Results for “snakemake”

Creates SageMaker endpoints (real-time or async) with autoscaling, CloudWatch alarms, and tagging enabled by default, then smoke-tests them before declaring success.

Discovers, validates, or creates a SageMaker execution role before deploying or training, preventing IAM-related deployment failures.

Analyze and manage GNU Make build systems: discover targets, inspect variables and dependencies, and debug build failures with dry runs and structured reports.

Validates inputs, generates samplesheets and launch scripts, and optionally executes nf-core/pacsomatic matched tumor-normal workflows from BAM files, supporting local runs and scheduler submission (LSF/Slurm/PBS/SGE).