Source: https://github.com/aipoch/medical-research-skills
When to Use
- Pre-submission screening: Run a final compliance check on a manuscript before journal/conference submission.
- Academic writing quality control: Ensure citations, references, and abbreviations follow consistent standards across a draft.
- Institutional compliance review: Identify potential academic integrity risks (e.g., high similarity passages) for internal audits.
- Collaborative editing: Validate consistency when multiple authors contribute sections with different citation/abbreviation habits.
- Revision triage: Generate a prioritized issue list with locations to guide efficient corrections.
Key Features
- Citation verification
- Checks citation formatting and completeness.
- Validates consistency between in-text citations and the reference list.
- Abbreviation standardization
- Ensures abbreviations are defined at first occurrence.
- Detects inconsistent abbreviation usage across the document.
- Similarity and repetition detection
- Flags high-similarity passages and repetitive expressions.
- Suggests paraphrasing and/or adding citations where appropriate.
- Actionable reporting
- Produces an issue list with locations, priorities, and revision suggestions.
- Supports structured outputs using provided templates.
Dependencies
- None (documentation-driven skill).
- Optional reference materials:
references/guide.md (output formats, checklists, key inspection points)
assets/academic_compliance_checklist.md (reusable structured checklist template)
Example Usage
Input
Manuscript (excerpt)
In recent years, large language models (LLM) have been widely used in education.
LLM can improve feedback quality. LLM can improve feedback quality.
As shown in [1], the method outperforms baselines. According to Smith et al., 2020, the results are significant.
References
[1] Smith, J. 2020. A Study on Models. Journal of AI.
[2] Doe, A. 2019. Another Paper. Journal of ML.
Run (Checklist-Driven Review)
Use assets/academic_compliance_checklist.md as the preferred structured output format when needed, and follow references/guide.md for inspection points.
Output (Sample Findings)
# Academic Norm Review Report
## Summary
- Total issues: 6
- High priority: 2
- Medium priority: 3
- Low priority: 1
## Issues
1) [High] Abbreviation not defined at first use
- Location: Paragraph 1, sentence 1
- Evidence: "large language models (LLM)" (LLM is defined, but ensure the long form is correct and consistent)
- Suggestion: Confirm the first occurrence includes the full term + abbreviation, and keep the same form throughout.
2) [High] Repetitive expression / potential high similarity
- Location: Paragraph 1, sentences 2-3
- Evidence: "LLM can improve feedback quality." repeated verbatim
- Suggestion: Remove duplication or paraphrase; add citation if the claim is sourced.
3) [Medium] In-text citation format inconsistent
- Location: Paragraph 2, sentence 2
- Evidence: "According to Smith et al., 2020" vs. "[1]" style elsewhere
- Suggestion: Use a single citation style consistently (e.g., numeric [1] or author-year).
4) [Medium] Reference list and in-text citation mismatch risk
- Location: Paragraph 2
- Evidence: Author-year citation "Smith et al., 2020" should map clearly to a reference entry
- Suggestion: Ensure the reference list supports the chosen in-text style and that all in-text citations resolve to exactly one reference entry.
5) [Medium] Citation completeness check
- Location: References section
- Evidence: Potential missing fields (e.g., volume/issue/pages/DOI) depending on target style
- Suggestion: Complete bibliographic fields per the required style guide.
6) [Low] Abbreviation consistency check
- Location: Entire document
- Evidence: "LLM" appears; verify no variants like "L.L.M." or "LLMs" without definition rules
- Suggestion: Standardize pluralization and punctuation per style guide.
Implementation Details
1) Citation Verification
- Goal: Ensure citations are correctly formatted, complete, and consistent.
- Checks
- In-text citation style consistency (e.g., numeric vs. author-year).
- One-to-one resolvability: each in-text citation maps to a reference entry; each reference entry is cited (if required).
- Completeness of reference fields based on the target style (journal/conference/institutional rules).
- Outputs
- Missing references, uncited references, inconsistent formats, incomplete bibliographic fields.
2) Abbreviation Standards
- Goal: Ensure abbreviations are introduced and used consistently.
- Checks
- First occurrence definition:
Full Term (ABBR) or style-required variant.
- Consistency: same abbreviation for the same term; avoid multiple abbreviations for one concept.
- Variant detection: punctuation, plural forms, capitalization differences.
