Results for “ensembl”

Infer gene regulatory networks (GRNs) from expression matrices using arboreto's scalable GRNBoost2 and GENIE3 tree-ensemble algorithms with Dask-distributed computation. Use when analyzing bulk or single-cell RNA-seq transcriptomics to map transcription-factor-to-target-gene regulatory interactions, build adjacency networks, or run the GRN-inference step of a SCENIC pipeline on large datasets. Part of the AlterLab Academic Skills suite.

Uruchamianie i wdrażanie platformy Soneta (enova365, Triva) w kontenerach. Używaj gdy użytkownik: (1) stawia środowisko (server + web) na obrazach Soneta przez `docker compose` albo na Apple `container` / Container Desktop; (2) tworzy bazę danych w kontenerze (usługa init z `dbmgr create`, `--demo`, `--recreate`, licencja, konwersja); (3) wdraża na Kubernetes przez Helm (`helm repo add soneta`, `values.yaml`, `dblist`, `adminMode`); (4) wybiera wersję obrazów (tagi z Docker Hub `soneta/*` lub `registry.soneta.pl`), architekturę (alpine/arm64/amd64), logowanie do registry; (5) potrzebuje SQL Servera — zewnętrznego (`host.docker.internal` / `host.containers.internal`) albo jako kontener `mssql`; (6) rozwiązuje problemy startu stacku (kolejność, port zajęty, brak DNS między usługami w Apple container, zły host-alias). Słowa kluczowe: docker compose, docker-compose.yaml, apple container, Container Desktop, helm, kubernetes, obraz, tag, wersja, mssql, dbmgr, x-init, server.standard, web.standard.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers. Use when "inngest, serverless background job, event-driven workflow, step function, durable execution, vercel background job, scheduled function, fan out, inngest, serverless, background-jobs, event-driven, workflows, step-functions, durable-execution, vercel, nextjs" mentioned.

Build serverless background jobs and event-driven workflows with Inngest, covering functions, steps, cron schedules, webhooks, and fan-out patterns.

Narzędzia deweloperskie wiersza poleceń (CLI) platformy Soneta (enova365, Triva). Używaj gdy użytkownik: (1) zarządza bazami danych przez `dbmgr` — tworzy, rejestruje, konwertuje, backup/restore, licencje, rozszerzenia (extensions), analiza, kompilacja; (2) przygotowuje bazę testową/demo z wiersza poleceń albo automatyzuje operacje na bazach w skrypcie/CI; (3) testuje działającą aplikację przez `buscall` — zdalnie steruje programem (nawigacja, formularze, gridy, edycja) i robi zrzuty ekranu; (4) uruchamia aplikację ramki `SonetaFrame` (`SonetaFrameNew`), konfiguruje źródła baz danych (`demo:`, `http`, `docker:`, `process:`, `orchestrator:`) albo pyta o plik ustawień `Settings_Product.json`; (5) pyta o składnię, komendy lub opcje `dbmgr`, `buscall`, `callmcp`, `SonetaFrame`; (6) wspomina „zarządzanie bazą enova", „baza demo", „konwersja bazy", „testowanie na żywej aplikacji", „ramka Soneta". Sięgnij też, gdy inny skill potrzebuje operacji na bazie lub weryfikacji zmian na uruchomionej aplikacji.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers. Use when: inngest, serverless background job, event-driven workflow, step function, durable execution.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Data pipeline patterns — ETL/ELT, batch vs streaming, idempotency, orchestration. Use when designing a data pipeline, choosing between batch and streaming, implementing ingestion or transformation, setting up orchestration, or debugging pipeline failures.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers. Use when: inngest, serverless background job, event-driven workflow, step function, durable execution.

Build serverless background jobs, event-driven workflows, and durable execution with Inngest, without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers. Use when: inngest, serverless background job, event-driven wor...

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Inngest expert for serverless-first background jobs, event-driven workflows, and durable execution without managing queues or workers.

Deploy ERC20 tokens on Base, Ethereum, Arbitrum, and other EVM chains using the Clanker SDK. Use when the user wants to deploy a new token, create a memecoin, set up token vesting, configure airdrops, manage token rewards, claim LP fees, or update token metadata. Supports V4 deployment with vaults, airdrops, dev buys, custom market caps, vanity addresses, and multi-chain deployment.

Rowan is a cloud-native molecular modeling and medicinal-chemistry workflow platform with a Python API. Use for pKa and macropKa prediction, conformer and tautomer ensembles, docking and analogue docking, protein-ligand cofolding, MSA generation, molecular dynamics, permeability, descriptor workflows, and related small-molecule or protein modeling tasks. Ideal for programmatic batch screening, multi-step chemistry pipelines, and workflows that would otherwise require maintaining local HPC/GPU infrastructure.