Results for “bioconda”

6 skills

Orchestrates a complete bulk RNA-seq differential-expression study from raw FASTQ reads through QC, alignment, quantification, differential expression, pathway enrichment, and publication figures.

30.2k · bundle

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connect-cdc-mysql

Streams MySQL or MariaDB row-level changes into Redpanda or Kafka via the mysql_cdc input, covering binlog setup, snapshots, checkpointing, per-table routing, AWS RDS IAM auth, and Enterprise lakehouse destinations.

Query 40+ bioinformatics services (UniProt, KEGG, ChEMBL, Reactome) with a unified Python interface for cross-database analysis, identifier mapping, and sequence analysis.

30.2k · bundle

Build streaming data pipelines with Redpanda Connect using declarative YAML configs, Bloblang mappings, and component discovery. Covers running, linting, and dry-running pipelines.

153-dxpy-bae649e0

Provides Python bindings to interact with the DNAnexus platform, enabling file uploads, job management, and API calls.

connect-debugging

Diagnoses and validates Redpanda Connect pipelines using linting, dry-run connection tests, logging, metrics, tracing, and health endpoints, including enterprise feature troubleshooting.