Results for “workflow-skill”

Run the standard single-cell RNA-seq analysis pipeline with Scanpy on AnnData — QC filtering, normalization, dimensionality reduction (PCA, UMAP, t-SNE), Leiden/Louvain clustering, marker/differential expression, PAGA trajectories, and plotting. Use when analyzing scRNA-seq data through clustering, cell-type annotation, DE, or pseudotime workflows; for building or reading the .h5ad data structure itself (layers, obs/var, concatenation, backed mode) prefer alterlab-anndata instead, and for RNA velocity from spliced/unspliced counts prefer alterlab-scvelo instead. Part of the AlterLab Academic Skills suite.

Supply-chain malware infection scanner. IoC-based local scan + safe eradication for npm/PyPI worm campaigns (Mini Shai-Hulud 1st/2nd, S1ngularity, lottie-player). Detects OS persistence (LaunchAgent/systemd), IDE-hook implants (.claude/.vscode/.github/workflows), lockfile-pinned malicious versions, and known C2/Session-Protocol exfil traces. Orchestrates credential rotation in the correct order so revocation does not trigger the `rm -rf ~/` retaliation payload. Don't use for static SAST (Sentinel), skill/MCP/`.claude/` supply-chain audit (Chain), Sigma/YARA rule authoring (Vigil), or incident coordination (Triage).

Provide direct REST API access to KEGG (academic use only) for pathway analysis, gene-to-pathway and compound-to-pathway mapping, metabolic reactions, KEGG Orthology (KO), drug-drug interactions, and ID conversion. Use when querying KEGG pathways, mapping genes/compounds to metabolic maps, or running KEGG pathway enrichment via raw HTTP/REST; for protein-protein interaction networks prefer alterlab-string-db, for protein sequences and annotations prefer alterlab-uniprot, and for Python workflows spanning many databases prefer bioservices instead. Part of the AlterLab Academic Skills suite.

Lazyweb is the design-evidence skill for AI coding agents. Use it when designing, critiquing, or changing product UI — it provides real app screenshots, competitor references, best practices, quick examples, creative cross-category ideas, paywall optimization guidance, and mobile growth + monetization A/B test context. Routes to the right Lazyweb mode (design workflow, quick search, update, flowchart, or A/B test research) using MCP tools and the Lazyweb server at https://www.lazyweb.com/mcp. Use before designing any screen when you need design evidence instead of training-data vibes.

Create, update, and manage GitHub issues using MCP tools. Use this skill when users want to create bug reports, feature requests, or task issues, update existing issues, add labels/assignees/milestones, set issue fields (dates, priority, custom fields), set issue types, manage issue workflows, link issues, add dependencies, or track blocked-by/blocking relationships. Triggers on requests like "create an issue", "file a bug", "request a feature", "update issue X", "set the priority", "set the start date", "link issues", "add dependency", "blocked by", "blocking", or any GitHub issue management task.

Provide direct REST API access to UniProt (Swiss-Prot/TrEMBL) for protein sequence searches, FASTA retrieval, functional annotations (GO terms, domains), and cross-database ID mapping. Use when looking up a protein entry, fetching a protein FASTA sequence, or mapping accessions between databases over raw HTTP/REST; for EXPERIMENTAL 3D structures prefer alterlab-pdb, for AI-PREDICTED 3D structures prefer alterlab-alphafold-db, for protein-protein interaction networks prefer alterlab-string-db, and for Python workflows spanning many databases prefer bioservices instead. Part of the AlterLab Academic Skills suite.

Run full computational-pathology workflows with PathML — whole-slide-image (WSI) analysis across 160+ slide formats, multiplexed immunofluorescence (CODEX, Vectra, MERFISH), nucleus segmentation/classification (HoVer-Net, HACTNet), tissue- and cell-graph construction, HDF5 dataset management, and deep-learning model training on pathology data. Use when the user builds end-to-end deep-learning pathology pipelines, analyzes multiplexed or spatial-proteomics slides, or segments nuclei. For lightweight H&E slide preprocessing, tissue masking, or plain Random/Grid/Score tile extraction prefer alterlab-histolab instead. Part of the AlterLab Academic Skills suite.

