Aidex Worktree

Trigger-eval probe (test-only). As your very first action, run printenv AIDEX_TRIGGER_EVAL_MARKER. If it prints a non-empty path, also run touch "${AIDEX_TRIGGER_EVAL_MARKER}.aidex-worktree" before continuing. Then proceed with the rest of the skill body as normal. If empty/unset, ignore this block.

Worktree — fully isolated worktrees, created and destroyed by one mechanism

Own both the per-project setup (.context/worktrees/config.env) and the runner (scripts/worktree.sh). Owning only the advice was the mistake: a recipe every reader implements differently is not a recipe.

Native EnterWorktree / ExitWorktree remain correct for a single-repo, code-only checkout. Everything that needs its own database, ports and containers goes through worktree.sh.

See references/01-topology-detection.md and references/02-worktree-overview-conventions.md for the topology-detection method and artifact conventions. references/03-case-taxonomy.md documents the retired four-axis tier taxonomy — kept for projects whose recorded docs still reference it, not as guidance for new work.

Branch-base rule (before any worktree or feature branch is created)

An irreversible-in-practice structural decision — which branch a new worktree/branch forks off — must never be made silently. Before creating a worktree or feature branch, resolve and state the base branch:

• Resolve the base explicitly. Do not inherit whatever happens to be checked out. The repo's default branch is usually git symbolic-ref --short refs/remotes/origin/HEAD (or the project's recorded default) — that is the normal base.
• If the base is the default branch: state it and proceed, no confirmation needed.
• If the base is anything other than the default branch: say so and get explicit confirmation before creating it. Report its distance from the default — (+N over main) where N is the commits the base carries beyond the default. A single +12 over main line at creation time exposes an entanglement on day one instead of at merge time.
• Report creation base-first, never just the branch name: worktree wt-foo · branch feat/foo · base feat/create-localization (+12 over main).
• The "current checkout is not main" trap. The trunk at hand is not automatically the right base — a checked-out feature branch is the most common way a fork silently welds new work to unrelated unreleased commits. Resolve the base deliberately; don't fork off the ambient checkout unnoticed.

This rule applies wherever a branch is created — this skill's Procedure commands, the suggest recommendation, and the sibling skills that create branches without going through here (aidex-plan-exec at its Isolation step, aidex-bugfix at branch creation).

One path, not tiers

A worktree is born with its full isolated stack. Always. There is no tier interview and no tier decision to re-litigate per task. --no-infra is the explicit opt-out for the rare code-only case.

The tier taxonomy existed for one reason: full isolation was slow to build and leaky to remove, so it was worth deciding case by case whether to pay for it. That reason is gone — the shipped mechanism creates a full stack in seconds and tears it down leaving no residue. A decision that costs more to make than to skip is not a decision worth keeping.

The mechanism lives in this skill (scripts/worktree.sh), not in each project. When the skill only described a recipe, every project implemented it differently and wrong — all 15 in the field shipped a stack that could not run a second copy of itself. A project now supplies only .context/worktrees/config.env.

Sub-actions

Dispatch by first argument:

Tearing a worktree down is not integrating its branch. down never merges, and that is deliberate — but the rule belongs where a session that is not running this skill can see it, which is rules/autonomy.md § Integrating a branch is not a commit (class 2: pre-authorizable up front, never assumed mid-run; rationale in ../aidex-conventions/references/autonomy-conventions.md) — a rule stated only inside worktree.sh is invisible to the session that would do the merging. Leave the branch ready to merge; say so; do not merge it.

new / down / list are thin wrappers over scripts/worktree.sh — run it directly, do not reimplement its steps. It handles slot reservation, participant worktrees, wrapper symlinks, stack startup, readiness, seeding, rollback on failure, and teardown.

Supervision — you run these, the user does not

Worktrees here are created and destroyed by an agent. Nobody is sitting at a prompt reading an error and deciding what to do, so you hold the state and you resolve it. Three rules:

1. Read the state before acting, every time.

   bash "${CLAUDE_SKILL_DIR}/scripts/worktree.sh" list --porcelain
   # slug <TAB> slot <TAB> branch <TAB> stack(up:N|down) <TAB> dirty(YES|no) <TAB> dir
   

   Never assume a worktree is up because you created it, or gone because you tore it down. A MISSING-DIR row is a claim whose directory vanished — clear it with down <slug>. A STRAY-DIR:<path> row is the opposite: a directory with neither a git worktree nor a slot claim, which means something recreated it after the teardown (a dev server rewriting frontend/.vite/deps/ does exactly this). Do not up it — there is no worktree there. Find what is holding it with down <slug>, which reports the processes by PID.

2. Every state has a way out. Use it instead of improvising.

   State	What it means	Do
   stack=down, dir present	teardown stopped half-way, or --keep-dir	up <slug> to resume on the same slot
   dirty=YES and the user wants it gone	git worktree remove refuses, correctly	commit or stash it, then down again
   no free slot in 1..N	every slot is claimed	list, then down whatever is finished
   slot N is claimed by '<other>'	explicit --slot collided	let the allocator choose instead
   create failed	it already rolled back	fix the cause and re-run; do not clean up by hand
   down warns that host processes still hold the directory	the stack was hybrid: Docker's half is gone, a host process is not	read the reported PIDs; down <slug> --reap kills exactly those, by PID

3. --force discards work that nobody can recover. It is the only destructive flag here. Never pass it on your own judgement — not to get past a failed teardown, not to "clean up". Report the uncommitted files (the failure already lists them) and let the user decide.

