Results for “data-structure”

Provide direct REST API access to UniProt (Swiss-Prot/TrEMBL) for protein sequence searches, FASTA retrieval, functional annotations (GO terms, domains), and cross-database ID mapping. Use when looking up a protein entry, fetching a protein FASTA sequence, or mapping accessions between databases over raw HTTP/REST; for EXPERIMENTAL 3D structures prefer alterlab-pdb, for AI-PREDICTED 3D structures prefer alterlab-alphafold-db, for protein-protein interaction networks prefer alterlab-string-db, and for Python workflows spanning many databases prefer bioservices instead. Part of the AlterLab Academic Skills suite.

Design GraphQL APIs with well-structured schemas, efficient resolvers, pagination, and performance patterns like DataLoader and federation. Use when the user requests graphql api design or provides relevant inputs for this workflow.

Extract structured product details from Amazon using an ASIN, including title, price, ratings, brand, and description via the BrowserAct API.

Automate OSINT collection using SpiderFoot REST API and CLI for target profiling, module-based reconnaissance, and structured result analysis across 200+ data sources.

Use when designing a new system, choosing between architectural patterns, planning how components will connect, evaluating scalability and reliability trade-offs, or reviewing an existing system for structural problems. For system design, service boundaries, database design, API structure, monolith vs microservices decisions, and architecture decision records (ADRs). Activate when user says "how should I structure this", "design the system", "is this architecture right", or "plan the backend".

Scrapes tweets from X (Twitter) by search query, user handle, or direct URL, returning structured data including text, author info, engagement metrics, media, and hashtags.

Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.

Query the EMBL-EBI InterPro REST API for protein family, domain, and functional-site annotations integrated from member databases (Pfam, PANTHER, PRINTS, SMART, SUPERFAMILY, CDD, ProSite, NCBIfam, and others). Use when predicting protein function, analyzing or comparing domain architecture, classifying a protein by family or homologous superfamily, resolving a Pfam/InterPro accession, or mapping a protein's signatures to GO terms. Not for raw UniProt entry/FASTA retrieval or AlphaFold 3D structures. Part of the AlterLab Academic Skills suite.