Results for “grnboost2”

Connects agents to the GSTD Grid for decentralized compute, hive memory, and blockchain-based economic settlement via MCP tools.

Greenfield development path for products, tools, and systems that do not yet exist. G Stack validates the idea before anything is planned or built. Use when starting from zero: no existing codebase, no existing schema, no existing API that this extends. AUTO-FIRE immediately when the user says any of: - "new development", "/new-development [description]" - "I have an idea for [X]", "I want to build [X] from scratch" - "new product", "new tool", "new platform", "new application" - "build [X] — it doesn't exist yet", "start a new project" Do NOT use when an existing codebase already exists for the work — use /full-development for large brownfield work. If unsure: ask "Does any part of this already exist in code?" If yes → /full-development. This is the most token-intensive command. Use it when the investment is justified by the scope of what is being built.

Runs NCBI BLAST+ 2.17.0 sequence searches from the command line: makeblastdb (with -parse_seqids), blastn/blastp/blastx/tblastn with tabular -outfmt 6/7 for parsing, correct -task choice (megablast vs blastn vs blastn-short), -taxids/-negative_taxids taxonomic scoping, and -mt_mode multithreading; plus a DIAMOND blastp --ultra-sensitive path for large protein searches. Warns that -max_target_seqs is a heuristic keep-count, not a top-N best-hits filter. Use when the user wants command-line BLAST, makeblastdb, a local BLAST database, blastn/blastp/blastx/tblastn searches, or DIAMOND protein search. For the Bio.Blast web NCBIWWW API prefer alterlab-biopython; for quick one-liner database lookups prefer alterlab-gget. Part of the AlterLab Academic Skills suite.