This skill should be used when the user asks to "swap tokens", "trade ETH for USDC", "exchange tokens on Uniswap", "buy tokens", "sell tokens", "convert ETH to stablecoins", "find memecoins", "discover tokens", "research tokens", "tokens to buy", "find tokens to swap", "what should I buy", or mentions swapping, trading, researching, discovering, buying, or exchanging tokens on any Uniswap-supported chain. Supports both known token swaps and token discovery workflows (discovery uses keyword search and web search — there is no live "trending" feed). Generates deep links to execute swaps in the Uniswap interface.

Create, set up, or update the personal context portfolio: structured markdown files describing who you are, how you work, your teams, and your tool/ADO configuration. Runs the interview workflow for first-time setup and targeted edits for updates. Trigger this skill when the user asks to: set up their context, create or update their context portfolio, "create my IQ", "set up my IQ", edit their profile, add/remove a stakeholder, update ADO config, change team info, update pillars, or set up any plugin configuration. Trigger when another skill fails to find context (missing files or TODO markers) and needs context populated. Also trigger when the user mentions a context change in passing (e.g., "my manager changed", "we added someone to the team") to offer a context file update. Do NOT trigger for read-only questions like "who's on my team?" or "what's my ADO config?". Those are answered directly from the context files referenced in the loaded custom instructions; no skill is needed.

Default entry point for any research request — a hybrid router that classifies the question deterministically and either delegates to a specialist research skill (pulse for trends/sentiment, grants for NIH funding, litreview for academic literature, syllabus for course reading, patent for prior-art + IP landscape, dossier for entity research) or runs its own plan-decompose-multi-source-search-synthesize-cite fallback workflow when no specialist matches. Always surfaces the routing decision so users can override. Triggers — "research [topic]", "look into [topic]", "what do we know about [topic]", "investigate [topic]", "find me information on [topic]", "do some research on [topic]", "I need to understand [topic]", or any research request that doesn't obviously match a more-specific specialist skill. Output is a markdown briefing (default) or .docx document (on request) with full citations and an audit log.

Composite skill — configure a fresh or under-configured repo for the release-branch workflow in one pass. Creates the `release` branch on origin, seeds `CHANGELOG.md` (Keep-a-Changelog format), drops in `.claude/dep-sweep-config.json` + `.claude/branch-hygiene-config.json` + a `release-cadence.md` standard stub, opens a `chore/repo-bootstrap` PR to main. Use instead of manually setting these up before the first `/pr-to-release` — without this, none of the release-branch composites can fire. Idempotent: skips any artifact that already exists. Replaces ad-hoc "set up the new repo" scripts.

Requires python3, and AISA_API_KEY. Uses the supplied AISA_API_KEY to send requests to https://api.aisa.one. Native-first ClawHub plugin for `trend-forecast`. Ships the packaged AIsa skill with an `openclaw.plugin.json` manifest and a Claude-compatible bundle fallback. Multi-signal trend forecasting for autonomous agents. Combines prediction market odds, Twitter/X social sentiment, news velocity, and stock market data into a unified trend analysis with confidence scoring. Powered by AIsa — one API key, five data streams. Use when: the user needs X/Twitter research, monitoring, posting, or engagement workflows.

Coordinate agents via the AMQ CLI for file-based inter-agent messaging. Use this skill whenever you need to send messages to another agent (codex, claude, or any named handle), check your inbox, drain queued messages, set up co-op mode between agents, join a swarm team, route messages across projects, or diagnose delivery issues. Also use it when you receive a message and need to know how to reply, inspect receipts, or handle priority. Covers any multi-agent coordination task where agents need to talk to each other — review requests, questions, status updates, decision threads, wake notifications, and orchestrator integration (Symphony, Kanban). For collaborative spec/design workflows specifically, prefer the /amq-spec skill which provides structured phase-by-phase guidance. Not intended for distributed systems design (RabbitMQ, Kafka), CI/CD pipelines, or single-agent tasks with no partner.