- Outputs
- Undefined abbreviations, inconsistent usage, conflicting definitions.
3) Similarity Rate and Paraphrasing
- Goal: Identify passages that may indicate excessive similarity or repetitive phrasing.
- Checks
- Repeated sentences/phrases within the document.
- High-overlap segments (when similarity metrics are available in your environment).
- Recommendations
- Paraphrase repetitive content while preserving meaning.
- Add citations when statements rely on external sources.
- Prefer removing redundancy when repetition adds no value.
- Outputs
- Flagged segments with locations, severity, and suggested remediation.
4) Output and Rectification
- Goal: Provide a prioritized, location-aware issue list for efficient revision.
- Report structure
- Summary counts by severity.
- Issue list with: location, evidence, rationale, and suggested fix.
- Templates
- Use
assets/academic_compliance_checklist.md for structured reporting.
- Follow
references/guide.md for recommended output formats and inspection points.
When Not to Use
- Do not use this skill when the required source data, identifiers, files, or credentials are missing.
- Do not use this skill when the user asks for fabricated results, unsupported claims, or out-of-scope conclusions.
- Do not use this skill when a simpler direct answer is more appropriate than the documented workflow.
Required Inputs
- A clearly specified task goal aligned with the documented scope.
- All required files, identifiers, parameters, or environment variables before execution.
- Any domain constraints, formatting requirements, and expected output destination if applicable.
Recommended Workflow
- Validate the request against the skill boundary and confirm all required inputs are present.
- Select the documented execution path and prefer the simplest supported command or procedure.
- Produce the expected output using the documented file format, schema, or narrative structure.
- Run a final validation pass for completeness, consistency, and safety before returning the result.
Deterministic Output Rules
- Use the same section order for every supported request of this skill.
- Keep output field names stable and do not rename documented keys across examples.
- If a value is unavailable, emit an explicit placeholder instead of omitting the field.
Output Contract
- Return a structured deliverable that is directly usable without reformatting.
- If a file is produced, prefer a deterministic output name such as
academic_norm_review_result.md unless the skill documentation defines a better convention.
- Include a short validation summary describing what was checked, what assumptions were made, and any remaining limitations.
Validation and Safety Rules
- Validate required inputs before execution and stop early when mandatory fields or files are missing.
- Do not fabricate measurements, references, findings, or conclusions that are not supported by the provided source material.
- Emit a clear warning when credentials, privacy constraints, safety boundaries, or unsupported requests affect the result.
- Keep the output safe, reproducible, and within the documented scope at all times.
Failure Handling
- If validation fails, explain the exact missing field, file, or parameter and show the minimum fix required.
- If an external dependency or script fails, surface the command path, likely cause, and the next recovery step.
- If partial output is returned, label it clearly and identify which checks could not be completed.
Completion Checklist
- Confirm all required inputs were present and valid.
- Confirm the supported execution path completed without unresolved errors.
- Confirm the final deliverable matches the documented format exactly.
- Confirm assumptions, limitations, and warnings are surfaced explicitly.
Input Validation
This skill accepts requests that match the documented purpose of academic-norm-review and include enough context to complete the workflow safely.
Do not continue the workflow when the request is out of scope, missing a critical input, or would require unsupported assumptions. Instead respond:
academic-norm-review only handles its documented workflow. Please provide the missing required inputs or switch to a more suitable skill.
Quick Validation
Run this minimal verification path before full execution when possible:
No local script validation step is required for this skill.
Expected output format:
Result file: academic_norm_review_result.md
Validation summary: PASS/FAIL with brief notes
Assumptions: explicit list if any
Scope Reminder
- Core purpose: Detects content similarity, verifies standardized citations and abbreviations, and flags potential academic integrity risks; use it before submission, during academic writing QA, or for compliance reviews.
1---2name: academic-norm-review3description: Detects content similarity, verifies standardized citations and abbreviations, and flags potential academic integrity risks; use it before submission, during academic writing QA, or for compliance reviews.4license: MIT5---6> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
7
8## When to Use
9
10- **Pre-submission screening**: Run a final compliance check on a manuscript before journal/conference submission.
11- **Academic writing quality control**: Ensure citations, references, and abbreviations follow consistent standards across a draft.
12- **Institutional compliance review**: Identify potential academic integrity risks (e.g., high similarity passages) for internal audits.
13- **Collaborative editing**: Validate consistency when multiple authors contribute sections with different citation/abbreviation habits.
