Vc Update

vc-update

Output style: Follow process/development-protocols/communication-standards.md — answer-first, plain language, no unexplained jargon, TL;DR on long responses.

Pull the latest agent harness improvements from the remote vibecode-pro-max-kit repository into the current project.

When to Use

• After being told a new harness version is available
• Periodically to check for updates
• After bootstrapping a project with vc-setup and wanting the latest improvements

Workflow

Follow these steps exactly. Do NOT skip the dry-run or confirmation step.

Step 1: Check Worktree Status

Run git status --porcelain in the project root.

• If output is non-empty: warn the user that they have uncommitted changes and suggest git stash or committing first. Do not block -- continue after warning.
• If output is empty: proceed silently.

Step 2: Read Current Version

Read the file .vc-version in the project root.

• If it exists: store its contents as currentVersion (a semver string like 2.0.4).
• If it does not exist: set currentVersion to "0.0.0" (treat as first update).

Step 3: Clone Remote Repository

# Respect VC_KIT_SOURCE override (local path or alternate URL).
# When unset, defaults to the official remote.
KIT_SOURCE="${VC_KIT_SOURCE:-https://github.com/withkynam/vibecode-pro-max-kit.git}"
VC_UPDATE_TMPDIR="/tmp/vc-update-$(date +%s)"
git clone --local --depth 1 --quiet "$KIT_SOURCE" "$VC_UPDATE_TMPDIR" 2>/dev/null \
  || git clone --depth 1 --quiet "$KIT_SOURCE" "$VC_UPDATE_TMPDIR"
# Note: --local is a no-op for remote URLs (git ignores it); the fallback covers all cases.

VC_KIT_SOURCE — if set, use this path or URL instead of the official remote. Accepts any value accepted by git clone. This enables offline testing (VC_KIT_SOURCE=/path/to/local/kit) and forks/pinned versions.

If the clone fails (network error, auth error, repo not found):

• Print the error message.
• Clean up the temp directory if it was partially created.
• Stop. Do not proceed.

Step 4: Resolve Remote Manifest

Run the resolver script from the cloned repo:

node "$VC_UPDATE_TMPDIR/resolve-manifest.mjs" --root "$VC_UPDATE_TMPDIR" --json

Parse the JSON output to extract:

• files (string[]) -- resolved managed file paths
• merge (string[]) -- files where user customizations are preserved (not overwritten)
• copyIfMissing (string[]) -- files only installed if they don't already exist locally
• strip (string[]) -- files needing content stripping (informational)
• symlinks (object) -- symlink path -> target mappings
• legacyDeletions (string[]) -- paths to delete on migration (present in kit v3.0.0+; absent in older kits)

Extract the remote version from the manifest:

node -e "console.log(JSON.parse(require('fs').readFileSync('$VC_UPDATE_TMPDIR/vc-manifest.json','utf8')).version)"

Retain Step 4 output through Step 7: Keep the full resolver JSON (especially symlinks) in memory. compute-sync-plan.mjs --json (Steps 6/10) does not re-emit symlinks, so Step 7 depends on the Step 4 value.

Legacy fallback: If resolve-manifest.mjs does not exist in the remote (very old kit version), fall back to reading vc-manifest.json directly and using the old managed/managedDirs/seedsDir fields for file resolution.

Step 5: Compare Versions

Compare the remote manifest version against currentVersion.

