Pinecone

Pinecone - Managed Vector Database

The vector database for production AI applications.

When to use Pinecone

Use when:

• Need managed, serverless vector database
• Production RAG applications
• Auto-scaling required
• Low latency critical (<100ms)
• Don't want to manage infrastructure
• Need hybrid search (dense + sparse vectors)

Metrics:

• Fully managed SaaS
• Auto-scales to billions of vectors
• p95 latency <100ms
• 99.9% uptime SLA

Use alternatives instead:

• Chroma: Self-hosted, open-source
• FAISS: Offline, pure similarity search
• Weaviate: Self-hosted with more features

Quick start

Installation

pip install pinecone

Note: the old pinecone-client package is deprecated. Install pinecone (v5+; current 9.x). The import stays from pinecone import Pinecone.

Basic usage

from pinecone import Pinecone, ServerlessSpec

# Initialize
pc = Pinecone(api_key="your-api-key")

# Create index
pc.create_index(
    name="my-index",
    dimension=1536,  # Must match embedding dimension
    metric="cosine",  # or "euclidean", "dotproduct"
    spec=ServerlessSpec(cloud="aws", region="us-east-1")
)

# Connect to index
index = pc.Index("my-index")

# Upsert vectors
index.upsert(vectors=[
    {"id": "vec1", "values": [0.1, 0.2, ...], "metadata": {"category": "A"}},
    {"id": "vec2", "values": [0.3, 0.4, ...], "metadata": {"category": "B"}}
])

# Query
results = index.query(
    vector=[0.1, 0.2, ...],
    top_k=5,
    include_metadata=True
)

print(results["matches"])

Core operations

Create index

# Serverless (recommended)
pc.create_index(
    name="my-index",
    dimension=1536,
    metric="cosine",
    spec=ServerlessSpec(
        cloud="aws",         # or "gcp", "azure"
        region="us-east-1"
    )
)

# Pod-based (for consistent performance)
from pinecone import PodSpec

pc.create_index(
    name="my-index",
    dimension=1536,
    metric="cosine",
    spec=PodSpec(
        environment="us-east1-gcp",
        pod_type="p1.x1"
    )
)

Upsert vectors

# Single upsert
index.upsert(vectors=[
    {
        "id": "doc1",
        "values": [0.1, 0.2, ...],  # 1536 dimensions
        "metadata": {
            "text": "Document content",
            "category": "tutorial",
            "timestamp": "2025-01-01"
        }
    }
])

# Batch upsert (recommended)
vectors = [
    {"id": f"vec{i}", "values": embedding, "metadata": metadata}
    for i, (embedding, metadata) in enumerate(zip(embeddings, metadatas))
]

index.upsert(vectors=vectors, batch_size=100)

Query vectors

# Basic query
results = index.query(
    vector=[0.1, 0.2, ...],
    top_k=10,
    include_metadata=True,
    include_values=False
)

# With metadata filtering
results = index.query(
    vector=[0.1, 0.2, ...],
    top_k=5,
    filter={"category": {"$eq": "tutorial"}}
)

# Namespace query
results = index.query(
    vector=[0.1, 0.2, ...],
    top_k=5,
    namespace="production"
)

# Access results
for match in results["matches"]:
    print(f"ID: {match['id']}")
    print(f"Score: {match['score']}")
    print(f"Metadata: {match['metadata']}")

Metadata filtering

# Exact match
filter = {"category": "tutorial"}

# Comparison
filter = {"price": {"$gte": 100}}  # $gt, $gte, $lt, $lte, $ne

# Logical operators
filter = {
    "$and": [
        {"category": "tutorial"},
        {"difficulty": {"$lte": 3}}
    ]
}  # Also: $or

# In operator
filter = {"tags": {"$in": ["python", "ml"]}}

Namespaces

# Partition data by namespace
index.upsert(
    vectors=[{"id": "vec1", "values": [...]}],
    namespace="user-123"
)

# Query specific namespace
results = index.query(
    vector=[...],
    namespace="user-123",
    top_k=5
)

# List namespaces
stats = index.describe_index_stats()
print(stats['namespaces'])

Hybrid search (dense + sparse)

