Results for “bulk-metadata”

Performs differential expression analysis on bulk RNA-seq or pseudo-bulk count matrices with QC, PCA, and contrast testing.

Migrates data from MongoDB, PostgreSQL, MySQL, Neo4j, Kafka, and JSONL into SurrealDB with full and incremental CDC synchronization.

Provision Bigtable instances, design performant schemas, and query data using gcloud, cbt, or client libraries.

Perform fast genomic interval operations (overlap, nearest, merge, coverage, cluster, complement, subtract, count-overlaps), multi-format bioinformatics I/O, DataFusion SQL, and pileup on Polars DataFrames via the polars-bio library, serving as a scalable alternative to bioframe and bedtools.