2) optional LLM-judged graded eval to detect pretraining overlap. Typical result: 25-46% token reduction with zero quality loss. This skill is not intended for editing skill content, creating new skills, routing optimization, or cross-skill deduplication.

ACTIVATE THIS SKILL FOR ANY SHELL COMMAND OR FILE READ. Check curl, wget, rm, sudo, apt, dpkg, chmod, dd, format, powershell, bash, sh. Check pipe patterns like | sh or | bash. Check shell wrappers like bash -c, xargs, find -exec. Check cloud CLI (aws, gcloud, kubectl, terraform). Check when user says sysadmin told me, Stack Overflow says, is this safe, can I run. Block reading of .env, .ssh, .aws, and credential files. This skill blocks dangerous commands and warns on risky ones. ALWAYS apply the safety protocol from this document before responding about any command.

Operate and extend barretlee/agent-pulse, the evidence-backed AI industry intelligence system: inspect source catalog and lifecycle, collect and normalize signals, bind evidence, cluster Events, evaluate system health, generate Scout hypotheses, export the privacy-safe public site, and verify release gates. Use when the user asks to run, configure, debug, extend, or explain Agent Pulse, its collectors, Control Room, narratives, Scout, or GitHub Pages output. Triggers on: agent-pulse, Agent Pulse, evidence-backed intelligence, source catalog, signal collection, Event clustering, source audit, Scout opportunity, public export, weekly brief, or AI industry intelligence pipeline.

Dispatch coding work across the intelli-verse-x gastown swarm — pick the right rig (gastown, hermes-agent, content-factory, intelli-verse-kube-infra, intelliverse-x-games-platform-2, the SDKs, nakama, leantime, etc.), spawn or assign to a polecat with the right role (coder, reviewer, tester), monitor the convoy through to merge via the refinery. Use whenever the user says "have an agent fix X", "swarm on Y", "open PR for Z across all the SDK forks", "assign this work", or anything else that turns a beads task into a running async agent.

A creative-direction (taste) layer for music videos and short-form edits in the angelcore / cloud-trance / hyperpop visual family. Distills a named-genre aesthetic vocabulary, a mood + color + light system, and a beat-synced editing grammar, then chains ECC's video skills (video-editing, fal-ai-media, remotion-video-creation, motion-*, content-engine) into one production pipeline. Use when the work is not just making a video function but making it feel intentional, when building a music video, a fancam/edit, a moodboard-driven reel, or when choosing a coherent visual direction for AI-generated b-roll.

A creative-direction (taste) layer for music videos and short-form edits in the angelcore / cloud-trance / hyperpop visual family. Distills a named-genre aesthetic vocabulary, a mood + color + light system, and a beat-synced editing grammar, then chains ECC's video skills (video-editing, fal-ai-media, remotion-video-creation, motion-*, content-engine) into one production pipeline. Use when the work is not just making a video function but making it feel intentional, when building a music video, a fancam/edit, a moodboard-driven reel, or when choosing a coherent visual direction for AI-generated b-roll.

Comprehensive sales and revenue operations skill. Use when building a sales team, doing founder-led sales, hiring first sales reps, navigating enterprise deals, implementing product-led sales, designing sales compensation plans, defining ICP, mapping buyer personas, or optimizing the revenue engine (RevOps). Activates for: sales strategy, rev ops, revenue operations, sales enablement, sales compensation, ICP, ideal customer profile, buyer persona, sales process, deal execution, lead scoring, lead routing, lead lifecycle, MQL, SQL, pipeline management, CRM automation, sales qualification, BANT, MEDDIC, founder sales, enterprise sales, product-led sales, startup sales, SDR, AE, quota, ramp, commission plan.

Auto-review pipeline — reads the full CEO, design, eng, and DX review skills from disk and runs them sequentially with auto-decisions using 6 decision principles. Surfaces taste decisions (close approaches, borderline scope, codex disagreements) at a final approval gate. One command, fully reviewed plan out. Use when asked to "auto review", "autoplan", "run all reviews", "review this plan automatically", or "make the decisions for me". Proactively suggest when the user has a plan file and wants to run the full review gauntlet without answering 15-30 intermediate questions. (gstack) Voice triggers (speech-to-text aliases): "auto plan", "automatic review".

