Update Target Projects

Update Target Projects

Discover and sync all toolkit-using projects, the Codex CLI skill pack, and global Conductor skill symlinks with the latest skills.

Trigger

Use this skill when:

• The post-commit hook reminds you to sync after skill changes
• You want to batch-sync multiple projects at once
• You need to check which projects are out of date
• You want to update the Codex CLI skill pack
• You want to verify global skill symlinks for Conductor autocomplete

Configuration

Codex skill pack location:

1. $CODEX_HOME/skills if CODEX_HOME is set
2. ~/.codex/skills (default)

Project search paths:

1. $TOOLKIT_SEARCH_PATH environment variable (colon-separated paths)
2. ~/Projects (default)

Search depth: 4 levels (finds ~/Projects/*/, ~/Projects/*/*/, and ~/Projects/*/*/*/)

Global skills location: ~/.claude/skills/ (symlinks for Conductor autocomplete)

Workflow

Copy this checklist and track progress:

Update Target Projects Progress:
- [ ] Phase 1: Discover projects with toolkit-version.json
- [ ] Phase 1b: Check Codex CLI skill pack status
- [ ] Phase 1c: Check global skill symlinks (Conductor autocomplete)
- [ ] Phase 1d: Detect orphaned skills (removed from toolkit)
- [ ] Phase 1e: Check workstream scripts status
- [ ] Phase 1f: Check skill resolution mode for each project
- [ ] Phase 2: Detect activity status for each project
- [ ] Phase 3: Check sync status (OUTDATED vs CURRENT)
- [ ] Phase 4: Display status report (including orphans, global status, and resolution)
- [ ] Phase 5: User selection (what to sync)
- [ ] Phase 6a: Sync Codex skill pack (if selected) — includes deletions
- [ ] Phase 6b: Sync global skill symlinks (if selected)
- [ ] Phase 6c: Sync target projects (if selected) — includes deletions
- [ ] Phase 6d: Sync workstream scripts (if selected)
- [ ] Phase 6g: Sync Codex App setup wrapper (if selected)
- [ ] Phase 6e: Adopt global skills (if selected) — migrate local to global
- [ ] Phase 6f: Revert to local skills (if selected) — copy from global back to project
- [ ] Phase 7: Generate summary report

Phase 1: Discover Projects

See PROJECT_SYNC.md for detailed discovery and sync logic.

1. Find all toolkit-version.json files in search paths
2. Read each file and verify toolkit_location matches
3. Extract toolkit_commit and last_sync timestamps

Phase 1b: Check Codex CLI Skill Pack

See CODEX_SYNC.md for detailed Codex sync logic.

1. Discover skills dynamically from toolkit
2. Classify each skill: MISSING, SYMLINK_CURRENT, COPY_OUTDATED, etc.
3. Determine overall Codex status

Phase 1c: Check Global Skill Symlinks

See GLOBAL_SYNC.md for detailed global sync logic.

1. Scan ~/.claude/skills/ for existing entries
2. Classify each: SYMLINK_CURRENT, MISSING, SYMLINK_OTHER, REAL_DIR
3. Detect orphaned symlinks (pointing to deleted toolkit skills)
4. Determine overall global status

Phase 1e: Check Workstream Scripts Status

Detect .workstream/ scripts in target projects and compare file hashes with toolkit:

1. Check if target has .workstream/ directory
2. For each script (lib.sh, setup.sh, dev.sh, verify.sh, README.md):
   • Compare SHA256 hash with toolkit version
   • Classify: MISSING, CURRENT, OUTDATED
3. Check workstream.json.example separately (it's a reference, not a project file)
4. Track status in toolkit-version.json under a "workstream" key

Status determination:

• MISSING — no .workstream/ directory in target
• CURRENT — all script hashes match toolkit
• OUTDATED — one or more scripts differ from toolkit

Phase 1f: Check Skill Resolution Mode

For each target project, determine current skill resolution state:

check_project_resolution() {
  local project_path="$1"
  local version_file="$project_path/.claude/toolkit-version.json"
  local skills_dir="$project_path/.claude/skills"

  # Read current resolution from config
  local resolution=$(jq -r '.skill_resolution // "unknown"' "$version_file" 2>/dev/null)
  local force_local=$(jq -r '.force_local_skills // null' "$version_file" 2>/dev/null)

  # Check actual state: are there local skill directories?
  local has_local_skills=false
  local local_count=0
  if [[ -d "$skills_dir" ]]; then
    local_count=$(find "$skills_dir" -maxdepth 1 -mindepth 1 -type d 2>/dev/null | wc -l)
    if [[ "$local_count" -gt 0 ]]; then
      has_local_skills=true
    fi
  fi

