GitHub project operations with quality gates

cenci workflow layer: portable engineering conventions and Claude Code's gated GitHub ticket-to-PR pipeline

Enterprise / cross-functional Research Operations domain — the managed counterpart to the academic research/ domain. v2.9.0 ships 5 skills: orchestrator (context: fork) + clinical-research (study design: protocol synopsis + endpoint selection + sample-size/power for means/proportions/survival + phase-gate feasibility) + research-finance (R&D program budgeting with F&A split + burn/runway + capital

Portable core of Sam's Claude Code setup: native pre-commit hook enforcement (sentinel gate retired 2026-08-14), on-demand /validate, generic review agents, cross-model Codex review skills, and a /bootstrap-cc-setup skill that writes the always-loaded rules layer plugins cannot ship. For repos NOT bootstrapped by the Loam Copier template - a Loam-rendered project already carries most of this in .c