14- **Revision triage**: Generate a prioritized issue list with locations to guide efficient corrections.
15
16## Key Features
17
18- **Citation verification**
19 - Checks citation formatting and completeness.
20 - Validates consistency between in-text citations and the reference list.
21- **Abbreviation standardization**
22 - Ensures abbreviations are defined at first occurrence.
23 - Detects inconsistent abbreviation usage across the document.
24- **Similarity and repetition detection**
25 - Flags high-similarity passages and repetitive expressions.
26 - Suggests paraphrasing and/or adding citations where appropriate.
27- **Actionable reporting**
28 - Produces an issue list with locations, priorities, and revision suggestions.
29 - Supports structured outputs using provided templates.
30
31## Dependencies
32
33- None (documentation-driven skill).
34- Optional reference materials:
35 - `references/guide.md` (output formats, checklists, key inspection points)
36 - `assets/academic_compliance_checklist.md` (reusable structured checklist template)
37
38## Example Usage
39
40### Input
41
42**Manuscript (excerpt)**
43
44```text
45In recent years, large language models (LLM) have been widely used in education.
46LLM can improve feedback quality. LLM can improve feedback quality.
47
48As shown in [1], the method outperforms baselines. According to Smith et al., 2020, the results are significant.
49
50References
51[1] Smith, J. 2020. A Study on Models. Journal of AI.
52[2] Doe, A. 2019. Another Paper. Journal of ML.
53```
54
55### Run (Checklist-Driven Review)
56
57Use `assets/academic_compliance_checklist.md` as the preferred structured output format when needed, and follow `references/guide.md` for inspection points.
58
59### Output (Sample Findings)
60
61```markdown
62# Academic Norm Review Report
63
64## Summary
65- Total issues: 6
66- High priority: 2
67- Medium priority: 3
68- Low priority: 1
69
70## Issues
71
721) [High] Abbreviation not defined at first use
73- Location: Paragraph 1, sentence 1
74- Evidence: "large language models (LLM)" (LLM is defined, but ensure the long form is correct and consistent)
75- Suggestion: Confirm the first occurrence includes the full term + abbreviation, and keep the same form throughout.
76
772) [High] Repetitive expression / potential high similarity
78- Location: Paragraph 1, sentences 2-3
79- Evidence: "LLM can improve feedback quality." repeated verbatim
80- Suggestion: Remove duplication or paraphrase; add citation if the claim is sourced.
81
823) [Medium] In-text citation format inconsistent
83- Location: Paragraph 2, sentence 2
84- Evidence: "According to Smith et al., 2020" vs. "[1]" style elsewhere
85- Suggestion: Use a single citation style consistently (e.g., numeric [1] or author-year).
86
874) [Medium] Reference list and in-text citation mismatch risk
88- Location: Paragraph 2
89- Evidence: Author-year citation "Smith et al., 2020" should map clearly to a reference entry
90- Suggestion: Ensure the reference list supports the chosen in-text style and that all in-text citations resolve to exactly one reference entry.
91
925) [Medium] Citation completeness check
93- Location: References section
94- Evidence: Potential missing fields (e.g., volume/issue/pages/DOI) depending on target style
95- Suggestion: Complete bibliographic fields per the required style guide.
96
976) [Low] Abbreviation consistency check
98- Location: Entire document
99- Evidence: "LLM" appears; verify no variants like "L.L.M." or "LLMs" without definition rules
100- Suggestion: Standardize pluralization and punctuation per style guide.
101```
102
103## Implementation Details
104
105### 1) Citation Verification
106
107- **Goal**: Ensure citations are correctly formatted, complete, and consistent.
108- **Checks**
109 - In-text citation style consistency (e.g., numeric vs. author-year).
110 - One-to-one resolvability: each in-text citation maps to a reference entry; each reference entry is cited (if required).
111 - Completeness of reference fields based on the target style (journal/conference/institutional rules).
112- **Outputs**
113 - Missing references, uncited references, inconsistent formats, incomplete bibliographic fields.
114
115### 2) Abbreviation Standards
116
117- **Goal**: Ensure abbreviations are introduced and used consistently.
118- **Checks**
119 - First occurrence definition: `Full Term (ABBR)` or style-required variant.
120 - Consistency: same abbreviation for the same term; avoid multiple abbreviations for one concept.
