Results for “task-sequence”

Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.

Coordinate multi-agent development pipelines using shared JSON task files. Use when dispatching work across dev team agents (code-agent, test-agent, docs-agent, monitor-bot), tracking pipeline progress, or running sequential/parallel workflows. Covers project init, task assignment, status tracking, agent dispatch via sessions_send, and result collection. Supports two modes: linear (sequential pipeline) and dag (dependency graph with parallel execution).

Queue processing with fresh context per phase. Processes N tasks from the queue, spawning isolated subagents to prevent context contamination. Supports serial, parallel, batch filter, and dry run modes. Triggers on "/ralph", "/ralph N", "process queue", "run pipeline tasks".

Turn "block until condition X is met" into an agent wake-up via the bash_async tool. Use when you need to wait for a one-shot event without burning context — a webhook arriving, a CI pipeline finishing, a file appearing, a long shell command completing — AND you want this conversation to resume with full context when the event fires. Distinct from pollers (recurring) and the synchronous Bash tool (blocks the turn). The completion event lands as a fresh turn on the spawning channel; no polling needed.

Run ESM protein language models — ESM3 for generative multimodal protein design across sequence, structure, and function, and ESM C for efficient embeddings and representations — locally or via the cloud Forge API. Use when working with protein sequences, structures, or function prediction, designing novel proteins, generating protein embeddings, performing inverse folding, or doing protein-engineering tasks. Part of the AlterLab Academic Skills suite.

Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.

Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.