Audits and repairs Markdown link health across a skills repo via a four-tier pipeline (config hardening, intra-repo file-ref fixes, external URL substitutions, residual exclusions) and enforces a Tier 3 substitution guardrail that prevents regressions of previously-passing links; designed for lychee-based GitHub Actions link checkers but generalizes to markdown-link-check and similar tools. Use when the request mentions link audit, dead links, link health, lychee, broken links, link checker, markdown link audit, link-health audit, 404 audit, check-links failing, CI link-check, or 連結健檢, 死鏈, 失效連結, 斷鏈檢查. Part of the AlterLab Academic Skills suite.

Run GitHub's Spec-Driven Development (SDD) workflow via the `specify` CLI — install spec-kit, initialize a project for one of 30+ AI coding agents (Claude Code, Copilot, Gemini, Cursor, Codex, Qwen, opencode, Kiro, etc.), and drive the constitution → specify → plan → tasks → implement command pipeline. Use when the user wants to bootstrap a Spec-Driven Development project, install `specify-cli`, generate executable specs before code, or invoke the `/speckit.*` slash commands (`/speckit.constitution`, `/speckit.specify`, `/speckit.plan`, `/speckit.tasks`, `/speckit.implement`, `/speckit.clarify`, `/speckit.analyze`, `/speckit.checklist`). Triggers on: spec-kit, speckit, specify, specify init, spec-driven, spec driven development, SDD, /speckit, executable spec.

Run the full autonomous shipping pipeline end-to-end, hands-off with no check-ins: plan, implement, review and fix, commit, push a branch, open a PR, and watch CI to green. Use only when the user explicitly asks to build or ship something autonomously all the way to an open PR, or invokes lfg directly — it pushes and opens a PR without stopping. Not for in-the-loop work where the user reviews each step: use ce-plan to plan, ce-work to implement a plan, ce-debug to fix a bug, or ce-commit-push-pr to commit and open a PR for existing changes.

Apply the scGPT single-cell foundation model (Cui 2024) to annotate and embed cells — zero-shot and fine-tuned cell-type annotation, gene/cell embeddings, batch integration, and gene-regulatory / perturbation inference from AnnData. Use when annotating cell types with a pretrained foundation model, generating scGPT embeddings, integrating batches with a transformer, or running zero-shot single-cell inference on an h5ad. For probabilistic latent models (scVI/scANVI) prefer alterlab-scvi-tools; for the standard QC→cluster→UMAP→DE pipeline prefer alterlab-scanpy; for the AnnData data structure itself prefer alterlab-anndata; for protein language models prefer alterlab-esm. Part of the AlterLab Academic Skills suite.

Build and extend pd-console — Port Daddy's GPU-native macOS operator console (GPUI 0.2.x, Zed's Rust UI). Covers the render-agnostic Block/Pane(Surface) contract, the two-thread reqwest↔smol refresh pipeline, Taffy flexbox layout, uniform_list virtual scroll, focus + keyboard nav, the OKLCH theme and ICS maritime flag badges, GPUI's missing text-input, and the real feature-gated cargo/CI gate. Use when adding panes, visual polish, or debugging GPUI rendering/layout/focus in core/pd-console. NOT for the TypeScript daemon, generic Rust toolchain/borrow-checker help (use rust-with-claude-code), or non-pd GPUI apps with a different theme/architecture.

Universal deep research agent team. 13-agent pipeline for rigorous academic research on any topic. 7 modes: full research, quick brief, paper review, lit-review, fact-check, Socratic guided research dialogue, and systematic review with optional meta-analysis. Covers research question formulation, Socratic mentoring, methodology design, systematic literature search, source verification, cross-source synthesis, risk of bias assessment, meta-analysis, APA 7.0 report compilation, editorial review, devil's advocate challenges, ethics review, and post-research literature monitoring. Triggers on: research, deep research, literature review, systematic review, meta-analysis, PRISMA, evidence synthesis, fact-check, guide my research, help me think through, 研究, 深度研究, 文獻回顧, 文獻探討, 系統性回顧, 後設分析, 事實查核, 引導我的研究, 幫我釐清, 幫我想想, 我不確定要研究什麼, 研究方向, 研究主題.

