1---2name: chematagent-drug-discovery3description: <!--4---5<!--6# COPYRIGHT NOTICE7# This file is part of the "Universal Biomedical Skills" project.8# Copyright (c) 2026 MD BABU MIA, PhD <md.babu.mia@mssm.edu>9# All Rights Reserved.10#11# This code is proprietary and confidential.12# Unauthorized copying of this file, via any medium is strictly prohibited.13#14# Provenance: Authenticated by MD BABU MIA1516-->1718---19name: chematagent-drug-discovery20description: Chemical Lab Agent21keywords:22 - chemistry23 - drug-discovery24 - tools25 - synthesis26 - property-prediction27measurable_outcome: Plan a synthesis route and predict ADMET properties for a candidate molecule with >80% validity.28license: MIT29metadata:30 author: CheMatAgent Team31 version: "1.0.0"32compatibility:33 - system: Python 3.9+34allowed-tools:35 - run_shell_command36 - read_file37---3839# CheMatAgent4041A two-tiered agent system with access to 137 Python-wrapped chemical tools for drug discovery and materials science.4243## When to Use4445* **Molecule Design**: Generating novel structures with specific properties.46* **Property Prediction**: Estimating solubility, toxicity, and bioactivity.47* **Synthesis Planning**: Designing retro-synthetic routes.4849## Core Capabilities50511. **Tool Orchestration**: Manages a library of 137 chemical tools.522. **Multi-Scale Modeling**: Bridges quantum mechanics and molecular dynamics.533. **Lab Automation**: Generates instructions for robotic synthesis platforms.5455## Workflow56571. **Goal**: Define target property (e.g., "LogP < 5").582. **Design**: Generate candidates.593. **Filter**: Use property prediction tools.604. **Plan**: Output synthesis recipe.6162## Example Usage6364**User**: "Design a molecule similar to Aspirin but with higher solubility."6566**Agent Action**:67```bash68python -m chematagent.design --scaffold "Aspirin" --objective "maximize solubility"69```707172<!-- AUTHOR_SIGNATURE: 9a7f3c2e-MD-BABU-MIA-2026-MSSM-SECURE -->
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BioTender-max (@biotender-max) published this skill. Their other Agent Skills are listed on their SkillMD profile.