Plugins

2 plugins

@alirezarezvani

Email-workflow skill pair: inbox-setup builds your taxonomy/KB; inbox-triage classifies + drafts (drafts-only, never auto-send). KB-file contract between them. Path-B from megaprompts 06+07.

2 skills · plugin

Han Plugin Builder

Guidance for building Claude Code skills, agents, and plugins. The guidance skill answers authoring questions and, run with init, vendors the full guidance set into a repo as a path-scoped rule index so the right guidance surfaces while editing skill and agent files. Opt-in and dependency-free: installed on its own, not pulled in by the han meta-plugin.

3 skills · plugin

Results for “path”

19 skills

Alterlab Reactome

Query the Reactome REST API for pathway analysis, over-representation/enrichment, gene-to-pathway mapping, disease pathways, molecular interactions, and expression analysis. Use when running pathway enrichment on a gene list, mapping genes to curated biological pathways, or exploring disease pathways for systems biology studies. Part of the AlterLab Academic Skills suite.

Provide direct REST API access to KEGG (academic use only) for pathway analysis, gene-to-pathway and compound-to-pathway mapping, metabolic reactions, KEGG Orthology (KO), drug-drug interactions, and ID conversion. Use when querying KEGG pathways, mapping genes/compounds to metabolic maps, or running KEGG pathway enrichment via raw HTTP/REST; for protein-protein interaction networks prefer alterlab-string-db, for protein sequences and annotations prefer alterlab-uniprot, and for Python workflows spanning many databases prefer bioservices instead. Part of the AlterLab Academic Skills suite.

Trading Skills Navigator

Routes trading and investing goals to the right workflow, skillset, API profile, and setup path without executing trades.

Alterlab Clinvar

Query NCBI ClinVar via the E-utilities API or FTP for the clinical significance (pathogenicity) of human germline genetic variants, searching by gene, variant, condition, or genomic position and interpreting ACMG/AMP classifications and review-status star ratings. Use when assessing whether a variant is pathogenic, likely pathogenic, VUS, likely benign, or benign, resolving conflicting interpretations, or annotating a VCF with ClinVar clinical significance. For population allele frequencies by ancestry use alterlab-gnomad; for somatic cancer mutation frequencies use alterlab-cosmic. Part of the AlterLab Academic Skills suite.

Converts text to speech and generates MP3 audio files using Hume AI or OpenAI APIs, printing the file path for delivery.

Converts text to speech and generates MP3 audio files using Hume AI or OpenAI APIs, printing the file path for delivery.

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johnalbertini14-glitch

Converts text to speech and generates MP3 audio files using the Hume AI or OpenAI API, printing the file path for delivery.

Exp Simd Vectorization

Optimizes hot-path scalar loops in .NET 8+ with cross-platform Vector128/Vector256/Vector512 SIMD intrinsics, or replaces manual math loops with single TensorPrimitives API calls.

Colab Unzip Workflow

Colab notebook setup pattern. Trigger when: (1) Creating new Colab notebooks, (2) API key file not found, (3) file path errors in Colab, (4) repository extraction fails, (5) 'yfinance fallback' despite keys existing.

Routes API calls to third-party services through Maton-managed connections, with read-only defaults and explicit user approval for any data-modifying operations.

mariadb-corporation

Mariadb REST Service Update Endpoints

Modify existing MariaDB REST Service endpoints using ALTER and DROP REST statements, including renaming request paths, enabling/disabling, publishing, and merging JSON options.

netanel-abergel

OpenClaw API gateway proxy for authenticated SaaS calls (100+ services in references/SERVICES.md). Use ONLY when making an HTTP request to a third-party service that requires the gateway's stored credentials. NOT for direct API calls with bearer tokens already in scope, NOT for monday.com (use monday-for-agents), NOT for WhatsApp (use heleni-whatsapp). Triggers: "call the X API", "fetch from <service>", "send to Slack via gateway", "use the gateway for".

Connect to external services through Maton-managed API routes. Use this skill only after the user names the target app, account, and task. Start with read/list calls when possible and follow the app-specific reference before any change.

Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. For direct REST control, use individual database skills (uniprot-database, kegg-database).

Fallback Chains

Layer alternative channels / scrapers / data sources with explicit fall-through, where each rung covers a different failure mode. Use when interacting with the world (sending a notification, fetching from a third party, detecting a state change, authenticating) and the single canonical path could fail in known ways. Distinct from retrying — retries handle transient failures; fallback chains handle modal ones (channel down, API gone, cookie expired). Three layers tops; the terminal rung is loud.

Alterlab Bindingdb

Query BindingDB for measured protein-ligand binding affinities (Ki, Kd, IC50, EC50) via its keyless REST API or the full TSV download, searching by target (UniProt ID), compound (SMILES), or pathogen. Use when looking up experimental binding constants, profiling inhibitors of a protein target, doing lead optimization, polypharmacology analysis, or structure-activity relationship (SAR) studies; for curated bioactivity mining or drug-like compound library screening at scale prefer alterlab-chembl instead. Part of the AlterLab Academic Skills suite.

Alterlab String DB

Query the STRING API for protein-protein interactions (59M proteins, 20B interactions across 5000+ species), building interaction networks, discovering functional partners, and running GO/KEGG/Pfam enrichment on protein lists. Use when constructing a protein-protein interaction network, expanding from seed proteins to functional partners, or running PPI-based enrichment for systems biology; for curated metabolic pathway maps and reactions prefer alterlab-kegg, and for protein sequences, annotations, or accession ID mapping prefer alterlab-uniprot instead. Part of the AlterLab Academic Skills suite.

Runs NCBI BLAST+ 2.17.0 sequence searches from the command line: makeblastdb (with -parse_seqids), blastn/blastp/blastx/tblastn with tabular -outfmt 6/7 for parsing, correct -task choice (megablast vs blastn vs blastn-short), -taxids/-negative_taxids taxonomic scoping, and -mt_mode multithreading; plus a DIAMOND blastp --ultra-sensitive path for large protein searches. Warns that -max_target_seqs is a heuristic keep-count, not a top-N best-hits filter. Use when the user wants command-line BLAST, makeblastdb, a local BLAST database, blastn/blastp/blastx/tblastn searches, or DIAMOND protein search. For the Bio.Blast web NCBIWWW API prefer alterlab-biopython; for quick one-liner database lookups prefer alterlab-gget. Part of the AlterLab Academic Skills suite.

New Development

Greenfield development path for products, tools, and systems that do not yet exist. G Stack validates the idea before anything is planned or built. Use when starting from zero: no existing codebase, no existing schema, no existing API that this extends. AUTO-FIRE immediately when the user says any of: - "new development", "/new-development [description]" - "I have an idea for [X]", "I want to build [X] from scratch" - "new product", "new tool", "new platform", "new application" - "build [X] — it doesn't exist yet", "start a new project" Do NOT use when an existing codebase already exists for the work — use /full-development for large brownfield work. If unsure: ask "Does any part of this already exist in code?" If yes → /full-development. This is the most token-intensive command. Use it when the investment is justified by the scope of what is being built.