# Upsert with sparse vectors
index.upsert(vectors=[
    {
        "id": "doc1",
        "values": [0.1, 0.2, ...],  # Dense vector
        "sparse_values": {
            "indices": [10, 45, 123],  # Token IDs
            "values": [0.5, 0.3, 0.8]   # TF-IDF scores
        },
        "metadata": {"text": "..."}
    }
])

# Hybrid query
# NOTE: index.query() does NOT accept an `alpha` kwarg. Pinecone stores a
# single sparse-dense vector, so weighting must be applied by pre-scaling the
# query vectors before sending them. Use the hybrid_score_norm helper below
# (alpha * dense + (1 - alpha) * sparse; alpha=1 → pure dense, 0 → pure sparse).

def hybrid_score_norm(dense, sparse, alpha: float):
    """Scale dense/sparse query vectors for weighted hybrid search."""
    if not 0 <= alpha <= 1:
        raise ValueError("alpha must be between 0 and 1")
    scaled_sparse = {
        "indices": sparse["indices"],
        "values": [v * (1 - alpha) for v in sparse["values"]],
    }
    return [v * alpha for v in dense], scaled_sparse

hdense, hsparse = hybrid_score_norm(
    dense=[0.1, 0.2, ...],
    sparse={"indices": [10, 45], "values": [0.5, 0.3]},
    alpha=0.5,  # 0=sparse, 1=dense, 0.5=balanced
)

results = index.query(
    vector=hdense,
    sparse_vector=hsparse,
    top_k=5,
)

LangChain integration

from langchain_pinecone import PineconeVectorStore
from langchain_openai import OpenAIEmbeddings

# Create vector store
vectorstore = PineconeVectorStore.from_documents(
    documents=docs,
    embedding=OpenAIEmbeddings(),
    index_name="my-index"
)

# Query
results = vectorstore.similarity_search("query", k=5)

# With metadata filter
results = vectorstore.similarity_search(
    "query",
    k=5,
    filter={"category": "tutorial"}
)

# As retriever
retriever = vectorstore.as_retriever(search_kwargs={"k": 10})

LlamaIndex integration

from llama_index.vector_stores.pinecone import PineconeVectorStore

# Connect to Pinecone
pc = Pinecone(api_key="your-key")
pinecone_index = pc.Index("my-index")

# Create vector store
vector_store = PineconeVectorStore(pinecone_index=pinecone_index)

# Use in LlamaIndex
from llama_index.core import StorageContext, VectorStoreIndex

storage_context = StorageContext.from_defaults(vector_store=vector_store)
index = VectorStoreIndex.from_documents(documents, storage_context=storage_context)

Index management

# List indices
indexes = pc.list_indexes()

# Describe index
index_info = pc.describe_index("my-index")
print(index_info)

# Get index stats
stats = index.describe_index_stats()
print(f"Total vectors: {stats['total_vector_count']}")
print(f"Namespaces: {stats['namespaces']}")

# Delete index
pc.delete_index("my-index")

Delete vectors

# Delete by ID
index.delete(ids=["vec1", "vec2"])

# Delete by filter
index.delete(filter={"category": "old"})

# Delete all in namespace
index.delete(delete_all=True, namespace="test")

# Delete entire index
index.delete(delete_all=True)

Best practices

1. Use serverless - Auto-scaling, cost-effective
2. Batch upserts - More efficient (100-200 per batch)
3. Add metadata - Enable filtering
4. Use namespaces - Isolate data by user/tenant
5. Monitor usage - Check Pinecone dashboard
6. Optimize filters - Index frequently filtered fields
7. Test with free tier - 1 index, 100K vectors free
8. Use hybrid search - Better quality
9. Set appropriate dimensions - Match embedding model
10. Regular backups - Export important data

Performance

Pricing (as of 2025)

Serverless:

• $0.096 per million read units
• $0.06 per million write units
• $0.06 per GB storage/month

Free tier:

• 1 serverless index
• 100K vectors (1536 dimensions)
• Great for prototyping

Resources

• Website: https://www.pinecone.io
• Docs: https://docs.pinecone.io
• Console: https://app.pinecone.io
• Pricing: https://www.pinecone.io/pricing

Source: NousResearch/hermes-agent → optional-skills/mlops/pinecone/SKILL.md