121 - Variant detection: punctuation, plural forms, capitalization differences.
122- **Outputs**
123 - Undefined abbreviations, inconsistent usage, conflicting definitions.
124
125### 3) Similarity Rate and Paraphrasing
126
127- **Goal**: Identify passages that may indicate excessive similarity or repetitive phrasing.
128- **Checks**
129 - Repeated sentences/phrases within the document.
130 - High-overlap segments (when similarity metrics are available in your environment).
131- **Recommendations**
132 - Paraphrase repetitive content while preserving meaning.
133 - Add citations when statements rely on external sources.
134 - Prefer removing redundancy when repetition adds no value.
135- **Outputs**
136 - Flagged segments with locations, severity, and suggested remediation.
137
138### 4) Output and Rectification
139
140- **Goal**: Provide a prioritized, location-aware issue list for efficient revision.
141- **Report structure**
142 - Summary counts by severity.
143 - Issue list with: location, evidence, rationale, and suggested fix.
144- **Templates**
145 - Use `assets/academic_compliance_checklist.md` for structured reporting.
146 - Follow `references/guide.md` for recommended output formats and inspection points.
147
148## When Not to Use
149
150- Do not use this skill when the required source data, identifiers, files, or credentials are missing.
151- Do not use this skill when the user asks for fabricated results, unsupported claims, or out-of-scope conclusions.
152- Do not use this skill when a simpler direct answer is more appropriate than the documented workflow.
153
154## Required Inputs
155
156- A clearly specified task goal aligned with the documented scope.
157- All required files, identifiers, parameters, or environment variables before execution.
158- Any domain constraints, formatting requirements, and expected output destination if applicable.
159
160## Recommended Workflow
161
1621. Validate the request against the skill boundary and confirm all required inputs are present.
1632. Select the documented execution path and prefer the simplest supported command or procedure.
1643. Produce the expected output using the documented file format, schema, or narrative structure.
1654. Run a final validation pass for completeness, consistency, and safety before returning the result.
166
167## Deterministic Output Rules
168
169- Use the same section order for every supported request of this skill.
170- Keep output field names stable and do not rename documented keys across examples.
171- If a value is unavailable, emit an explicit placeholder instead of omitting the field.
172
173## Output Contract
174
175- Return a structured deliverable that is directly usable without reformatting.
176- If a file is produced, prefer a deterministic output name such as `academic_norm_review_result.md` unless the skill documentation defines a better convention.
177- Include a short validation summary describing what was checked, what assumptions were made, and any remaining limitations.
178
179## Validation and Safety Rules
180
181- Validate required inputs before execution and stop early when mandatory fields or files are missing.
182- Do not fabricate measurements, references, findings, or conclusions that are not supported by the provided source material.
183- Emit a clear warning when credentials, privacy constraints, safety boundaries, or unsupported requests affect the result.
184- Keep the output safe, reproducible, and within the documented scope at all times.
185
186## Failure Handling
187
188- If validation fails, explain the exact missing field, file, or parameter and show the minimum fix required.
189- If an external dependency or script fails, surface the command path, likely cause, and the next recovery step.
190- If partial output is returned, label it clearly and identify which checks could not be completed.
191
192## Completion Checklist
193
194- Confirm all required inputs were present and valid.
195- Confirm the supported execution path completed without unresolved errors.
196- Confirm the final deliverable matches the documented format exactly.
197- Confirm assumptions, limitations, and warnings are surfaced explicitly.
198
199
200## Input Validation
201
202This skill accepts requests that match the documented purpose of `academic-norm-review` and include enough context to complete the workflow safely.
203
204Do not continue the workflow when the request is out of scope, missing a critical input, or would require unsupported assumptions. Instead respond:
205
206> `academic-norm-review` only handles its documented workflow. Please provide the missing required inputs or switch to a more suitable skill.
207
208## Quick Validation
209
210Run this minimal verification path before full execution when possible:
211
212```text
213No local script validation step is required for this skill.
214```
215
216Expected output format:
217
218```text
219Result file: academic_norm_review_result.md
220Validation summary: PASS/FAIL with brief notes
221Assumptions: explicit list if any
222```
223
224## Scope Reminder
225
226- Core purpose: Detects content similarity, verifies standardized citations and abbreviations, and flags potential academic integrity risks; use it before submission, during academic writing QA, or for compliance reviews.