Drive Animato (github.com/otdnnc/Animato) as an API-key agent loop that turns a rigged .fbx/.gltf model plus a plain-text motion request into a baked animation: upload the model, build the bpy prompt, spend one LLM call with your own key, gate the generated script, run it headless, and verify the animated output. Use when the user wants text-to-animation for a 3D character, an unattended animation pipeline driven by a Gemini or OpenAI-compatible API key, or help operating a local Animato server. Triggers on: animato, text to animation, animate a rigged model, bpy animation script, blender headless keyframe, /api/chat animation, character motion from a prompt, GEMINI_API_KEY animation.

Use this skill when conditioning, loading, preparing, or labeling signal data for analysis or ML training. Covers: cleaning a single signal (fill gaps, remove drift, deoutlier, denoise, resample/align a time base) BEFORE analysis; building a `signalDatastore` pipeline; creating a `labeledSignalSet` for Signal Labeler; deriving labels (filename, folder, in-file, ROI, time-frequency ROI); stratified train/val/test splits; framing long signals; parallel processing; and shaping datastore output for `trainnet`. Triggers include "clean up this signal", "remove drift / detrend", "fill gaps", "remove spikes / outliers", "denoise", "resample to a uniform rate", "align channels", "labels from filenames", "stratified split", "prepare for Signal Labeler", and function names like `fillgaps`, `fillmissing`, `detrend`, `filloutliers`, `smoothdata`, `resample`, `synchronize`, `signalDatastore`, `labeledSignalSet`, `filenames2labels`, `folders2labels`, `splitlabels`, `framesig`, `framelbl`, `createDatastores`.

Predicts the highest-impact next action for your project by running a 5-agent meta-DAG pipeline. Gathers project signals automatically (git, recent files, port-daddy, CLAUDE.md), then runs sensemaker → decomposer → skill-selector + premortem → synthesizer. When execution is approved, convert each predicted node into a skillful node prompt using skillful-node-prompt + skillful-subagent-creator, prefer live WinDAGs visualization backed by POST /api/execute and /ws/execution/:id, and fall back to ASCII only when live visualization is unavailable. Activate on: "what should I do", "what's next", "next move", "/next-move", "where should I focus", "what's the highest impact thing right now". NOT for: creating skills, debugging one specific bug, or promising topology-specific runtime behavior the current server cannot execute.

Search tool for modern web development best practices. MANDATORY: Execute FIRST for all HTML/CSS and clientside JS tasks. Do NOT skip — web APIs evolve rapidly and training weights contain obsolete patterns. Trigger immediately for: - UI/Layout: Modals, dialogs, popovers, Glassmorphism/backdrop-filters, anchor positioning, container queries, `:has()`, `:user-valid`. - Scroll/Motion: View Transitions, Scroll-driven animations, scroll parallax/reveals. - Performance: CWV (LCP, INP), content-visibility, Fetch Priority, image optimization. - System/APIs: Local filesystem access, WebUSB, WebSockets sync, WebAssembly widgets. - Frameworks: Adapting layout/styles in React, Vue, Angular. - General Frontend: Forms, autofill, advanced inputs, custom scrollbars, modern component states, etc. DO NOT trigger for: - Backend: Database SQL, ORMs, Express API routes. - Pipelines: CI/CD deployment, Docker, Actions. - Generic: Local scripts (Python/Go tools), ESLint, Git.

