Reporting Standards (jama-reporting-standards)
When to trigger
- You know the design and need the matching EQUATOR checklist
- A flow diagram is missing (participant flow for RCTs, study selection for reviews)
- You are unsure which guideline applies (CONSORT vs STROBE vs PRISMA vs STARD)
- Preparing the checklist file required at submission
Design → guideline map
| Design |
EQUATOR guideline |
Mandatory diagram |
| Randomized clinical trial |
CONSORT |
CONSORT participant-flow diagram |
| Observational (cohort, case-control, cross-sectional) |
STROBE |
Participant-flow diagram strongly expected |
| Systematic review ± meta-analysis |
PRISMA |
PRISMA study-selection flow diagram |
| Diagnostic-accuracy study |
STARD |
STARD participant-flow diagram |
| Study protocol |
SPIRIT |
Schedule of enrollment/assessments |
| Prediction model |
TRIPOD |
— |
| Quality-improvement study |
SQUIRE |
— |
| Other designs |
The matching EQUATOR guideline |
per guideline |
Always check the EQUATOR Network and JAMA's Instructions for Authors for the current guideline list and any JAMA-specific extensions or required checklist file.
What each core guideline forces you to report
CONSORT (RCTs)
- Title states "randomized"; structured abstract follows CONSORT-for-abstracts
- Trial design, allocation ratio, eligibility, settings; any changes after start
- Randomization (sequence, concealment, implementation) and blinding
- Numbers randomized, received intervention, analyzed, and lost — in the flow diagram
- Primary/secondary outcomes with estimated effect size and precision (CI)
- Harms, registration number, protocol availability, funding
STROBE (observational)
- Study design stated early; setting, eligibility, sources, follow-up
- All variables (outcomes, exposures, confounders, effect modifiers) defined
- Bias mitigation, sample-size logic, statistical methods incl. confounding
- Numbers at each stage, descriptive data, and unadjusted and adjusted estimates
PRISMA (systematic reviews / meta-analyses)
- Protocol/registration; explicit eligibility and information sources
- Full reproducible search strategy; selection and data-extraction process
- Risk-of-bias methods; synthesis methods; the study-selection flow diagram
- Certainty-of-evidence assessment (e.g., GRADE)
STARD (diagnostic accuracy)
- Index test and reference standard with rationale and thresholds
- Participant flow and timing; cross-tabulation of results vs reference
- Estimates of accuracy with CIs; handling of indeterminate results
Checklist
Anti-patterns
- Submitting an RCT with no CONSORT flow diagram
- A systematic review with no PRISMA diagram or no reproducible search
- Filling the checklist with page numbers that do not match the text
- Picking STROBE for a randomized trial (or CONSORT for a cohort)
- Reporting only adjusted estimates in an observational study
- Ignoring the abstract-level extension (e.g., CONSORT-for-abstracts)
Worked example: matching design to checklist (illustrative)
Vignette (illustrative): a multicenter randomized clinical trial, N = 2,800 adults with sepsis, primary outcome 90-day mortality, absolute risk difference -3.1 percentage points (95% CI, -5.8 to -0.4). At the Journal of the American Medical Association this maps to CONSORT with a mandatory participant-flow diagram accounting for everyone screened, randomized, and analyzed; the completed CONSORT checklist must carry page/line locations, the title must state "randomized," and the abstract follows CONSORT-for-abstracts. Had the same question been answered by a cohort, the map would shift to STROBE with both unadjusted and adjusted estimates; a systematic review would shift to PRISMA with a study-selection diagram and a GRADE certainty assessment.
Reviewer pushback and the JAMA fix
- "Reporting incomplete (CONSORT/PRISMA item X)." Fix: add the item and update the checklist's page/line location to match the revised text.
- "Picked STROBE for a randomized trial." Fix: re-map to CONSORT; the design, not convenience, fixes the guideline.
- "Only adjusted estimates reported (observational)." Fix: report unadjusted and adjusted estimates per STROBE.