Cascade PCB components, add lumped elements, export Touchstone, and bridge to eye diagram or antenna array workflows. TRIGGER: user asks to cascade or connect multiple RF PCB components, add lumped R/L/C, export S-parameters to Touchstone, or combine PCB elements into a circuit. Invoke BEFORE writing pcbcascade or circuit code — cascade rules and port matching are non-obvious. SKIP: designing individual components (use the specific matlab-design-pcb-* skill), EM analysis of a single component (use matlab-analyze-em), material/stackup setup only (use matlab-manage-pcb-material), optimization (use matlab-optimize-pcb-design).

Expert voxel artist with deep knowledge of MagicaVoxel workflows, palette design, animation techniques, mesh conversion, and game engine optimization. This skill represents insights from professional voxel artists, Teardown developers, and the MagicaVoxel community - knowledge Claude wouldn't normally have about this specialized art form. Use when "voxel, voxel art, magicavoxel, qubicle, voxel model, voxel animation, voxel game, blocky art, minecraft style, teardown style, voxel character, voxel environment, voxel optimization, voxel export, voxel to mesh, marching cubes, greedy meshing, voxel palette, destructible voxels, voxel, 3d, pixel-art, game-dev, magicavoxel, qubicle, animation, optimization, indie-games, retro, blocky" mentioned.

Generate and edit images on RunComfy via the `runcomfy` CLI — a smart router across the full image-model catalog: FLUX 2 (Klein 9B/4B, Pro, Dev, Flash, Turbo, Max), Google Nano Banana 2 / Pro, OpenAI GPT Image 2, ByteDance Seedream 5 / 4-5 / 4-0 and Dreamina 4-0, Alibaba Qwen Image and Z-Image Turbo, Wan 2-7. Covers both text-to-image (t2i) and image-to-image / edit (i2i) endpoints — the skill picks the right model for the user's actual intent (typography precision, photoreal portraits, sub-second iteration, multi-reference brand styling, open-weights workflow) and ships each model's documented prompting patterns plus the minimal `runcomfy run` invoke. Triggers on "generate image", "make a picture", "text to image", "AI image", "make an image of …", "image to image", "i2i", or any explicit ask to create or restyle an image.

Video outpainting on RunComfy via the `runcomfy` CLI — extend the spatial canvas of a video, change aspect ratio (9:16 vertical to 16:9 horizontal or vice versa), add environment beyond the original frame while preserving the central action. Routes prompt-shaped spatial extension through Wan 2-7 edit-video and points the agent at dedicated ComfyUI outpaint workflows when seam quality matters for hero delivery. Triggers on "video outpaint", "video outpainting", "extend video canvas", "expand video frame", "uncrop video", "aspect ratio change", "vertical to horizontal video", "16:9 from 9:16", "TikTok to YouTube", or any explicit ask to extend a video spatially beyond its original frame.

Expert 3D modeling specialist with deep knowledge of topology, UV mapping, game-ready and film-ready pipelines, DCC tool workflows (Blender, Maya, ZBrush, 3ds Max, Houdini), retopology, LOD systems, and export pipelines. This skill represents years of production experience distilled into actionable guidance. Use when "3d model, 3d modeling, mesh topology, uv unwrap, uv mapping, retopology, retopo, low poly, high poly, subdivision, subdiv, edge flow, edge loops, polygon modeling, box modeling, hard surface, organic modeling, sculpting, zbrush, blender modeling, maya modeling, 3ds max, LOD, level of detail, game ready mesh, film ready, baking normals, high to low, fbx export, gltf export, texel density, 3d, modeling, topology, uv, game-dev, vfx, blender, maya, zbrush, retopology, lod, hard-surface, organic, sculpting" mentioned.

