Run bioinformatics analysis workflows with bioSkills

Use bioSkills to give an agent domain-specific bioinformatics procedures, tool choices, and guardrails for omics analysis workflows.

agentskillexchange Updated 28 repo stars

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Run bioinformatics analysis workflows with bioSkills

Use bioSkills to give an agent domain-specific bioinformatics procedures, tool choices, and guardrails for omics analysis workflows.

Prerequisites

A SKILL.md-compatible coding agent plus the relevant local scientific tooling for the selected workflow, such as R, Python, command-line bioinformatics tools, workflow engines, and analysis data

Installation

Install or set up from the source-backed instructions:

Clone https://github.com/GPTomics/bioSkills into the skills location used by the target agent, then invoke the relevant SKILL.md file for the bioinformatics workflow being performed. Install workflow-specific scientific packages only as required by the selected skill.

Documentation

Source

agentskillexchange/skills/tree/main/skills/run-bioinformatics-analysis-workflows-with-bioskills commit 82a0621b09

Frequently asked questions

npx skillmds@latest add agentskillexchange/run-bioinformatics-analysis-workflows-with-bioskills