Results for “gnn”

Graph-based drug discovery toolkit. Molecular property prediction (ADMET), protein modeling, knowledge graph reasoning, molecular generation, retrosynthesis, GNNs (GIN, GAT, SchNet), 40+ datasets, for PyTorch-based ML on molecules, proteins, and biomedical graphs.

Finetunes the NV-Generate-CTMR MR-brain diffusion UNet from user-supplied NIfTI training volumes using a wrapper that stages configs and delegates to upstream scripts.

Build and train graph neural networks with PyTorch Geometric, covering node/link/graph classification, message passing layers, heterogeneous graphs, and custom datasets.

RNN+Transformer hybrid with O(n) inference. Linear time, infinite context, no KV cache. Train like GPT (parallel), infer like RNN (sequential). Linux Foundation AI project. Production at Windows, Office, NeMo. RWKV-7 (March 2025). Models up to 14B parameters.

Comprehensive guide to mpnn. Master the concepts, implementation, best practices, and real-world applications of mpnn in professional environments.

Implement the NIST Privacy Framework GOVERN function covering GV.AT awareness and training, GV.MT monitoring and review, GV.PO policy development, and GV.RR roles and responsibilities. Provides governance structure templates, training programs, and accountability frameworks for privacy governance.

GPG (GNU Privacy Guard) encryption and signing reference. Covers key generation (Ed25519/RSA), export/import, keyservers, file encryption (symmetric + asymmetric), git commit signing, detached signatures, gpg-agent caching, SSH via GPG, and pass password manager.

RNN+Transformer hybrid with O(n) inference. Linear time, infinite context, no KV cache. Train like GPT (parallel), infer like RNN (sequential). Linux Foundation AI project. Production at Windows, Office, NeMo. RWKV-7 (March 2025). Models up to 14B parameters.

Checks for GSD updates via npm, shows the changelog between installed and latest versions, and performs a clean reinstall after user confirmation.

NIH grant research skill for clinical researchers. Grill-me intake (research idea + career stage + preliminary data + environment + submission posture + known institute targets) locks down the funding strategy before any search runs. Runs a 5-face...

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.

Plans, executes, and validates Google Kubernetes Engine (GKE) cluster upgrades and maintenance operations for both Standard and Autopilot clusters, producing upgrade plans, checklists, and runbooks with gcloud commands.

Plans, configures, and manages GKE networking including private clusters, VPC-native configurations, Gateway API, DNS, ingress/egress, Dataplane V2, and IP planning.

Build the proof-of-concept automation that backs a freelance bid — turns a drafted gig's solution shape into a real, validated n8n workflow via the n8n Cloud MCP (SDK flow), publishes it, and writes the live workflow URL back onto the gig's Notion row. The Prove phase of the Inbound Gig Engine.

GPG (GNU Privacy Guard) encryption and signing reference. Covers key generation (Ed25519/RSA), export/import, keyservers, file encryption (symmetric + asymmetric), git commit signing, detached signatures, gpg-agent caching, SSH via GPG, and pass password manager.

Deploy a production self-hosted n8n instance on a fresh Linux VM over SSH, using Docker Compose behind a Caddy reverse proxy with automatic HTTPS.

Query gnomAD (Genome Aggregation Database) for population allele frequencies and gene constraint scores (pLI, LOEUF) reflecting loss-of-function intolerance. Use when checking how common a variant is across populations, filtering rare-disease candidate variants, assessing variant pathogenicity, or identifying loss-of-function intolerant genes. Part of the AlterLab Academic Skills suite.

Prüft KG- und Personengesellschaften-Fälle in Großkanzlei Corporate/M&A-Mandaten: Frist, Form, Zuständigkeit, Rechtsweg und Sofortmaßnahmen; liefert eine Fristen- und Risikoampel mit Sofortschritten.

Manage notes, bookmarks, and notebooks using the nb CLI. Create, list, search, and organize notes across multiple notebooks with Git-backed versioning.

Analyze and engineer protein glycosylation by scanning sequences for N-glycosylation sequons, predicting O-glycosylation hotspots, and accessing curated glycoengineering tools for therapeutic antibody optimization and vaccine design.

