Packs
2 packscurated
Analyze Single-Cell RNA-Seq
Analyze single-cell RNA-seq data using Scanpy, including quality control, normalization, clustering, marker gene identification, and visualization.
9 skills · pack
@brycewang-stanford
Cell Skills
Twelve-skill bundle covering the Cell manuscript lifecycle: workflow router, scope/significance fit, single-narrative framing, the Highlights + eTOC + Graphical Abstract trio, the ≤150-word Summary, main-text writing, display items, STAR Methods + Key Resources Table, data/code availability, Cell Press author–date references, submission preflight + cover letter, and reviewer rebuttal.
9 skills · pack
Results for “single-cell”
5 skills
k-dense-ai geniml
Train unsupervised machine learning models on genomic interval data from BED files, including region embeddings, single-cell ATAC-seq analysis, and consensus peak building.
30.2k · bundle
levalencia geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.
3 · bundle
More results
jackychenlu geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.
0 · bundle
metinduraktr-44 geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.
0 · bundle
chen-yu-hao geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.
5 · bundle