Results for “knowledge-graph-reasoning”
54 skillstorchdrug
Graph-based drug discovery toolkit. Molecular property prediction (ADMET), protein modeling, knowledge graph reasoning, molecular generation, retrosynthesis, GNNs (GIN, GAT, SchNet), 40+ datasets, for PyTorch-based ML on molecules, proteins, and biomedical graphs.
5 · bundle
torchdrug
Build and train graph neural networks for drug discovery, protein modeling, and molecular science using PyTorch-native tools.
30.2k · bundle
lambda
Universal transformation λ(ο,K).τ with recursive self-improvement. USE WHEN routing reasoning, validating knowledge graphs, preparing CICM/ANZCA examinations, or when self-improvement of reasoning/architecture/context is required. Routes queries through R0-R3 complexity pipelines, validates topology (η≥target) and governance (KROG), emits per style (Φ), and compounds learnings into knowledge K. Triggers on complexity assessment, multi-step reasoning, examination mode, or /λ invocation.
0 · bundle
More results
knowledge-graph-creation
Build structured knowledge graphs from unstructured text by extracting entities, mapping relationships, generating graph triples, and visualizing the result. Use when the user requests knowledge graph creation or provides relevant inputs for this workflow.
159
graph
Interactive knowledge graph analysis. Routes natural language questions to graph scripts, interprets results in domain vocabulary, and suggests concrete actions. Triggers on "/graph", "/graph health", "/graph triangles", "find synthesis opportunities", "graph analysis".
3 · bundle
knowledge-graph
Knowledge graph and smart memory management using graphify + Obsidian-inspired patterns. Use when: setting up a knowledge graph, managing memory health, cross-linking notes, compiling wiki pages from scattered notes, adding structured frontmatter, or running memory health checks. Triggers on: 'knowledge graph', 'graphify', 'wiki', 'cross-link', 'memory health', 'frontmatter', 'compile notes', 'wikilinks'.
6 · bundle
graph-rag
Knowledge-graph-augmented retrieval. Entity and triple extraction, graph construction (Neo4j, LlamaIndex PropertyGraphIndex), hierarchical community summarization (Microsoft GraphRAG), personalized PageRank (HippoRAG), multi-hop traversal retrieval, and hybrid graph + vector pipelines. USE WHEN: user mentions "GraphRAG", "HippoRAG", "knowledge graph RAG", "entity extraction", "multi-hop reasoning", "Neo4j RAG", "LlamaIndex property graph", "LangChain graph retriever", "triple extraction", "community summarization" DO NOT USE FOR: vanilla vector RAG - use `rag-patterns`; multimodal inputs - use `multimodal-rag`; production indexing ops - use `rag-production`; hallucination checks - use `rag-guardrails`
28
knowledge-craft
Knowledge Craft
18 · bundle
mini-context-graph
Build a persistent, compounding knowledge base that combines a wiki, knowledge graph, and raw source storage for structured retrieval with provenance.
36.2k · bundle
knowledge-graph
Build, update, and query a persistent project knowledge graph from skills, memory, docs, and code structure — stdlib Python only, no external tools. Dual-mode: skill-library (agent-loom) or application (any consumer repo). Load when the user asks for a knowledge graph, project map, skill relationships, query the graph, update the graph, or trace how components connect. Auto-runs on memory-handoff and project-setup bootstrap. Also triggers on "build the graph", "what connects to X", "map this project".
3 · bundle
ask
Query the bundled research knowledge graph for methodology guidance. Routes questions through a 3-tier knowledge base — WHY (research claims), HOW (guidance docs), WHAT IT LOOKS LIKE (domain examples) — plus structured reference documents. Returns research-backed answers grounded in specific claims with practical application to the user's system. Triggers on "/ask", "/ask [question]", "why does my system...", "how should I...".
3 · bundle
ontology
Typed knowledge graph for structured agent memory and composable skills. Use when creating/querying entities (Person, Project, Task, Event, Document), linking related objects, enforcing constraints, planning multi-step actions as graph transformations, or when skills need to share state. Trigger on "remember", "what do I know about", "link X to Y", "show dependencies", entity CRUD, or cross-skill data access.