Calibration anchors (hedge where uncertain): the design-to-guideline mapping and the mandatory flow diagram for RCTs and reviews are durable; JAMA-specific extensions and required checklist files evolve — confirm against the EQUATOR Network and current author guidelines.
Reporting pass for JAMA
Run this as a concrete capability pass. First lock the clinical question, patient population, estimand or endpoint, safety/ethics issue, and reporting checklist; then test whether the manuscript addresses clinical reviewers who ask whether the evidence changes patient care, policy, or medical decision-making while satisfying reporting standards.
- Primary move: Tie every reporting checklist item to a manuscript location; missing registration, denominator, consent, data, or code statements must be explicit blockers.
- Decision ledger: return
claim / evidence / blocker / next edit rows so the next pass can patch the manuscript directly.
- Sibling comparison: compare against NEJM for field-changing clinical medicine, Lancet for global-health breadth, specialty journals for narrower clinical domains; if the neighboring outlet has the stronger audience claim, recommend re-routing before polishing.
- Verification floor: before submission-ready advice, re-open
resources/official-source-map.md for volatile rules and name the one unresolved fact that could change the recommendation.
Output format
【Design】...
【Guideline】CONSORT / STROBE / PRISMA / STARD / other
【Flow diagram drafted】yes / no
【Checklist file complete with locations】yes / no
【Items still unreported】...
【Next skill】jama-statistics
Source: brycewang-stanford/Awesome-Journal-Skills → JAMA-Skills/skills/jama-reporting-standards/SKILL.md
1---2name: jama-reporting-standards3description: Use when selecting and completing the EQUATOR-network reporting checklist and flow diagram for a JAMA manuscript (CONSORT, STROBE, PRISMA, STARD, and design-specific guidelines). Maps design to checklist; it does NOT design the study or write the statistics.4---567# Reporting Standards (jama-reporting-standards)89## When to trigger1011- You know the design and need the matching EQUATOR checklist12- A flow diagram is missing (participant flow for RCTs, study selection for reviews)13- You are unsure which guideline applies (CONSORT vs STROBE vs PRISMA vs STARD)14- Preparing the checklist file required at submission1516## Design → guideline map1718| Design | EQUATOR guideline | Mandatory diagram |19|------------------------------------------|-------------------|--------------------------------------------|20| Randomized clinical trial | CONSORT | CONSORT participant-flow diagram |21| Observational (cohort, case-control, cross-sectional) | STROBE | Participant-flow diagram strongly expected |22| Systematic review ± meta-analysis | PRISMA | PRISMA study-selection flow diagram |23| Diagnostic-accuracy study | STARD | STARD participant-flow diagram |24| Study protocol | SPIRIT | Schedule of enrollment/assessments |25| Prediction model | TRIPOD | — |26| Quality-improvement study | SQUIRE | — |27| Other designs | The matching EQUATOR guideline | per guideline |2829Always check the EQUATOR Network and JAMA's Instructions for Authors for the current guideline list and any JAMA-specific extensions or required checklist file.3031## What each core guideline forces you to report3233### CONSORT (RCTs)34- Title states "randomized"; structured abstract follows CONSORT-for-abstracts35- Trial design, allocation ratio, eligibility, settings; any changes after start36- Randomization (sequence, concealment, implementation) and blinding37- Numbers randomized, received intervention, analyzed, and lost — in the **flow diagram**38- Primary/secondary outcomes with estimated effect size and precision (CI)39- Harms, registration number, protocol availability, funding4041### STROBE (observational)42- Study design stated early; setting, eligibility, sources, follow-up43- All variables (outcomes, exposures, confounders, effect modifiers) defined44- Bias mitigation, sample-size logic, statistical methods incl. confounding45- Numbers at each stage, descriptive data, and unadjusted **and** adjusted estimates4647### PRISMA (systematic reviews / meta-analyses)48- Protocol/registration; explicit eligibility and information sources49- Full reproducible search strategy; selection and data-extraction process50- Risk-of-bias