Paper Writing for Geoscience Research
When to Use This Skill
Invoke when:
- Drafting manuscript sections
- Formatting citations and bibliography
- Preparing figures and tables
- Adapting to journal-specific styles
- Organizing supplementary materials
IMRAD Structure
Standard structure for geoscience papers:
Introduction
- Hook: Why should anyone care? (1-2 paragraphs)
- Context: What's known? What's the gap?
- Objective: What question are we answering?
- Approach: Brief methodology preview
- Findings preview: "Here we show that..."
Methods
- Study sites: Location, geology, relevance
- Data collection: What, when, how
- Analytical methods: Lab procedures, quality control
- Statistical analysis: Tests used, software
- Reproducibility: Data availability statement
Results
- Present findings WITHOUT interpretation
- Lead with most important result
- One main finding per paragraph
- Reference all figures/tables
- Use past tense
Discussion
- Interpretation: What do results mean?
- Comparison: How do they fit prior work?
- Implications: Why does this matter?
- Limitations: What could be wrong?
- Future work: What's next?
Conclusions
- 3-5 key takeaways
- No new information
- Broader significance
Journal-Specific Styles
Nature Geoscience
- Length: 3,000 words main text
- Abstract: 150 words, no refs
- Methods: Separate section (online)
- Refs: Numbered, Nature style
- Style: High impact, accessible to broad audience
EPSL (Earth and Planetary Science Letters)
- Length: 6,000-8,000 words
- Abstract: 300 words, structured OK
- Keywords: 5-6 required
- Refs: Author-year (Harvard style)
- Style: Technical, detailed methods OK
GSA Bulletin
- Length: 8,000-12,000 words
- Abstract: 250 words
- Refs: Author-year, GSA style
- Supplementary: Encouraged for data
- Style: Regional focus, detailed stratigraphy
Citation Formatting
Author-Year (Harvard/GSA)
In-text: (Smith and Jones, 2020) or Smith and Jones (2020)
Multiple: (Smith, 2018; Jones, 2019; Chen et al., 2020)
Three+ authors: (Chen et al., 2020)
Reference list:
Smith, J.A., and Jones, B.C., 2020, Title of paper: Journal Name, v. 50, p. 100-120, doi:10.1234/example.
Numbered (Nature)
In-text: Previous work¹⁻³ showed...
Reference list:
1. Smith, J.A. & Jones, B.C. Title of paper. J. Name 50, 100-120 (2020).
Database Citations
SISAL v3:
Comas-Bru, L., et al. (2020). SISALv2: A comprehensive speleothem isotope database with multiple age-depth models. Earth System Science Data, 12, 2579-2606.
USGS Earthquake Catalog:
U.S. Geological Survey (2023). Earthquake Hazards Program. https://earthquake.usgs.gov
DISS:
DISS Working Group (2021). Database of Individual Seismogenic Sources (DISS), Version 3.3.1: A compilation of potential sources for earthquakes larger than M 5.5 in Italy and surrounding areas. https://diss.ingv.it
DOI Resolution
To get citation metadata from DOI:
- Use CrossRef API:
https://api.crossref.org/works/{DOI}
- Extract: authors, title, journal, year, volume, pages
- Format according to target journal style
Example:
DOI: 10.1038/ngeo2681
→ Toohey, M. & Sigl, M. Volcanic stratospheric sulfur injections and aerosol optical depth from 500 BCE to 1900 CE. Earth Syst. Sci. Data 9, 809-831 (2017).
Figure Standards
General Guidelines
- Resolution: 300+ DPI for publication
- Width: Single column (8.5 cm) or double (17.5 cm)
- Font: Sans-serif (Arial, Helvetica), 8-10 pt
- Colors: Colorblind-friendly palette
- Labels: A, B, C for panels (bold, upper left)
Required Figures for Paleoseismic Paper
- Location map: Study site with tectonic context
- Stratigraphic column: Sample positions, ages
- Time series: Main proxy data with anomalies marked
- Discrimination plot: Seismic vs climatic signals
- Correlation figure: Cross-validation evidence
Figure Captions
- First sentence: What the figure SHOWS
- Subsequent: Methods, abbreviations, interpretation hints
- No conclusions in captions
Table Standards
- Horizontal lines only (no vertical)
- Units in header, not cells
- Footnotes for exceptions (a, b, c)
- Round to appropriate precision
Supplementary Materials
What to Include
- Extended methods (lab protocols, code)
- Additional figures (supporting evidence)
- Data tables (raw measurements)
- Sensitivity analyses
What to Keep in Main Text
- Key results
- Essential methods
- Most compelling figures
Writing Tips
Clarity
- One idea per sentence
- Active voice preferred
- Define acronyms on first use
- Avoid jargon when possible
Hedging Language
- "We suggest that..." (uncertainty)
- "Our data are consistent with..." (not proof)
- "One interpretation is..." (alternatives exist)
Transitions
- "Building on this..."
- "In contrast to X..."
- "These findings suggest..."
- "Taken together..."
Checklist Before Submission
1---2name: paper-writing3description: Scientific manuscript preparation for geoscience journals. Includes IMRAD structure, journal styles (Nature, EPSL, GSA), citation formatting, figure standards, and supplementary materials.4---5
6# Paper Writing for Geoscience Research
7
8## When to Use This Skill
9
10Invoke when:
11- Drafting manuscript sections
12- Formatting citations and bibliography
13- Preparing figures and tables
14- Adapting to journal-specific styles
15- Organizing supplementary materials
16
17## IMRAD Structure
18
19Standard structure for geoscience papers:
20
21### Introduction
22- **Hook**: Why should anyone care? (1-2 paragraphs)
23- **Context**: What's known? What's the gap?
