Use search_models and rank_models to find curated SBML models on BioModels.org.
When to use
User asks for models of a pathway (glycolysis, MAPK, p53)
Need curated-only results (curated_only=True by default)
Tools
search_models(query, num_results=10)
rank_models(query, research_question=...)
get_modelinfo(model_id)
Example
import praisonai_bio
from praisonaiagents import Agent
agent = Agent(name="scout", toolsets=["biomodels-readonly"])
agent.start("Find yeast glycolysis models on BioModels.org")
1---2name: search-models3description: Search BioModels4---5# Search BioModels67Use `search_models` and `rank_models` to find curated SBML models on BioModels.org.89## When to use1011- User asks for models of a pathway (glycolysis, MAPK, p53)12- Need curated-only results (`curated_only=True` by default)1314## Tools1516- `search_models(query, num_results=10)`17- `rank_models(query, research_question=...)`18- `get_modelinfo(model_id)`1920## Example2122```python23import praisonai_bio24from praisonaiagents import Agent2526agent = Agent(name="scout", toolsets=["biomodels-readonly"])27agent.start("Find yeast glycolysis models on BioModels.org")28```
Run npx skillmds@latest add mervinpraison/search-models in your terminal (requires Node.js), paste this page's agent-chat prompt into Claude, Cursor, or any MCP-connected agent, or download the SKILL.md file and copy it into your agent's skills directory.
Search BioModels It is listed under Coding & Dev Tools on SkillMD.
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MervinPraison (@mervinpraison) published this skill. Their other Agent Skills are listed on their SkillMD profile.
MervinPraison