Bio Research Auto Router
Use this lightweight router when the user gives a natural, vague, or mixed life-science/bioinformatics request and does not name a specific skill.
The goal is to choose the right lane automatically:
facts / analysis / validation / reproduction / evidence -> evidence lane
manuscript prose / polishing / reviewer response / availability / PPT -> writing lane
mixed request -> evidence first, writing second
First decision
| User intent clue | Route |
|---|---|
| 查、验证、分析、跑、复现、QC、accession、GEO/SRA、数据库、基因/蛋白/通路事实 | bioinfo-evidence-orchestrator or existing specialist skills |
| “这些结果能不能写文章”, “写论文前整理一下”, “帮我看看结果靠谱吗” | bioinfo-evidence-orchestrator first |
| 写 abstract/introduction/discussion/title/outline/整篇文章 | bio-paper-writing |
| 根据图、表、结果、figure legend 写 Results | bio-results-writing |
| 写材料与方法、Methods、workflow 写法、软件参数描述 | bio-methods-writing |
| 润色、中译英、改段落、SCI 语言、术语统一、overclaim 检查 | bio-polishing |
| 审稿意见、rebuttal、大修/小修、batch effect/FDR/外部验证/数据泄露质疑 | bio-reviewer-response |
| Data Availability、Code Availability、数据/代码上传、GEO/SRA/ENA/BioProject/BioSample/PRIDE/GitHub/Zenodo | bio-data-code-availability |
| 组会 PPT、journal club、论文汇报、paper to PPT | bio-paper2ppt |
| “文献是怎么做的”, “参考文献的做法”, 从文献找方法/数据/补充材料 | literature-method-data-miner |
| PubMed、MeSH、找医学文献 | pubmed-database or auto-deep-research |
| RNA-seq/DESeq2、富集、序列、蛋白结构、系统发育 | relevant tooluniverse-* specialist skill |
| 论文代码怎么跑、仓库复现、README-first reproduction | repo-intake-and-plan -> env-and-assets-bootstrap -> minimal-run-and-audit |
Default rules for vague prompts
- If the user says “能不能写文章/有没有价值/下一步怎么做” and provides results or datasets, create or request an
EVIDENCE_PACK.mdfirst. - If the user provides prose and asks “改一下/润色/更像论文”, use writing/polishing, not analysis.
- If the user asks “分析并写”, split into two phases: evidence first, writing second.
- If a requested writing claim lacks evidence, flag the gap instead of inventing support.
- Ask a clarification question only when choosing the wrong lane would be risky. Otherwise infer and proceed.
Optional reference
Open references/vague-prompt-map.md when testing or tuning natural-language routing examples.
Default output when routing only
我会按这个任务类型处理:<chosen lane / skill>
原因:<1 sentence>
下一步产物:<EVIDENCE_PACK.md / Results draft / Methods draft / response tracker / PPT plan / etc.>