• If they are equal: do NOT stop yet. Version equality means the deterministic file-sync will be a no-op, but the ADAPTIVE legacy-layout migration (Part D) is NOT version-gated and may still have work to do — e.g. an old project was just brought to the current version by install.sh (which writes .vc-version but cannot run the adaptive migration), leaving legacy-format dirs un-migrated. So on equal versions, run the legacy-artifact scan before deciding:
  • Scan for any of: flat *_PLAN_*.md files directly under process/general-plans/active/ or process/features/*/active/; sibling process/general-plans/{reports,references}/; sibling process/features/*/{reports,references}/; process/development-protocols/references/ (any non-empty legacy layout dir in scope per Part D).
  • If the scan finds ZERO legacy artifacts: report "Already up to date (vX.Y.Z) — no legacy artifacts to migrate", clean up $TMPDIR, and Stop.
  • If the scan finds ANY legacy artifacts: report "Already up to date (vX.Y.Z), but N legacy artifact(s) found — running content migration" and CONTINUE to the diff/apply path. The file diff will be empty (no add/modify/delete), but Part D safe legacy-layout migration MUST run so the legacy content is moved into task folders. Skip the version-bump messaging; the version stays the same.
• If remote is newer (or currentVersion is 0.0.0): continue to diff.
• If remote is older than currentVersion: print ⚠ WARNING: downgrade v{remoteVersion} → v{currentVersion} detected. The source kit is older than your installed version. Continuing will overwrite newer harness files with older ones. then ask for explicit confirmation before continuing. If the user does not confirm, clean up $VC_UPDATE_TMPDIR and stop.

Step 6: Read Local Snapshot and Compute Diff

Computation via compute-sync-plan.mjs: Once the remote manifest is resolved (Step 4), invoke the shared computation core:

node "$VC_UPDATE_TMPDIR/compute-sync-plan.mjs" \
  --root "$PROJECT_ROOT" \
  --kit-root "$VC_UPDATE_TMPDIR" \
  --json

Parse the JSON output: { toAdd, toModify, toDelete, toPreserve, staleWarnings }.

• toAdd — files to copy from kit to project (not yet present or tracked).
• toModify — files to overwrite (tracked, present, content differs).
• toDelete — stale kit files to remove (in old snapshot, not in new ownedPaths, passed namespace guard).
• toPreserve — files to leave untouched (merge/copyIfMissing survivors, user-owned files).
• staleWarnings — paths that were in snapshot but failed namespace guard — print to user; do NOT delete.

The manual snapshot-reading and diff logic in the previous version of this step is replaced by this invocation. The prose description of the algorithm is preserved in references/vc-update.md for reference.

Fallback — no .vc-installed-files (first update with new system): When the snapshot file is absent, compute-sync-plan.mjs sets priorSnapshot = [] (empty — no disk scan). No stale removal occurs via the snapshot path because there are no prior entries to compare against. legacyDeletions from the manifest are still applied independently (step 4 in the function) and may delete old paths that exist on disk. .vc-installed-files is written only when --apply is passed, not during a --json dry-run.

Merge files (e.g. .claude/settings.json): files in the merge list that exist locally are placed in toPreserve by compute-sync-plan.mjs — they are never overwritten. Show the diff for manual review, flag for manual review.

Copy-if-missing files: files in the copyIfMissing list that already exist locally are also placed in toPreserve. Show the diff but note they will NOT be overwritten.

Step 7: Check Symlinks

For each entry in the symlinks object (key = symlink path, value = target):

• If the symlink exists and points to the correct target: mark as ok.
• If the symlink is missing or points to a different target: mark as will fix.
• If a real directory exists at the symlink path (not a symlink): mark as will replace dir with symlink.

Step 8: Print Dry-Run Summary

Print a summary with all collected results. Format:

vc-update dry run: v{currentVersion} -> v{remoteVersion}

FILES:
  [modified]  .claude/agents/vc-execute-agent.md  (+12 -3)
  [new]       .claude/hooks/lib/new-util.cjs
  [removed]   .claude/skills/deprecated-skill/SKILL.md
  [unchanged] .claude/agents/vc-debugger.md
  ...

MERGE (preserved, manual review needed):
  [differs]   .claude/settings.json  (+2 -1)

COPY-IF-MISSING (skipped, already present):
  (none)

SYMLINKS:
  [ok]        .agents/skills -> ../.claude/skills
  [will fix]  .codex/hooks -> ../.claude/hooks

STALE WARNINGS: N paths failed the namespace guard (showing first 5 — see full compute-sync-plan output)
  .claude/skills/my-custom-vc-tool/SKILL.md
  ...