24- **Objective**: What question are we answering?
25- **Approach**: Brief methodology preview
26- **Findings preview**: "Here we show that..."
27
28### Methods
29- **Study sites**: Location, geology, relevance
30- **Data collection**: What, when, how
31- **Analytical methods**: Lab procedures, quality control
32- **Statistical analysis**: Tests used, software
33- **Reproducibility**: Data availability statement
34
35### Results
36- Present findings WITHOUT interpretation
37- Lead with most important result
38- One main finding per paragraph
39- Reference all figures/tables
40- Use past tense
41
42### Discussion
43- **Interpretation**: What do results mean?
44- **Comparison**: How do they fit prior work?
45- **Implications**: Why does this matter?
46- **Limitations**: What could be wrong?
47- **Future work**: What's next?
48
49### Conclusions
50- 3-5 key takeaways
51- No new information
52- Broader significance
53
54## Journal-Specific Styles
55
56### Nature Geoscience
57- **Length**: 3,000 words main text
58- **Abstract**: 150 words, no refs
59- **Methods**: Separate section (online)
60- **Refs**: Numbered, Nature style
61- **Style**: High impact, accessible to broad audience
62
63### EPSL (Earth and Planetary Science Letters)
64- **Length**: 6,000-8,000 words
65- **Abstract**: 300 words, structured OK
66- **Keywords**: 5-6 required
67- **Refs**: Author-year (Harvard style)
68- **Style**: Technical, detailed methods OK
69
70### GSA Bulletin
71- **Length**: 8,000-12,000 words
72- **Abstract**: 250 words
73- **Refs**: Author-year, GSA style
74- **Supplementary**: Encouraged for data
75- **Style**: Regional focus, detailed stratigraphy
76
77## Citation Formatting
78
79### Author-Year (Harvard/GSA)
80```
81In-text: (Smith and Jones, 2020) or Smith and Jones (2020)
82Multiple: (Smith, 2018; Jones, 2019; Chen et al., 2020)
83Three+ authors: (Chen et al., 2020)
84
85Reference list:
86Smith, J.A., and Jones, B.C., 2020, Title of paper: Journal Name, v. 50, p. 100-120, doi:10.1234/example.
87```
88
89### Numbered (Nature)
90```
91In-text: Previous work¹⁻³ showed...
92
93Reference list:
941. Smith, J.A. & Jones, B.C. Title of paper. J. Name 50, 100-120 (2020).
95```
96
97### Database Citations
98
99**SISAL v3**:
100> Comas-Bru, L., et al. (2020). SISALv2: A comprehensive speleothem isotope database with multiple age-depth models. Earth System Science Data, 12, 2579-2606.
101
102**USGS Earthquake Catalog**:
103> U.S. Geological Survey (2023). Earthquake Hazards Program. https://earthquake.usgs.gov
104
105**DISS**:
106> DISS Working Group (2021). Database of Individual Seismogenic Sources (DISS), Version 3.3.1: A compilation of potential sources for earthquakes larger than M 5.5 in Italy and surrounding areas. https://diss.ingv.it
107
108## DOI Resolution
109
110To get citation metadata from DOI:
1111. Use CrossRef API: `https://api.crossref.org/works/{DOI}`
1122. Extract: authors, title, journal, year, volume, pages
1133. Format according to target journal style
114
115**Example**:
116```
117DOI: 10.1038/ngeo2681
118→ Toohey, M. & Sigl, M. Volcanic stratospheric sulfur injections and aerosol optical depth from 500 BCE to 1900 CE. Earth Syst. Sci. Data 9, 809-831 (2017).
119```
120
121## Figure Standards
122
123### General Guidelines
124- **Resolution**: 300+ DPI for publication
125- **Width**: Single column (8.5 cm) or double (17.5 cm)
126- **Font**: Sans-serif (Arial, Helvetica), 8-10 pt
127- **Colors**: Colorblind-friendly palette
128- **Labels**: A, B, C for panels (bold, upper left)
129
130### Required Figures for Paleoseismic Paper
1311. **Location map**: Study site with tectonic context
1322. **Stratigraphic column**: Sample positions, ages
1333. **Time series**: Main proxy data with anomalies marked
1344. **Discrimination plot**: Seismic vs climatic signals
1355. **Correlation figure**: Cross-validation evidence
136
137### Figure Captions
138- First sentence: What the figure SHOWS
139- Subsequent: Methods, abbreviations, interpretation hints
140- No conclusions in captions
141
142## Table Standards
143
144- Horizontal lines only (no vertical)
145- Units in header, not cells
146- Footnotes for exceptions (a, b, c)
147- Round to appropriate precision
148
149## Supplementary Materials
150
151### What to Include
152- Extended methods (lab protocols, code)
153- Additional figures (supporting evidence)
154- Data tables (raw measurements)
155- Sensitivity analyses
156
157### What to Keep in Main Text
158- Key results
159- Essential methods
160- Most compelling figures
161
162## Writing Tips
163
164### Clarity
165- One idea per sentence
166- Active voice preferred
167- Define acronyms on first use
168- Avoid jargon when possible
169
170### Hedging Language
171- "We suggest that..." (uncertainty)
172- "Our data are consistent with..." (not proof)
173- "One interpretation is..." (alternatives exist)
174
175### Transitions
176- "Building on this..."
177- "In contrast to X..."
178- "These findings suggest..."
179- "Taken together..."
180
181## Checklist Before Submission
182
183- [ ] Word count within limits
184- [ ] All figures/tables referenced in text
185- [ ] References formatted correctly
186- [ ] Data availability statement included
187- [ ] Author contributions listed
188- [ ] Conflicts of interest declared
189- [ ] Cover letter written
190- [ ] Suggested reviewers listed