Plugins
2 plugins@brycewang-stanford
Science Skills
Twelve-skill bundle covering the Science manuscript lifecycle: workflow router, scope/significance fit, advance framing, abstract + one-sentence summary, main-text writing, display items, statistics & reproducibility, data/materials/code availability, reference style, cover letter, submission preflight, and reviewer rebuttal.
2 skills · plugin
@brycewang-stanford
PNAS Skills
Twelve-skill bundle covering the PNAS manuscript lifecycle: workflow router, scope/significance fit, submission-track selection (Direct vs Contributed), the ≤120-word Significance Statement, ≤250-word abstract, main-text writing with in-text Materials and Methods + classification, display items, statistics & reproducibility, data/code availability, numbered reference style, submission preflight, a
9 skills · plugin
Results for “reproducibility”
4 skillslamindb
Esta habilidade deve ser usada ao trabalhar com LaminDB, um framework de dados de código aberto para biologia que torna dados consultáveis, rastreáveis, reproduzíveis e FAIR. Use ao gerenciar datasets biológicos (scRNA-seq, espacial, citometria de fluxo, etc.), rastrear workflows computacionais, curar e validar dados com ontologias biológicas, construir data lakehouses, ou garantir linhagem de dados e reprodutibilidade em pesquisa biológica. Aborda gerenciamento de dados, anotação, ontologias (genes, tipos de célula, doenças, tecidos), validação de esquema, integrações com orquestradores de workflow (Nextflow, Snakemake) e plataformas MLOps (W&B, MLflow), e estratégias de deployment.
10 · bundle
database-seeding
Populate databases with realistic, reproducible test data for development, testing, and staging environments. Use when the user requests database seeding or provides relevant inputs for this workflow.
159
bulk-rnaseq
Orchestrates a complete bulk RNA-seq differential-expression study from raw FASTQ reads through QC, alignment, quantification, differential expression, pathway enrichment, and publication figures.
30.2k · bundle
autoskill
Manages personal local Agent Skill files by detecting reusable material, searching for similar skills, and creating or updating SKILL.md folders after user approval.
559 · bundle