Results for “snp”
55 skillsSnp2tbl
Use when converting NCBI dbSNP docsum XML into flat tabular rows through the bundled `snp2hgvs | hgvs2spdi | spdi2tbl` pipeline.
0 · bundle
Snp
Analyzes sample phenotype and SNP genotype data to identify the best-performing homozygous genotype at each locus, excluding heterozygous and missing calls, and writes results to a CSV file.
559
Nutrigx
Generates a personalised nutrition report from consumer genetic data (23andMe, AncestryDNA, VCF) by interrogating nutritionally-relevant SNPs and producing actionable dietary guidance, all computed locally.
17 · bundle
More results
Dna
Translates raw genomic data into personalized health, longevity, and pharmacogenomic protocols for AI agents.
2
Sns
Create and manage SNS topics, subscriptions, and message publishing for pub/sub messaging patterns.
1.1k · bundle
Alterlab Gwas
Query the NHGRI-EBI GWAS Catalog REST API for SNP-trait associations, retrieving variants by rs ID, disease/trait, or gene along with p-values and summary statistics. Use when investigating genome-wide association study hits, mapping a SNP or rsID to traits, building polygenic risk scores, or doing genetic epidemiology lookups. Part of the AlterLab Academic Skills suite.
60 · bundle
Npsp Data Model
Understand and query the NPSP data model, including namespace prefixes, GAU allocations, recurring donations, relationships, and affiliations.
15 · bundle
Snyk API
Snyk API skill. Use when working with Snyk for user, group, orgs. Covers 100 endpoints.
6 · bundle
Csp
Content Security Policy configuration, nonces, and reporting.
3 · bundle
Sns Expert
Use when implementing sns functionality with production-grade patterns and safeguards.
3
Analyzing Network Packets With Scapy
Craft, send, sniff, and dissect network packets using Scapy for protocol analysis, network reconnaissance, and traffic anomaly detection in authorized security testing.
24.6k · bundle
Scanpy
Single-cell RNA-seq analysis. Load .h5ad/10X data, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for scRNA-seq analysis.
5 · bundle
Scanpy
Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and visualization. Best for exploratory scRNA-seq analysis with established workflows. For deep learning models use scvi-tools; for data format questions use anndata.
3 · bundle
Csp
Content Security Policy configuration, nonces, and reporting.
1.7k · bundle
Pnpm
Manage Node.js dependencies with pnpm, including workspaces, catalogs, patches, and supply-chain security.
5.5k · bundle
Detecting Dnp3 Protocol Anomalies
Detect anomalies in DNP3 protocol communications used in SCADA systems by monitoring for unauthorized control commands, firmware update attempts, protocol violations, and deviations from baseline traffic patterns using deep packet inspection and machine learning approaches.
24.6k · bundle
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identific...
1
Npsp Custom Rollups
Configures, troubleshoots, and extends NPSP Customizable Rollups, including rollup definitions, filter groups, batch job modes, and migration from legacy rollups.
15 · bundle
Pnpm
Node.js package manager with strict dependency resolution. Use when running pnpm specific commands, configuring workspaces, or managing dependencies with catalogs, patches, or overrides.
8 · bundle
Swppp
Drafts a Stormwater Pollution Prevention Plan (SWPPP) compliant with 40 CFR Part 122, EPA Construction General Permit (CGP), and applicable state NPDES requirements for construction projects disturbing one or more acres. Use when drafting SWPPPs, construction stormwater permits, erosion control plans, NPDES compliance documents, or BMP selection memoranda.
34
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.
2
Alterlab Scanpy
Run the standard single-cell RNA-seq analysis pipeline with Scanpy on AnnData — QC filtering, normalization, dimensionality reduction (PCA, UMAP, t-SNE), Leiden/Louvain clustering, marker/differential expression, PAGA trajectories, and plotting. Use when analyzing scRNA-seq data through clustering, cell-type annotation, DE, or pseudotime workflows; for building or reading the .h5ad data structure itself (layers, obs/var, concatenation, backed mode) prefer alterlab-anndata instead, and for RNA velocity from spliced/unspliced counts prefer alterlab-scvelo instead. Part of the AlterLab Academic Skills suite.
60 · bundle
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.
7
Detecting Lateral Movement With Splunk
Detect adversary lateral movement across networks using Splunk SPL queries against Windows authentication logs, SMB traffic, and remote service abuse.
24.6k · bundle
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.
1
Snakemake Skip Existing
Per-channel skip-existing checks in Snakemake wrapper scripts for resuming interrupted SLURM jobs. Trigger: Snakemake interrupted job, skip existing channels, resume incomplete cycle, sentinel missing but outputs exist, per-channel completeness check, wrapper script resume logic.
3
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionali
6
Performing Dns Tunneling Detection
Detects DNS tunneling by computing Shannon entropy of DNS query names, analyzing query length distributions, inspecting TXT record payloads, and identifying high subdomain cardinality using scapy for packet capture analysis.
24.6k · bundle
Nlb
Checks library loans and searches the National Library Board of Singapore catalogue with filters for availability, material type, collection, and location.
1 · bundle
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.
63
Cnb Npc Search
搜索 NPC 角色。
0
Scanpy
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.
11
Scanpy
Analyze single-cell RNA-seq data with Scanpy, covering quality control, normalization, clustering, marker gene identification, visualization, and trajectory analysis.
3
Scanpy
Analyze single-cell RNA-seq data with Scanpy, covering quality control, normalization, clustering, marker gene identification, visualization, and trajectory analysis.
5
Stp
根据STP(市场细分、目标市场定位、市场定位)框架撰写结构化学术论文,涵盖引言、概述、细分、定位、挑战和结论等章节,并遵循指定的字数和内容要求。
559
Network 101
This skill should be used when the user asks to "set up a web server", "configure HTTP or HTTPS", "perform SNMP enumeration", "configure SMB shares", "test network services", or needs guidance on configuring and testing network services for penetration testing labs.
505 · bundle