gabrielmoreira TarKG Query Skill
Query the canonical packaged TarKG TSV output.
Data
- Path:
resources_metadata/dti/TarKG/tarkg.tsv - Columns:
drug,target,relation,disease,pathway
API
| Function | Input | Returns |
|---|---|---|
load_tarkg(path) |
TSV path | list[dict] |
query_entity(entity, rows, limit) |
single entity string | dict |
query_entities(entities, path, limit) |
list of entity strings | list[dict] |
query_entity returns keys used by retrieve.py: matched, node_info,
outgoing_edges, incoming_edges, candidates.
Usage
Run example.py directly for demo queries against the canonical TSV.