  # Check if global symlinks are healthy
  local globals_healthy=false
  if all_skills_globally_usable 2>/dev/null; then
    globals_healthy=true
  fi

  # Respect force_local_skills override
  if [[ "$force_local" == "true" ]]; then
    echo "LOCAL_FORCED"
    return
  fi

  # Determine resolution state
  if [[ "$has_local_skills" == "true" ]]; then
    if [[ "$globals_healthy" == "true" ]]; then
      echo "ADOPTABLE"  # Can migrate to global
    else
      echo "LOCAL"  # Must stay local (globals not ready)
    fi
  else
    # No local skills
    if [[ "$globals_healthy" == "true" ]]; then
      echo "GLOBAL"  # Resolving via global symlinks
    else
      echo "MISSING"  # Neither local nor global available!
    fi
  fi
}

Phase 1d: Detect Orphaned Skills

Identify skills that exist in targets but have been removed from toolkit:

1. Compare installed skills against current toolkit skills
2. Mark as ORPHANED if skill directory no longer exists in toolkit
3. Check if orphaned skills have local modifications

See CODEX_SYNC.md and PROJECT_SYNC.md for orphan detection logic.

Phase 2-3: Activity and Sync Status

For each project:

• Classify activity: ACTIVE (uncommitted), RECENT (modified <24h), DORMANT
• Check if sync needed by comparing commits

Phase 4: Display Status Report

TOOLKIT SYNC STATUS
===================
Toolkit: /path/to/toolkit
Current: abc1234 (2026-01-23)

GLOBAL SKILLS (Conductor Autocomplete)
───────────────────────────────────────
Location: ~/.claude/skills
Status:   CURRENT (30 symlinks active)

CODEX CLI SKILL PACK
────────────────────
Location: ~/.codex/skills
Status:   {status summary}

TARGET PROJECTS
───────────────
  #  Project          Sync Status   Resolution   Adoptable   Activity
  ─────────────────────────────────────────────────────────────────────
  1  ~/Projects/app   OUTDATED      local        ✓ (30 dirs) DORMANT
  2  ~/Projects/api   CURRENT       global       —           RECENT
  3  ~/Projects/lib   CURRENT       local        ⚠️ 2 modified ACTIVE

Resolution column values:

• global — Skills resolve via ~/.claude/skills/ symlinks
• local — Skills copied to project's .claude/skills/
• mixed — Some global, some local

Adoptable column values:

• ✓ (N dirs) — Can adopt global resolution (N skill directories to remove)
• ⚠️ N modified — Can adopt, but N skills have local modifications
• — — Already using global resolution (or not applicable)

Phase 5: User Selection

Prompt with options:

1. Sync everything (Recommended)
2. Global skill symlinks only
3. Codex skill pack only
4. Target projects only
5. Select specific items
6. Include ACTIVE projects too
7. Skip for now
8. Adopt global skills (remove local copies, switch to global resolution)
9. Revert to local skills (copy from global back to project)

Option 8 visibility: Only show if at least one project is ADOPTABLE (has local copies and global symlinks are healthy).

Option 9 visibility: Only show if at least one project uses global resolution.

Phase 6: Execute Sync

6a: Codex Sync — See CODEX_SYNC.md 6b: Global Skills Sync — See GLOBAL_SYNC.md 6c: Project Sync — See PROJECT_SYNC.md

6d: Workstream Scripts Sync — Copy .workstream/*.sh, README.md, and workstream.json.example to target projects:

1. For each target project selected for sync:
   • Create .workstream/ directory if missing
   • Copy scripts: lib.sh, setup.sh, dev.sh, verify.sh
   • Copy documentation: README.md, workstream.json.example
   • Run chmod +x .workstream/*.sh
2. Compare hashes before copying — skip if CURRENT
3. Update toolkit-version.json "workstream" key with new hashes
4. Do NOT copy or overwrite workstream.json (project-owned config)

6g: Codex App Setup Wrapper Sync — Copy .codex/setup.sh to target projects:

1. For each target project selected for sync:
   • Create .codex/ directory if missing
   • Copy setup.sh from toolkit .codex/setup.sh
   • Run chmod +x .codex/setup.sh
2. Compare hashes before copying — skip if CURRENT
3. Do NOT overwrite .codex/environments/ or other Codex App config (project-owned)

6e: Adopt Global Skills — Migrate from local to global resolution:

See GLOBAL_SYNC.md for state model and helper definitions.