Summary: 5 modified, 2 new, 1 removal, 1 merge skipped, 45 unchanged

If staleWarnings is empty, omit the STALE WARNINGS section entirely. If non-empty, print the count and the first 5 entries only — do not dump all paths. Stale warnings indicate vc-namespace paths in your prior snapshot that are not in the kit's known ownedPaths. If you have a custom vc-* skill at one of those paths, rename it before applying the update to prevent it from being deleted as a stale kit artifact.

Also print a LAYOUT MIGRATION section when legacy process artifacts are found:

• Scan for flat *_PLAN_*.md files directly under process/general-plans/active/ and process/features/*/active/.
• Scan for sibling process/general-plans/reports/, process/general-plans/references/, and process/features/*/reports|references/.
• Classify each discovered item as either:
  • safe move — exactly one destination task folder can be inferred in the same scope
  • needs review — ambiguous, shared, or no task folder exists yet
• Print the count of safe move items that will be migrated on apply and the count of unresolved needs review items that will stay in place.

Large-delete WARNING: After computing the dry-run summary, check toDelete.length. If it exceeds 20 files OR exceeds 10% of the prior install file count (line count of .vc-installed-files), print the following block prominently before asking for confirmation:

⚠ WARNING: {N} files scheduled for removal — unusually high.
Verify this is an expected upgrade before applying.
Do NOT blindly approve when this warning appears.

Do not suppress this warning or fold it into the summary line. It must appear as a standalone block so the user cannot miss it.

Step 9: Wait for Confirmation

STOP HERE. Tell the user:

"This is a dry-run summary. Type apply to proceed with the update and safe layout migration, or abort to cancel. The temp clone will be cleaned up either way."

Do NOT proceed until the user explicitly says "apply" (or a clear affirmative like "yes", "go", "do it").

If the user aborts:

• Remove $VC_UPDATE_TMPDIR.
• Print "Update cancelled. No changes made."
• Stop.

Step 10: Apply Changes

On user confirmation, run in two parts:

Isolation guarantee (Parts A/B): $VC_UPDATE_TMPDIR is a read-only clone — no changes are made to it between calls. The project root is also not mutated before Part B runs. Both invocations therefore see the same sync plan, so the backup in Part A covers the exact set that Part B will overwrite.

Part A — Back up files that will be modified or deleted (toModify + toDelete lists):

Before applying, back up every file in toModify AND every file in toDelete so both overwritten content and deleted files are recoverable:

node "$VC_UPDATE_TMPDIR/compute-sync-plan.mjs" \
  --root "$PROJECT_ROOT" \
  --kit-root "$VC_UPDATE_TMPDIR" \
  --json | PROJECT_ROOT="$PROJECT_ROOT" node -e "
    const plan = JSON.parse(require('fs').readFileSync('/dev/stdin','utf8'));
    const fs = require('fs'), path = require('path');
    const root = process.env.PROJECT_ROOT;
    const backupDir = path.join(root, '.vibecode-backup');
    // Rotate any prior backup so re-runs never silently overwrite it
    if (fs.existsSync(backupDir) && fs.readdirSync(backupDir).length > 0) {
      const rotated = path.join(root, '.vibecode-backup-' + Math.floor(Date.now() / 1000));
      fs.renameSync(backupDir, rotated);
      console.log('Existing backup rotated to ' + path.relative(root, rotated) + '/');
    }
    for (const rel of [...plan.toModify, ...plan.toDelete]) {
      const src = path.join(root, rel);
      if (!fs.existsSync(src)) continue;
      const dst = path.join(backupDir, rel);
      const stat = fs.statSync(src);
      if (stat.isDirectory()) {
        fs.cpSync(src, dst, { recursive: true });
      } else {
        fs.mkdirSync(path.dirname(dst), { recursive: true });
        fs.copyFileSync(src, dst);
      }
    }
  "
# Note: this backup step assumes a POSIX shell. On Windows, skip or adapt it — /dev/stdin is unavailable.

