Bioinformatics Paper to PPT
Use this skill to turn a bioinformatics paper or evidence pack into a Chinese group-meeting or journal-club presentation. It emphasizes workflow, evidence, validation, and limitations.
Boundary
This skill does:
- build a slide story from a bioinformatics manuscript, evidence pack, PDF, abstract, figures, tables, or reading notes
- select figures as evidence rather than decoration
- write Chinese slide titles, concise bullets, and speaker notes
- create a PPTX when the user provides sufficient source files or asks for a deck artifact
- route general slide design execution to
scientific-slides when helpful
This skill does not:
- run or verify analyses
- fabricate figure messages, statistical values, datasets, methods, or limitations
- turn every paper section into a slide mechanically
If the source evidence is incomplete, build a plan with placeholders and missing-source flags.
When to open extra files
| File |
Open when |
| references/bio-slide-structures.md |
Choosing slide structure for omics, method, resource, or biomarker papers |
Workflow
- Identify audience and length. Default to 10-14 slides for a 15-20 minute Chinese group meeting unless specified.
- Classify paper type. Omics discovery, atlas/resource, computational method, biomarker, mechanism, or review.
- Build story spine.
problem -> gap -> data/workflow -> key evidence -> validation -> contribution -> limitations -> discussion.
- Select figures. Prefer figures that directly support the story; crop or describe only supplied panels.
- Draft slides in Chinese. Preserve gene/protein/tool/dataset names in English when clearer.
- Add speaker notes. Include what to explain, what to be cautious about, and discussion prompts.
- If creating PPTX, audit density and readability. Avoid text overflow and repeated generic layouts.
Output format
For planning mode:
Slide plan
| # | Title | Visual/evidence | Key message | Notes |
|---|---|---|---|---|
Missing assets
- ...
For deck mode, provide the PPTX path, source assets used, and a short QA report.
1---2name: bio-paper2ppt3description: Create Chinese presentation plans or PPTX decks from bioinformatics papers, EVIDENCE_PACK.md, figures, tables, abstracts, or reading notes. Use for 生信论文转PPT, 组会汇报, journal club, 多组学/单细胞/算法论文汇报. Focus on story, workflow, evidence figures, limitations, and discussion questions; do not run analyses or fabricate results.4---56# Bioinformatics Paper to PPT78Use this skill to turn a bioinformatics paper or evidence pack into a Chinese group-meeting or journal-club presentation. It emphasizes workflow, evidence, validation, and limitations.910## Boundary1112This skill does:1314- build a slide story from a bioinformatics manuscript, evidence pack, PDF, abstract, figures, tables, or reading notes15- select figures as evidence rather than decoration16- write Chinese slide titles, concise bullets, and speaker notes17- create a PPTX when the user provides sufficient source files or asks for a deck artifact18- route general slide design execution to `scientific-slides` when helpful1920This skill does **not**:2122- run or verify analyses23- fabricate figure messages, statistical values, datasets, methods, or limitations24- turn every paper section into a slide mechanically2526If the source evidence is incomplete, build a plan with placeholders and missing-source flags.2728## When to open extra files2930| File | Open when |31|---|---|32| [references/bio-slide-structures.md](references/bio-slide-structures.md) | Choosing slide structure for omics, method, resource, or biomarker papers |3334## Workflow35361. **Identify audience and length.** Default to 10-14 slides for a 15-20 minute Chinese group meeting unless specified.372. **Classify paper type.** Omics discovery, atlas/resource, computational method, biomarker, mechanism, or review.383. **Build story spine.** `problem -> gap -> data/workflow -> key evidence -> validation -> contribution -> limitations -> discussion`.394. **Select figures.** Prefer figures that directly support the story; crop or describe only supplied panels.405. **Draft slides in Chinese.** Preserve gene/protein/tool/dataset names in English when clearer.416. **Add speaker notes.** Include what to explain, what to be cautious about, and discussion prompts.427. **If creating PPTX, audit density and readability.** Avoid text overflow and repeated generic layouts.4344## Output format4546For planning mode:4748```text49Slide plan50| # | Title | Visual/evidence | Key message | Notes |51|---|---|---|---|---|5253Missing assets54- ...55```5657For deck mode, provide the PPTX path, source assets used, and a short QA report.
Teng-bio