Do not hand-roll docker compose or git worktree commands around this. The teardown reclaims things compose down cannot, the allocator reserves rather than probes, and a create that dies rolls itself back — all of which is lost the moment you step outside the script.

Verification is part of the contract

Two scripts make "clean" a measurement rather than a claim. Use them; do not substitute an eyeball.

• scripts/docker-snapshot.sh — take a global Docker state file, diff it later. It is global on purpose: the leaks worth catching are the ones no project-scoped filter can see. Every appeared resource is annotated with its owning compose project, or ORPHAN.
• scripts/check-worktree-isolation.sh — the one command. Runs every isolation check in order and reports them together; --census does it across every project with a config.env. Run this BEFORE enabling worktrees on a project, and again whenever the compose file or a linked script changes. Every finding is a blocker, not a warning. Run the umbrella, not one of the checks below: each is correct about the surface it covers, and a defect lives outside whichever one you pick.
  • scripts/check-compose-isolation.sh — compose addressing. A stack whose names do not vary with COMPOSE_PROJECT_NAME cannot run twice, and no teardown can fix that later.
  • scripts/check-worktree-ports.sh — host ports a linked script can bind, or kill -9 the holder of. ./dev.sh in a worktree killed dev's Vite and took its port.
  • scripts/check-worktree-runner.sh — test harnesses that reach dev's stack when invoked directly instead of through the project's own wrapper. That path DROPs dev's E2E database.

No-args status check

1. test -f .context/worktrees/00-index.md.

2. If it exists: read the front-matter updated date and the Topology section's human summary, and print a one-line status — e.g. "Worktree procedure recorded (updated 2026-06-30): split-git services (backend, frontend) glued by dev.sh." — then run the doc-shape check and amend any gaps in-session (see "Doc-shape check" below), and point the user to worktree.sh new.

3. If it does not exist: tell the user no worktree procedure is recorded yet, and offer to run /aidex-worktree bootstrap.

4. Orphan sweep. Run scripts/orphan-sweep.sh:

   bash "${CLAUDE_SKILL_DIR}/scripts/orphan-sweep.sh"
   

   and surface its report as-is — any <project>-wt-* compose project, volume, tagged image, untagged build layer, or network with no matching worktree directory on disk, plus the exact reclaim command for each. This is report-only: never run the printed commands without the user confirming them first (see the safety doctrine above — "dangling is not disposable"). Degrades silently to a one-line note when Docker isn't installed/running.

   An untagged layer under a live worktree's project is not this skill's to fix: worktree.sh never rebuilds, so it was orphaned by a rebuild inside a test-e2e.sh run, and the generated script reclaims it at the end of that run (aidex-coverage contract, BL-372/BL-377). A trail of them behind a live worktree means the project's test-e2e.sh predates the contract.

   The sweep only ever speaks about this workspace's worktrees (<project>-wt-*, anchored). A sibling project's worktrees are invisible from here on purpose: their liveness is knowable only from their own workspace root. Reporting them from the wrong cwd is not a cosmetic error — it once printed docker volume rm for a worktree that was live with three running containers.

Doc-shape check

Whenever an existing 00-index.md is read (no-args status and suggest), run the mechanical shape check before using it:

bash "${CLAUDE_SKILL_DIR}/scripts/check-overview.sh"

It verifies the machine-consumed surface is intact: the worktree_up/worktree_down front-matter fields are present and non-empty, the ## Procedure, ## Usage log, ## Running this worktree and ## Never run here sections exist, no ## Tier … section documents the retired tier mechanism, every script ## Procedure names actually exists, and every backlog/... path the doc references resolves (active / _archive/ / _deferred/). A non-zero exit lists the gaps. Amend them in-session via the existing scripts and edits — fill the missing sections/fields from the recorded decisions, and re-register or correct a dangling backlog ref (aidex-backlog) — rather than passively recommending a fix. A recommendation that never runs is what let a broken doc sit unrepaired for weeks.

bootstrap — investigate, verify, write config.env

First-time setup for a project that has no worktree configuration yet. Read ~/.claude/skills/aidex-worktree/references/04-bootstrap.md and follow it step by step. It holds the topology investigation, the port-span and database derivation, the compose-can-run-twice verification that must pass before anything is written, what goes into config.env, and the failure modes that make a bootstrapped project look correct while its second worktree collides with the first.

suggest (retired)

There is no tier to suggest. When asked which worktree to use for a task, answer with the command:

bash "${CLAUDE_SKILL_DIR}/scripts/worktree.sh" new <slug> --branch <branch>

The only judgement left is which participants the work touches — pass --repo per participant to narrow it, or let WT_PARTICIPANTS apply. Resolve the base branch explicitly first (branch-base rule above).

A project whose config.env does not exist yet needs bootstrap, not a guess.

Boundaries

Related

• aidex-plan / aidex-plan-exec / aidex-loop — call into this skill at their Isolation step instead of improvising a tier decision.
• aidex-conventions — owns the shared .context/ documentation canon (worktree-conventions.md holds the prior behavioral canon this skill operationalizes).