Results for “variant-query”

Store, query, and export genomic variant data (VCF/BCF) using TileDB's sparse array technology for scalable population genomics workflows.

VS-Enhanced Research Question Refiner - Prevents Mode Collapse and derives differentiated research questions Enhanced VS 3-Phase process: Modal question avoidance, alternatives presentation, differentiated RQ recommendation Use when: refining research ideas, formulating research questions, clarifying scope Triggers: research question, 연구 질문, PICO, SPIDER, research idea

Answers questions using a structured wiki knowledge base, returning cited synthesis with wikilinks, counter-arguments, and knowledge gaps.

Multi-source search for agents across web, scholar, Tavily, and Perplexity Sonar endpoints. Use when you need structured retrieval, citation-backed answers, or broad research coverage from one AIsa API key.

Query the bundled research knowledge graph for methodology guidance. Routes questions through a 3-tier knowledge base — WHY (research claims), HOW (guidance docs), WHAT IT LOOKS LIKE (domain examples) — plus structured reference documents. Returns research-backed answers grounded in specific claims with practical application to the user's system. Triggers on "/ask", "/ask [question]", "why does my system...", "how should I...".

Multi-source comprehensive research using perplexity-researcher, claude-researcher, and gemini-researcher agents. Three modes - Quick (3 agents), Standard (9 agents), Extensive (24 agents with be-creative skill). USE WHEN user says 'do research', 'quick research', 'extensive research', 'find information about', 'investigate', 'analyze trends', 'current events', or any research-related request.

Queries 9 genomic databases in parallel for a given rsID, returning unified GWAS, PheWAS, eQTL, and fine-mapping reports.

Query the Ensembl genome database REST API across 250+ species for gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, and Variant Effect Predictor (VEP) annotations. Use when mapping gene IDs or coordinates, fetching genomic sequence, finding orthologs across species, or predicting variant consequences for genomic research. Part of the AlterLab Academic Skills suite.