Watches a Gmail mailbox for new emails and streams them as NDJSON, with options for Pub/Sub setup, filtering by labels, and output to files.

Internal network assessment. VLAN hopping, ARP spoofing detection, broadcast protocol abuse (LLMNR/NBT-NS/mDNS), network segmentation verification, SNMP enumeration, NFS exposure, router/switch audit, and internal service mapping. Assumes attacker has network access. Uses nmap, arp-scan, nbtscan, snmpwalk, onesixtyone, smbmap, nfs-common, masscan, hping3, and netexec.

Quantize large language models to 4-bit with minimal accuracy loss using GPTQ, enabling deployment of 70B+ models on consumer GPUs with 4× memory reduction and 3-4× faster inference.

NIH grant research skill for clinical researchers. Grill-me intake (research idea + career stage + preliminary data + environment + submission posture + known institute targets) locks down the funding strategy before any search runs. Runs a 5-facet Consensus positioning analysis (with draft Significance/Innovation language), maps the research to the right NIH institutes and study sections via RePORTER, finds NOSIs and funded overlap, and produces an editable Word document (.docx) with budget/scope-aware mechanism recommendations, submission timelines, and a mandatory program officer recommendation. Use when the user asks about research funding or makes any grant-related request (e.g., 'grants for [topic]', 'find grants for my research idea', 'what grants match my research', 'help me find NIH funding', 'grant opportunities for my research'). NIH-only scope — non-NIH funders (PCORI, DOD CDMRP, VA, foundations) are out of scope and flagged at intake.

Use when publishing or releasing a new version of an npm/pnpm/yarn/bun package to the registry. Covers package-manager detection, semver bump selection, tagging, pushing, scoped-package access, authentication, and one-time passwords (OTP).

Generate images with Google Nano Banana 2 (Gemini-family flash-tier text-to-image) on RunComfy — bundled with the model's documented prompting patterns so the skill gets sharper output than naive prompting against the same model. Documents Nano Banana 2's strengths (rapid iteration, in-image typography rendering, predictable framing, optional web-grounded context), the resolution-tier pricing, the safety-tolerance dial, and when to route to Nano Banana Pro / GPT Image 2 / Flux 2 / Seedream instead. Calls `runcomfy run google/nano-banana-2/text-to-image` through the local RunComfy CLI. Triggers on "nano banana", "nano-banana-2", "nano banana 2", "google image gen", "gemini image", or any explicit ask to generate with this model.

Generate images with Google Nano Banana 2 (Gemini-family flash-tier text-to-image) on RunComfy — bundled with the model's documented prompting patterns so the skill gets sharper output than naive prompting against the same model. Documents Nano Banana 2's strengths (rapid iteration, in-image typography rendering, predictable framing, optional web-grounded context), the resolution-tier pricing, the safety-tolerance dial, and when to route to Nano Banana Pro / GPT Image 2 / Flux 2 / Seedream instead. Calls `runcomfy run google/nano-banana-2/text-to-image` through the local RunComfy CLI. Triggers on "nano banana", "nano-banana-2", "nano banana 2", "google image gen", "gemini image", or any explicit ask to generate with this model.

Provides quick reference documentation for Dnscheck concepts, best practices, and implementation patterns, covering intro, quickstart, debugging, performance, security, migration, and cheatsheet topics.

Infer gene regulatory networks (GRNs) from expression matrices using arboreto's scalable GRNBoost2 and GENIE3 tree-ensemble algorithms with Dask-distributed computation. Use when analyzing bulk or single-cell RNA-seq transcriptomics to map transcription-factor-to-target-gene regulatory interactions, build adjacency networks, or run the GRN-inference step of a SCENIC pipeline on large datasets. Part of the AlterLab Academic Skills suite.

Predicts gene and transcript structure from a DNA sequence using the hosted Genomic Intelligence API, producing a report and JSON output.

Build reusable, composable n8n sub-workflows with typed inputs, stateless or stateful design, and discoverable naming conventions.

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.

Annotates single-cell RNA-seq data by scoring marker genes, transferring labels with CellTypist, or reasoning over marker lists with an LLM.