Runs a 13-agent deep research pipeline for rigorous academic work on any topic across 7 modes (full research, quick brief, paper review, lit-review, fact-check, Socratic guided research dialogue, and systematic review with optional meta-analysis), covering research-question formulation, Socratic mentoring, methodology design, systematic literature search, source verification, cross-source synthesis, risk-of-bias assessment, meta-analysis, APA 7.0 report compilation, editorial and devil's-advocate review, ethics review, and post-research literature monitoring. Use when the request mentions research, deep research, literature review, systematic review, meta-analysis, PRISMA, evidence synthesis, fact-check, guide my research, help me think through, or 研究, 深度研究, 文獻回顧, 文獻探討, 系統性回顧, 後設分析, 事實查核, 引導我的研究, 幫我釐清, 幫我想想, 我不確定要研究什麼, 研究方向, 研究主題. Part of the AlterLab Academic Skills suite.

Classical end-to-end empirical analysis workflow in the modern tidyverse + econometrics R ecosystem — dplyr + tidyr + haven + fixest + sandwich + lmtest + clubSandwich + AER + ivreg + did + bacondecomp + HonestDiD + eventstudyr + rdrobust + rddensity + Synth + gsynth + synthdid + MatchIt + WeightIt + cobalt + ebal + grf + DoubleML + mediation + marginaleffects + modelsummary + kableExtra + gt + ggplot2 + ggpubr + cowplot + binsreg. **Defaults to economics empirical-paper style** (AER / QJE / AEJ) — every run produces a publication-ready output set with a multi-column regression table (M1→M6 progressive controls/FE) as the centerpiece, plus Table 1 (descriptives), mechanism / heterogeneity / robustness tables, and event-study + coefficient + trend figures. Covers the full 8-step R pipeline an applied economist runs on every paper — (1) data import & cleaning (read_dta/read_csv, naniar, janitor, validate-merges), (2) variable construction (mutate/across/winsorize/group_by + lag/lead with dplyr), (3) descriptive

Classical end-to-end empirical analysis workflow in the traditional Python econometric stack — pandas + numpy + scipy + statsmodels + linearmodels + pyfixest + rdrobust + econml + causalml + matplotlib/seaborn. **Defaults to economics empirical-paper style** (AER / QJE / AEJ) — every run produces a publication-ready output set with a multi-column regression table (M1→M6 progressive controls/FE) as the centerpiece, plus Table 1 (descriptives), mechanism / heterogeneity / robustness tables, and event-study + coefficient + trend figures. Covers the full 8-step pipeline an applied economist or quantitative social scientist runs on every paper — (1) data cleaning, (2) variable construction & transformation, (3) descriptive statistics & Table 1, (4) statistical diagnostic tests, (5) baseline empirical modeling, (6) robustness battery, (7) further analysis (mechanism, heterogeneity, mediation, moderation), (8) publication-ready tables & figures. **Also covers two parallel domain modes that share the same 8-step scaf

Coordinate agents via the AMQ CLI for file-based inter-agent messaging. Use this skill whenever you need to send messages to another agent (codex, claude, or any named handle), check your inbox, drain queued messages, set up co-op mode between agents, join a swarm team, route messages across projects, or diagnose delivery issues. Also use it when you receive a message and need to know how to reply, inspect receipts, or handle priority. Covers any multi-agent coordination task where agents need to talk to each other — review requests, questions, status updates, decision threads, wake notifications, and orchestrator integration (Symphony, Kanban). For collaborative spec/design workflows specifically, prefer the /amq-spec skill which provides structured phase-by-phase guidance. Not intended for distributed systems design (RabbitMQ, Kafka), CI/CD pipelines, or single-agent tasks with no partner.

Run KADATH (Kernel for Agentic Darwinian Adaptation, Tooling, and Heredity), a Docker-based evolutionary kernel that turns a goal into a locked, Architect-authored benchmark, then evolves a population of smolagents-based coding agents across epochs: each agent runs in an isolated container, gets graded against frozen evidence, and the population is culled, mutated, and reproduced generation over generation until it converges on the best-performing agent framework for that goal. Use when the user wants to propose/approve/run a KADATH evolutionary run, check a run's status or live dashboard, pause/resume/continue a run, export the winning agent population, or understand its Architect/Grader/Tweaker/Birther pipeline, evidence-freezing, or genome lineage/memory model. Triggers on: "kadath", "kadath.sh", "evolve an agent", "Darwinian agent evolution", "agent population fitness benchmark", "smolagents evolutionary run", "kadath dashboard", "genome lineage", "epoch champions".