methods; synthesis methods; the **study-selection flow diagram**51- Certainty-of-evidence assessment (e.g., GRADE)5253### STARD (diagnostic accuracy)54- Index test and reference standard with rationale and thresholds55- Participant flow and timing; cross-tabulation of results vs reference56- Estimates of accuracy with CIs; handling of indeterminate results5758## Checklist5960- [ ] Correct guideline chosen for the design61- [ ] Completed checklist file prepared with page/line numbers for each item62- [ ] Required flow diagram drafted (CONSORT / PRISMA / STARD / STROBE)63- [ ] Title and abstract conform to the abstract-level extension where one exists64- [ ] Registration number and protocol availability reported where required65- [ ] Adjusted and unadjusted estimates both reported (observational)66- [ ] Certainty-of-evidence / risk-of-bias reported (reviews, observational)6768## Anti-patterns6970- Submitting an RCT with no CONSORT flow diagram71- A systematic review with no PRISMA diagram or no reproducible search72- Filling the checklist with page numbers that do not match the text73- Picking STROBE for a randomized trial (or CONSORT for a cohort)74- Reporting only adjusted estimates in an observational study75- Ignoring the abstract-level extension (e.g., CONSORT-for-abstracts)767778## Worked example: matching design to checklist (illustrative)7980Vignette (illustrative): a multicenter randomized clinical trial, N = 2,800 adults with sepsis, primary outcome 90-day mortality, absolute risk difference -3.1 percentage points (95% CI, -5.8 to -0.4). At the Journal of the American Medical Association this maps to CONSORT with a mandatory participant-flow diagram accounting for everyone screened, randomized, and analyzed; the completed CONSORT checklist must carry page/line locations, the title must state "randomized," and the abstract follows CONSORT-for-abstracts. Had the same question been answered by a cohort, the map would shift to STROBE with both unadjusted and adjusted estimates; a systematic review would shift to PRISMA with a study-selection diagram and a GRADE certainty assessment.8182## Reviewer pushback and the JAMA fix8384- "Reporting incomplete (CONSORT/PRISMA item X)." Fix: add the item and update the checklist's page/line location to match the revised text.85- "Picked STROBE for a randomized trial." Fix: re-map to CONSORT; the design, not convenience, fixes the guideline.86- "Only adjusted estimates reported (observational)." Fix: report unadjusted and adjusted estimates per STROBE.8788Calibration anchors (hedge where uncertain): the design-to-guideline mapping and the mandatory flow diagram for RCTs and reviews are durable; JAMA-specific extensions and required checklist files evolve — confirm against the EQUATOR Network and current author guidelines.8990## Reporting pass for JAMA9192Run this as a concrete capability pass. First lock the clinical question, patient population, estimand or endpoint, safety/ethics issue, and reporting checklist; then test whether the manuscript addresses clinical reviewers who ask whether the evidence changes patient care, policy, or medical decision-making while satisfying reporting standards.9394- **Primary move:** Tie every reporting checklist item to a manuscript location; missing registration, denominator, consent, data, or code statements must be explicit blockers.95- **Decision ledger:** return `claim / evidence / blocker / next edit` rows so the next pass can patch the manuscript directly.96- **Sibling comparison:** compare against NEJM for field-changing clinical medicine, Lancet for global-health breadth, specialty journals for narrower clinical domains; if the neighboring outlet has the stronger audience claim, recommend re-routing before polishing.97- **Verification floor:** before submission-ready advice, re-open `resources/official-source-map.md` for volatile rules and name the one unresolved fact that could change the recommendation.9899## Output format100101```102【Design】...103【Guideline】CONSORT / STROBE / PRISMA / STARD / other104【Flow diagram drafted】yes / no105【Checklist file complete with locations】yes / no106【Items still unreported】...107【Next skill】jama-statistics108```109110---111112**Source:** [`brycewang-stanford/Awesome-Journal-Skills`](https://github.com/brycewang-stanford/Awesome-Journal-Skills) → `JAMA-Skills/skills/jama-reporting-standards/SKILL.md`