Pre-flight checks:

1. Verify global health: all_skills_globally_usable() must return true
2. If unhealthy: abort with message "Global symlinks not healthy. Run sync first (option 1)."

For each selected project:

1. Detect modified local skills — skills where current hash ≠ stored hash:

   find_modified_skills() {
     local project_path="$1"
     local modified=()
     for skill in $(ls "$project_path/.claude/skills/" 2>/dev/null); do
       local stored_hash=$(jq -r ".files[\".claude/skills/$skill/SKILL.md\"].hash // empty" \
         "$project_path/.claude/toolkit-version.json")
       if [[ -n "$stored_hash" ]]; then
         local current_hash=$(shasum -a 256 "$project_path/.claude/skills/$skill/SKILL.md" | cut -d' ' -f1)
         if [[ "$current_hash" != "$stored_hash" ]]; then
           modified+=("$skill")
         fi
       fi
     done
     echo "${modified[@]}"
   }
   

2. Show migration preview:

   ADOPT GLOBAL SKILLS: ~/Projects/app
   ────────────────────────────────────
   Will remove:     30 skill directories
   Modified skills: 2 (will be backed up)
   After migration: Skills resolve via ~/.claude/skills/
   
   ⚠️  This project will no longer contain .claude/skills/.
       Collaborators without ~/.claude/skills/ will lose access.
   
   Proceed? [y/N]
   

3. If user confirms:

   • Back up modified skills to .claude/skills.bak/{skill}/ (if any)
   • Delete local skill directories:

     # Note: glob must be OUTSIDE quotes to expand
     if [[ -d "$project_path/.claude/skills" ]]; then
       rm -rf "$project_path/.claude/skills/"*/
     fi
     

   • Update toolkit-version.json:
     • Set "skill_resolution": "global"
     • Set each file's "resolution": "global"
   • DO NOT use git rm — let user review and commit

4. Report:

   ✓ Migrated ~/Projects/app to global skill resolution
     Removed: 30 skill directories
     Backed up: 2 modified skills → .claude/skills.bak/
     Skills now resolve via: ~/.claude/skills/
   

6f: Revert to Local Skills — Copy from global back to project:

For projects that were migrated to global but need portability:

1. Show revert preview:

   REVERT TO LOCAL SKILLS: ~/Projects/app
   ───────────────────────────────────────
   Will copy:       30 skills from ~/.claude/skills/
   Target:          .claude/skills/
   After revert:    Skills copied locally for portability
   
   Proceed? [y/N]
   

2. If user confirms:

   • Create .claude/skills/ directory
   • For each globally-resolved skill:
     • Copy from global symlink target to local
   • Update toolkit-version.json:
     • Set "skill_resolution": "local"
     • Set each file's "resolution": "local"
     • Update hashes and timestamps

3. Report:

   ✓ Reverted ~/Projects/app to local skill resolution
     Copied: 30 skills to .claude/skills/
     Skills now resolve via: project-local copies
   

Phase 7: Summary Report

SYNC COMPLETE
=============

Global Skills (Conductor Autocomplete):
  Symlinks created: 2
  Symlinks removed: 1 (orphaned)
  Symlinks repaired: 0
  Already current:  28

Codex CLI Skill Pack:
  Skills updated:  3
  Skills deleted:  1 (orphaned)
  Already current: 12

Target Projects:
  Projects processed: 4
    Synced:  2
    Skipped: 1 (active)
    Current: 1
  Skills deleted: 1 (orphaned)

Resolution Changes:
  Adopted global: 1 project (30 local dirs removed)
  Reverted local: 0 projects
  Modified backed up: 2 skills → .claude/skills.bak/

Deleted Skills (removed from toolkit):
  - multi-model-verify

All synced items are now at toolkit commit abc1234

If projects were migrated:

MIGRATION SUMMARY
─────────────────
Projects migrated to global resolution:
  ✓ ~/Projects/app (30 skills)
  ✓ ~/Projects/api (30 skills)

These projects now use ~/.claude/skills/ symlinks.
Local skill copies have been removed.

Note: Collaborators need ~/.claude/skills/ symlinks to access skills.
Run this from their toolkit clone: /update-target-projects → option 2

Edge Cases

See EDGE_CASES.md for handling:

• Codex directory doesn't exist
• No projects found
• Project uses different toolkit
• Git not available
• Sync conflicts

REMINDER: For projects using local resolution, always copy skills to target projects, not just update toolkit-version.json. The version file tracks state, but skills must actually be copied for changes to take effect. Projects using global resolution don't need local copies—they resolve via ~/.claude/skills/ symlinks.