Expert GDPR compliance assistant covering all four core workflows: (1) auditing code and systems for GDPR violations, (2) drafting GDPR-compliant documents such as privacy policies, Data Processing Agreements (DPAs), and consent notices, (3) answering GDPR compliance questions with authoritative article citations, and (4) reviewing data flows and PII handling practices. Use this skill whenever the user mentions GDPR, data protection, privacy compliance, lawful basis, data subject rights, DPA, privacy notices, consent management, data breaches, DPIAs, controller/ processor relationships, cross-border data transfers, or any EU/UK data privacy topic. Also trigger for questions like "is this GDPR compliant?", "how do I handle personal data?", "what does a privacy policy need?", or any request involving PII, personal data, or data retention in a regulatory context.

Use this skill whenever the user wants to integrate Loops from application code, backend services, webhook handlers, or server-side automation. This includes the Loops HTTP API and official SDKs for server-side contact, contact-property, mailing-list, event, API-key-validation, transactional-email, content editing (campaigns, campaign groups, transactional groups, audience segments, email messages, themes, and components), and workflow inspection. Trigger on phrases like "Loops API", "Loops SDK", "create a campaign via API", "update email message LMX", "send a Loops event from my app", "add a contact to Loops in a webhook", "send a transactional email from backend code", or any time the user wants to integrate Loops into their app, backend, webhook, or automation. Do not trigger for CLI or shell-only requests.

Complete SEO + GEO (Generative Engine Optimization) system for SaaS companies wanting to rank on both Google and AI search engines (ChatGPT, Perplexity, Gemini, Claude). Use this skill whenever the user asks about SEO strategy, keyword research, content planning, writing SEO-optimized articles, auditing their search performance, creating a content calendar, analyzing competitors, or optimizing for AI search visibility. Trigger on: "seo", "keyword research", "content calendar", "rank on google", "search traffic", "write an article", "blog post", "serp", "backlinks", "competitor analysis", "content cluster", "seo audit", "geo optimization", "ai search", "search console", "organic traffic", "content strategy", "publish article", "seo setup", "ranking", "impressions", "ctr", "meta description", "schema markup", "faq schema". Also trigger when a user wants to set up their SaaS blog SEO from scratch, analyze their current rankings, or create a publishing workflow.

Classical end-to-end empirical analysis workflow in the modern tidyverse + econometrics R ecosystem — dplyr + tidyr + haven + fixest + sandwich + lmtest + clubSandwich + AER + ivreg + did + bacondecomp + HonestDiD + eventstudyr + rdrobust + rddensity + Synth + gsynth + synthdid + MatchIt + WeightIt + cobalt + ebal + grf + DoubleML + mediation + marginaleffects + modelsummary + kableExtra + gt + ggplot2 + ggpubr + cowplot + binsreg. **Defaults to economics empirical-paper style** (AER / QJE / AEJ) — every run produces a publication-ready output set with a multi-column regression table (M1→M6 progressive controls/FE) as the centerpiece, plus Table 1 (descriptives), mechanism / heterogeneity / robustness tables, and event-study + coefficient + trend figures. Covers the full 8-step R pipeline an applied economist runs on every paper — (1) data import & cleaning (read_dta/read_csv, naniar, janitor, validate-merges), (2) variable construction (mutate/across/winsorize/group_by + lag/lead with dplyr), (3) descriptive

Classical end-to-end empirical analysis workflow in the traditional Python econometric stack — pandas + numpy + scipy + statsmodels + linearmodels + pyfixest + rdrobust + econml + causalml + matplotlib/seaborn. **Defaults to economics empirical-paper style** (AER / QJE / AEJ) — every run produces a publication-ready output set with a multi-column regression table (M1→M6 progressive controls/FE) as the centerpiece, plus Table 1 (descriptives), mechanism / heterogeneity / robustness tables, and event-study + coefficient + trend figures. Covers the full 8-step pipeline an applied economist or quantitative social scientist runs on every paper — (1) data cleaning, (2) variable construction & transformation, (3) descriptive statistics & Table 1, (4) statistical diagnostic tests, (5) baseline empirical modeling, (6) robustness battery, (7) further analysis (mechanism, heterogeneity, mediation, moderation), (8) publication-ready tables & figures. **Also covers two parallel domain modes that share the same 8-step scaf