2 · bundle
understand
Analyze a codebase to produce an interactive knowledge graph for understanding architecture, components, and relationships
0 · bundle
graphify-windows
any input (code, docs, papers, images) → knowledge graph → clustered communities → HTML + JSON + audit report. Use when user asks any question about a codebase, project content, architecture, or file relationships — especially if graphify-out/ exists. Provides persistent graph with god nodes, community detection, and BFS/DFS query tools.
1 · bundle
mega
Maximally Endowed Graph Architecture — λ-calculus over bounded n-SuperHyperGraphs with grounded uncertainty, conditional self-duality, and autopoietic refinement. Use when (1) simple graphs insufficient (η<2), (2) multi-scale reasoning required, (3) uncertainty is structured not stochastic, (4) knowledge must self-refactor. Pareto-governed: complexity added only when simpler structures fail validation.
0 · bundle
llm-wiki
Karpathy's LLM Wiki: build/query interlinked markdown KB.
0
network-map
Reads existing per-leader research files to map co-authorships, endorsements, and organizational ties across movement leaders, producing a cross-leader network graph with clusters, bridges, and isolates.
1
social-graph-ranker
Ranks mutual connections by bridge value for warm introductions, using a weighted graph model with decay and engagement bonuses.
226k
drivelm-driving-with-graph-visual-question-answering-arxiv-2
DriveLM: Driving with Graph Visual Question Answering
6
allen-cacm1983
Temporal interval algebra for reasoning about time relationships in planning and knowledge representation
10 · bundle
llm-wiki
Karpathy's LLM Wiki: build/query interlinked markdown KB.
1
llm-wiki
Karpathy's LLM Wiki: build/query interlinked markdown KB.
0
graph
Use when extracting entities and relationships, building ontologies, compressing large graphs, or analyzing knowledge structures - provides structural equivalence-based compression achieving 57-95% size reduction, k-bisimulation summarization, categorical quotient constructions, and metagraph hierarchical modeling with scale-invariant properties. Supports recursive refinement through graph topology metrics including |R|/|E| ratios and automorphism analysis.
0 · bundle
graphify-windows
Builds a navigable knowledge graph from any folder of files, with community detection, an audit trail, and outputs including interactive HTML, GraphRAG-ready JSON, and a plain-language report.
3 · bundle
graphify-windows
Turns any folder of files into a navigable knowledge graph with community detection, producing interactive HTML, GraphRAG-ready JSON, and a plain-language report.
5 · bundle
llm-wiki
Karpathy's LLM Wiki: build/query interlinked markdown KB.
1
knowledge-agent
Build and query AI-powered knowledge bases from claude-mem observations, enabling focused conversational sessions on specific topics.
knowledge-loop
Composite skill — query, capture, improve, and persist knowledge in one workflow. Chains recall (RAG query) → sync-memories (write durable note) → rag-curate (improve weak retrievals) → handoff (durable snapshot if session-ending). Use when the work involves "what did we decide", "remember this", "save where we are", or any closing checkpoint.
1 · bundle
llm-wiki
Karpathy's LLM Wiki: build/query interlinked markdown KB.
65
llm-wiki
Build and maintain a persistent, interlinked markdown knowledge base that compiles knowledge once and keeps it current, with cross-references and contradiction flags.
2
conscious-goal-framing
当需要将个人知识或经验转化为商业机会,或希望建立有意义的个人发展路径时
11 · bundle
codebase-memory
Codebase Memory — Knowledge Graph Tools
0
graphify
Use for any question about a codebase, its architecture, file relationships, or project content — especially when graphify-out/ exists, where the question should be treated as a graphify query first. Turns any input (code, docs, papers, images, videos) into a persistent knowledge graph with god nodes, community detection, and query/path/explain tools.
65 · bundle
llm-wiki
Karpathy's LLM Wiki — build and maintain a persistent, interlinked markdown knowledge base. Ingest sources, query compiled knowledge, and lint for consistency.
3
kud-knowledge-type-mapper
Classify curriculum content into Know, Understand, and Do categories to align teaching and assessment approaches. Use when planning units, writing objectives, or selecting assessment methods.
0
context-manager
Elite AI context engineering specialist mastering dynamic context management, vector databases, knowledge graphs, and intelligent memory systems.
16