Results for “rest-api”

Provide direct REST API access to PubMed via the NCBI E-utilities API, supporting advanced Boolean/MeSH queries, batch processing, and citation management. Use when searching biomedical literature by MeSH terms, retrieving abstracts or PMIDs in bulk, or scripting custom PubMed queries over raw HTTP/REST — for Python workflows prefer biopython (Bio.Entrez) instead, use this for direct REST work or custom API implementations. Part of the AlterLab Academic Skills suite.

Access and manage LabArchives electronic lab notebooks programmatically via REST API. Create entries, upload attachments, backup notebooks, generate reports, and integrate with Protocols.io, Jupyter, REDCap, and other scientific tools.

Search and retrieve academic papers from arXiv via their REST API, including citation data from Semantic Scholar.

Searches the internet via BrowserAct API when direct web access is restricted, extracting and structuring research data from multiple sources.

Submit protein sequences to the Adaptyv Bio Foundry for experimental characterization (binding, thermostability, expression, fluorescence) and retrieve results using the REST API or Python SDK.

Search and retrieve academic papers from arXiv using their free REST API. No API key needed. Search by keyword, author, category, or ID. Combine with web_extract or the ocr-and-documents skill to read full paper content.

Search and retrieve academic papers from arXiv using their free REST API. No API key needed. Search by keyword, author, category, or ID. Combine with web_extract or the ocr-and-documents skill to read full paper content.

Self-host an open-source research notebook with AI-powered note generation, multi-speaker podcast creation, and context-aware document chat, supporting 16+ AI providers.

Query the Ensembl genome database REST API across 250+ species for gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, and Variant Effect Predictor (VEP) annotations. Use when mapping gene IDs or coordinates, fetching genomic sequence, finding orthologs across species, or predicting variant consequences for genomic research. Part of the AlterLab Academic Skills suite.

Build work collaboratively in reviewable pieces, handing each piece back for review before starting the next, so the person stays in the lead and steers while the work happens instead of reviewing a finished result. Use when someone says to pair with them on something, asks to collaborate rather than direct, wants to review as it goes, or wants to guide the work piece by piece — on code, on a design decision, or on writing. For a test-first build it runs tdd, for restructuring it runs refactor, for an interface contract it runs design-an-api, and for plan work it runs iterative-plan-review or plan-implementation, each collaboratively; invoke any of those directly instead to run it straight through without pausing. Does not pace someone through code that already exists and builds nothing — use code-walkthrough. Does not explain, summarize, or research something instead of producing it — use code-overview or research.