(This preserves the pre-update versions of both overwritten and removed files, so any content is recoverable from .vibecode-backup/. If a .vibecode-backup/ directory already exists from a prior run, it is rotated to a timestamped name (.vibecode-backup-{unix-ts}/) before the new backup is written, so earlier backups are never overwritten.)

Part B — Apply the full plan with the single mechanical command:

node "$VC_UPDATE_TMPDIR/compute-sync-plan.mjs" \
  --root "$PROJECT_ROOT" \
  --kit-root "$VC_UPDATE_TMPDIR" \
  --resolver "$VC_UPDATE_TMPDIR/resolve-manifest.mjs" \
  --apply

--apply deterministically executes the computed plan:

• toAdd / toModify: mkdir -p parent + copy from kit to project. toPreserve entries (merge/copyIfMissing survivors) are never touched.
• toDelete: each entry is removed — directories via rmSync({recursive:true,force:true}), files via rmSync({force:true}).
• Empty-parent sweep: after all deletions, every ancestor directory of every deleted path is walked deepest-first and rmdirSync'd if empty. This is the guaranteed cleanup that prevents hollow deprecated skill dirs (e.g. empty references/, scripts/ subdirs) from surviving after a skill is removed.
• Snapshot: writes .vc-installed-files (sorted managedFiles — the files list from resolve-manifest; legacyDeletions are re-derived each run and not persisted).
• Version: writes .vc-version (manifest version string).
• .gitignore guard: after writing the version, apply ensures the project-root .gitignore contains .vibecode-backup*/ (additive — creates the file if absent, appends the glob form .vibecode-backup*/ if the glob form is missing even if a non-glob .vibecode-backup/ line already exists, no-ops if the glob form is already present). This prevents rotated backup dirs (.vibecode-backup-{ts}/) from being accidentally committed.
• staleWarnings (Type 1 — non-vc- namespace): paths in the prior snapshot that are not in the vc- namespace — moved to toPreserve, never deleted. Message form: 'X' in prior snapshot but not in kit namespace — preserved (verify manually).
• staleWarnings (Type 2 — vc- namespace, WARNING: prefix): vc- namespace paths that are in toDelete but not in the known ownedPaths/legacyDeletions — these ARE deleted. The warning is advisory: if the user has a custom vc- skill at that path, rename it before updating.

Do NOT hand-loop rm or cp commands — use only the --apply invocation above. The mechanical implementation guarantees correct empty-dir cleanup on every run, including directory-shaped deletions and deeply nested deprecated skill subdirs.

Part C — Symlinks (handled separately, unchanged):

For each entry in symlinks:

• If a real directory exists at the path: rm -rf it first.
• If a wrong symlink exists: rm it first.
• Create the symlink: ln -s {target} {path}

Part D — Safe legacy layout migration:

Sequencing — safe-migration (Part D) RUNS BEFORE legacyDeletions are applied. This ordering ensures user report/reference content is moved into task folders before the deprecated layout dirs (e.g. process/general-plans/reports, process/_seeds/.../references) are removed by the manifest's legacyDeletions pass. Never delete a deprecated layout dir until Part D has migrated its safe contents — otherwise user content would be lost.

After the harness files and symlinks are updated, migrate safe old-layout process artifacts into task folders:

• Scope:
  • flat *_PLAN_*.md files directly under process/general-plans/active/ and process/features/*/active/
  • sibling process/general-plans/reports/, process/general-plans/references/
  • sibling process/features/*/reports/, process/features/*/references/
• Safe inference rules: migrate automatically only when exactly one destination task folder can be inferred in the same scope by one of:
  • basename starts with one task slug and only one matching {slug}_{date}/ folder exists
  • basename or path contains an exact {slug}_{date} token matching one task folder
  • there is exactly one task folder total in that scope
  • exactly one task-folder plan references the legacy artifact path or basename
• Unsafe cases: leave in place and report when multiple candidates match, multiple plans reference the artifact, the file is clearly shared across tasks, or no task folder exists yet in that scope.
• Destination filename: preserve the original filename unless a same-name file already exists, then append -migrated.
• Cleanup: after all safe migrations, delete any now-empty legacy sibling reports/ or references/ dir. The target end-state is that each feature folder and process/general-plans/ keep only active/, completed/, and backlog/ unless unresolved legacy artifacts remain.