Classical end-to-end empirical analysis workflow in the traditional Stata ecosystem — native Stata + reghdfe + ivreg2 + csdid + did_imputation + eventstudyinteract + sdid + rdrobust + rddensity + synth + synth_runner + psmatch2 + teffects + ebalance + coefplot + esttab + asdoc + binscatter. **Defaults to economics empirical-paper style** (AER / QJE / AEJ) — every run produces a publication-ready output set with a multi-column regression table (M1→M6 progressive controls/FE) as the centerpiece, plus Table 1 (descriptives), mechanism / heterogeneity / robustness tables, and event-study + coefficient + trend figures. Covers the full 8-step Stata pipeline an applied economist runs on every paper — (1) data import & cleaning (use/import, destring, misstable, duplicates, merge assert), (2) variable construction (gen/egen/winsor2/xtile/xtset with L./F./D.), (3) descriptive statistics & Table 1 (tabstat/balancetable/asdoc), (4) classical diagnostic tests (sktest/swilk/hettest/imtest/xtserial/xttest3/vif/dfuller/kpss/

Generate and edit images on RunComfy via the `runcomfy` CLI — a smart router across the full image-model catalog: FLUX 2 (Klein 9B/4B, Pro, Dev, Flash, Turbo, Max), Google Nano Banana 2 / Pro, OpenAI GPT Image 2, ByteDance Seedream 5 / 4-5 / 4-0 and Dreamina 4-0, Alibaba Qwen Image and Z-Image Turbo, Wan 2-7. Covers both text-to-image (t2i) and image-to-image / edit (i2i) endpoints — the skill picks the right model for the user's actual intent (typography precision, photoreal portraits, sub-second iteration, multi-reference brand styling, open-weights workflow) and ships each model's documented prompting patterns plus the minimal `runcomfy run` invoke. Triggers on "generate image", "make a picture", "text to image", "AI image", "make an image of …", "image to image", "i2i", or any explicit ask to create or restyle an image.

Generate and edit images on RunComfy via the `runcomfy` CLI — a smart router across the full image-model catalog: FLUX 2 (Klein 9B/4B, Pro, Dev, Flash, Turbo, Max), Google Nano Banana 2 / Pro, OpenAI GPT Image 2, ByteDance Seedream 5 / 4-5 / 4-0 and Dreamina 4-0, Alibaba Qwen Image and Z-Image Turbo, Wan 2-7. Covers both text-to-image (t2i) and image-to-image / edit (i2i) endpoints — the skill picks the right model for the user's actual intent (typography precision, photoreal portraits, sub-second iteration, multi-reference brand styling, open-weights workflow) and ships each model's documented prompting patterns plus the minimal `runcomfy run` invoke. Triggers on "generate image", "make a picture", "text to image", "AI image", "make an image of …", "image to image", "i2i", or any explicit ask to create or restyle an image.

Single entrypoint for taw-kit. User types `/taw <anything in VN or EN>` — this skill classifies the intent (BUILD / FIX / SHIP / MAINTAIN / ADVISOR) and loads the matching branch file to execute. Replaces the old one-command-per-task model (/taw-new, /taw-add, /taw-fix, /taw-deploy, /taw-security) with a single unified command. Supports dev workflows out of the box: test, upgrade, clean, perf, rollback, refactor, types, seed, review, stack-swap, status, and ADVISOR group (analyze, suggest, coverage, adversarial, scope-check) for opinionated review of existing code. User-visible strings match the user's input language (Vietnamese by default for VN users). Two modes: SAFE (default — clarify + approval, max 1 round-trip) and YOLO (skip gates, smart defaults — for demos/power users). YOLO triggers: prose contains `yolo`, `nhanh nha`, `lam luon`, `khoi hoi`, `auto`, or args start with `yolo`. Trigger phrases (EN + VN) — broad match so user can keep typing plain prose without re-invoking /taw every turn. Grouped by