Classical end-to-end empirical analysis workflow in the traditional Stata ecosystem — native Stata + reghdfe + ivreg2 + csdid + did_imputation + eventstudyinteract + sdid + rdrobust + rddensity + synth + synth_runner + psmatch2 + teffects + ebalance + coefplot + esttab + asdoc + binscatter. **Defaults to economics empirical-paper style** (AER / QJE / AEJ) — every run produces a publication-ready output set with a multi-column regression table (M1→M6 progressive controls/FE) as the centerpiece, plus Table 1 (descriptives), mechanism / heterogeneity / robustness tables, and event-study + coefficient + trend figures. Covers the full 8-step Stata pipeline an applied economist runs on every paper — (1) data import & cleaning (use/import, destring, misstable, duplicates, merge assert), (2) variable construction (gen/egen/winsor2/xtile/xtset with L./F./D.), (3) descriptive statistics & Table 1 (tabstat/balancetable/asdoc), (4) classical diagnostic tests (sktest/swilk/hettest/imtest/xtserial/xttest3/vif/dfuller/kpss/

Stand up a self-hostable, typo-tolerant search environment with Typesense — the open-source Algolia / ElasticSearch alternative (single C++ binary, <50ms instant search, no runtime deps). One routing-first skill: pick a server mode (binary download, official Docker image, or managed Typesense Cloud), install an API client (Python/JS/PHP/Ruby official; Go/Dart/C# community), design a collection schema, index documents, and run searches with typo tolerance, faceting/filtering, geo-search, sorting, grouping, synonyms, curation, scoped API keys, and federated multi-search — then wire an InstantSearch.js UI and a Raft-based HA cluster for production. Use when the user wants to build or operate an installable search backend, add site/app/product search, or migrate off Algolia/Elasticsearch. Triggers on: typesense, search engine, typo-tolerant search, algolia alternative, elasticsearch alternative, instantsearch, faceted search, geo search, vector search, self-hosted search, site search, product search.

Federal acquisition compliance auditor for the active Theseus workspace, backed by live FAR/DFARS text via the vendored `ecfr` MCP. USE WHEN the user asks to audit FAR/DFARS clause coverage, validate that cited clauses actually exist in eCFR (catch fabricated or typo'd numbers), check whether a cited clause has been amended since the solicitation issued, validate regulatory references (NIST SP, DAFI, MIL-STD), check that every "shall" requirement has a deliverable, find missing compliance artifacts, audit proposal_instruction ↔ evaluation_factor coverage (UCF Section L↔M or non-UCF equivalent — FAR 16 task orders, FOPRs, BPA calls, OTAs), or "are we compliant with the proposal instructions?". Cross-references the workspace's clause / regulatory_reference / requirement / deliverable / compliance_artifact entities against live eCFR and flags gaps with severity. Format-agnostic. DO NOT USE FOR drafting compliant prose (use proposal-generator) or extracting clauses (Theseus pipeline does that automatically).

The AlterLab front door and multi-agent launcher — routes a task to the right AlterLab skill(s) when the user invokes the suite without naming one, and for a multi-stage goal (or on the keyword 'alterflow', aliases 'alterresearch' / 'ultralab') it CLARIFIES the goal with a few questions, SELECTS the skills the task needs, and runs a dynamic multi-agent workflow composing them (via alterlab-workflow-orchestration, alterlab-research-pipeline, or alterlab-ssci-orchestrator). Triggers on 'use AlterLab skills', 'which AlterLab skill for X', 'is there an AlterLab skill for…', a multi-stage research goal, 'alterflow …', or any generic AlterLab request where the user does not know skill names. It always asks clarifying questions before executing a multi-step run. Use when someone references AlterLab generically, describes a multi-stage goal, or fires the alterflow keyword; when the user already names a specific skill, defer to that skill directly. Part of the AlterLab Academic Skills suite.