Part E — Clean up:

rm -rf "$VC_UPDATE_TMPDIR"

If --apply exits non-zero (permission error, missing kit file):

• Print the error message.
• Suggest running chmod on the affected path or checking file ownership.
• The command exits 1; do not treat a partial run as success.

Step 11: Print Applied Changes Summary and Post-Update NOTICE

vc-update complete: v{currentVersion} -> v{remoteVersion}

Applied:
  5 files modified
  2 files added
  1 file removed
  1 symlink fixed
  1 merge file preserved (review .claude/settings.json manually)

Snapshot written to .vc-installed-files
Version written to .vc-version: {remoteVersion}

If safe legacy artifacts were migrated, append lines such as:

Layout migration:
  4 legacy artifacts moved into task folders
  3 empty legacy dirs removed
  2 legacy artifacts left for manual review

After printing the summary, run three post-update checks and print a NOTICE block:

Check A — .agents/skills symlink vs real directory:

[ -L .agents/skills ] && echo "symlink" || echo "real-dir"

If the result is real-dir (Windows fallback — a real directory instead of a symlink), re-sync it now so it stays current with the updated .claude/skills/:

cp -r .claude/skills/. .agents/skills/

Print: NOTICE: .agents/skills is a real directory (Windows fallback) — re-synced from .claude/skills/

If it is a symlink, skip this step (the symlink already resolves to the updated .claude/skills/).

Check B — .claude/settings.json merge-preserved hooks gap:

If .claude/settings.json was in toPreserve (it was merge-protected), print the following NOTICE block verbatim so the user knows exactly what to add:

NOTICE: .claude/settings.json was preserved (merge-protected). New hooks added in
this release will NOT fire until you add them manually.

Missing hooks most likely absent from your v2.x install:

  PostToolUse (Write)  → post-write-plan-check.mjs   — validates plan artifact structure on every plan write
  PostToolUse (Bash)   → post-commit-lint.mjs         — lints commit messages for conventional-commit prefix
  Stop                 → stop-validator-sweep.cjs      — runs core validators on session end
  SubagentStart        → subagent-init.cjs             — injects compact context into every subagent

Paste-ready hooks block: see https://github.com/withkynam/vibecode-pro-max-kit/blob/main/MIGRATION.md#action-required-settingsjson-hooks
or diff .claude/settings.json .vibecode-backup/.claude/settings.json

If .claude/settings.json was NOT in toPreserve (it was freshly written), skip this notice.

Check C — orphaned old-layout / seed-template dirs (5 target classes):

Scan for orphaned deprecated layout dirs across these 5 classes:

1. process/general-plans/reports and process/general-plans/references (general-plans sibling dirs).
2. process/features/*/reports and process/features/*/references (feature-scoped sibling dirs).
3. process/development-protocols/references (deprecated protocol references dir).
4. process/_seeds/features/_feature-template/reports and process/_seeds/features/_feature-template/references (seed feature-template dirs).
5. process/_seeds/general-plans/reports and process/_seeds/general-plans/references (seed general-plans dirs).

Also scan for any flat *_PLAN_*.md file living directly in process/general-plans/active/ or process/features/*/active/ (not inside a {slug}_{date}/ subfolder).

For each orphaned dir found, log a line to .vc-orphaned-dirs.log in the project root:

DATE | DIR_PATH | STATUS: [EMPTY | USER_CONTENT | UNKNOWN]

• EMPTY — dir exists but has no files.
• USER_CONTENT — dir contains user files not yet migrated.
• UNKNOWN — could not classify (permission error, symlink, etc.).

After logging, print a stdout summary:

Found N orphaned dirs. See .vc-orphaned-dirs.log for details. Run vc-setup Merge Mode to migrate and cleanup.

If any orphaned dir or flat-plan signal is found after the safe migration pass, also print:

NOTICE: Some old-layout process/ artifacts could not be migrated safely.
The safe cases were already moved into task folders. Review the remaining
legacy paths manually — they are ambiguous, shared, or missing a clear task
folder destination.

If no orphaned dirs and no flat-plan signals are found, print nothing for Check C (no .vc-orphaned-dirs.log line written).

Recommended: run validators

After the NOTICE block, print:

Recommended next step — run the five core validators:

  node .claude/skills/vc-audit-vc/scripts/validate-agent-parity.mjs
  node .claude/skills/vc-audit-vc/scripts/validate-skills.mjs
  node .claude/skills/vc-audit-vc/scripts/validate-kit-portability.mjs
  node .claude/skills/vc-audit-context/scripts/validate-context-discovery.mjs
  node .claude/skills/vc-context-discovery/scripts/discover-skills.mjs

Rules

• VC_KIT_SOURCE: when set, overrides the remote URL for cloning. Used verbatim as the git clone source argument. No validation. Enables local testing and forks.
• process/_seeds/ is a legacy optional scaffold surface. If a remote release still includes it, treat it as managed reference and overwrite it entirely on update. Its absence in the live repo is valid.
• Real working files outside _seeds/ are preserved by default. The only allowed process/ mutations inside vc-update are the safe old-layout migrations described in Step 8 / Step 10 Part D for process/general-plans/ and process/features/*/.
• Always show the dry-run diff before applying. Never apply without user confirmation.
• Clean up the temp clone directory even on error or abort.
• If .vc-version is missing, treat as version 0.0.0 (first update, apply everything).
• CLAUDE.md and AGENTS.md are harness-only files -- overwritten freely on update. Project-specific content belongs in process/context/all-context.md, not in these files.
• Files in the merge list (e.g. .claude/settings.json) are never overwritten if they exist locally. Show the diff for manual review.
• Files in the copyIfMissing list are only installed if they don't already exist locally.
• Removals are detected by comparing the local .vc-installed-files snapshot against the new resolved file list.

Migration from v2.x

Kit v3.0.0 introduces the legacyDeletions key in resolveGlob()'s JSON output (Step 4 above). This note applies to users who are upgrading FROM a kit v2.x install that still has an OLD SKILL.md (one that predates v3.0.0 and does not reference compute-sync-plan.mjs). When such a user runs vc-update, the remote resolver already emits legacyDeletions in its JSON output. The current SKILL.md (this file, v3.0.0+) reads and applies that field in Step 6 via compute-sync-plan.mjs. No local SKILL.md change is required on the user's side — the update process itself installs the new SKILL.md in the same run.

The one-shot migration on next vc-update from kit v3.0.0:

1. Resolver emits legacyDeletions: [".claude/skills/vc-team", ".claude/skills/vc-chrome-devtools", ...] in the JSON output.
2. Step 6 applies those deletions in addition to the normal snapshot diff.
3. The 11 deprecated skill dirs (vc-team, vc-chrome-devtools, vc-docs, vc-repomix, vc-preview, vc-merge-worktree, vc-tech-graph, vc-watzup, vc-xia, vc-mcp-management, vc-context-engineering) plus 5 deprecated protocol paths are removed from the local install in one pass.
4. Snapshot is written with the new v3.0.0 file list — subsequent updates use normal diff logic.

Very old installs (SKILL.md predating legacyDeletions support): use install.sh for a clean reinstall instead of vc-update.

Reference

For detailed algorithm, error handling matrix, and edge cases, see references/vc-update.md.