bg-szy
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- ▌ Bio Genome Intervals Bigwig Tracks · bg-szy bundleCreate and read bigWig browser tracks for visualizing continuous genomic data. Convert bedGraph to bigWig, extract signal values, and generate coverage tracks using UCSC tools and pyBigWig. Use when preparing coverage tracks for genome browsers or extracting signal at specific regions.
- ▌ Bio Machine Learning Atlas Mapping · bg-szy bundleMaps query single-cell data to reference atlases using scArches transfer learning with scVI and scANVI models. Transfers cell type labels without retraining on combined data. Use when annotating new single-cell datasets using pre-trained reference models.
- ▌ Bio Reporting Automated Qc Reports · bg-szy bundleGenerates standardized quality control reports by aggregating metrics from FastQC, alignment, and other tools using MultiQC. Use when summarizing QC metrics across samples, creating shareable quality reports, or building automated QC pipelines.
- ▌ Bio Data Visualization Specialized Omics Plots 2 · bg-szy bundleReusable plotting functions for common omics visualizations. Custom ggplot2/matplotlib implementations of volcano, MA, PCA, enrichment dotplots, boxplots, and survival curves. Use when creating volcano, MA, or enrichment plots.
- ▌ Bio Vcf Statistics · bg-szy bundleGenerate variant statistics, sample concordance, and quality metrics using bcftools stats and gtcheck. Use when evaluating variant quality, comparing samples, or summarizing VCF contents.
- ▌ Bio Clip Seq Binding Site Annotation · bg-szy bundleAnnotate CLIP-seq binding sites to genomic features including 3'UTR, 5'UTR, CDS, introns, and ncRNAs. Use when characterizing where an RBP binds in transcripts.
- ▌ Bio Experimental Design Batch Design · bg-szy bundleDesigns experiments to minimize and account for batch effects using balanced layouts and blocking strategies. Use when planning multi-batch experiments, assigning samples to sequencing lanes, or designing studies where technical variation could confound biological signals.
- ▌ Bio Genome Intervals Bed File Basics · bg-szy bundleBED file format fundamentals, creation, validation, and basic operations. Covers BED3 through BED12 formats, coordinate systems, sorting, and format conversion using bedtools and pybedtools. Use when working with genomic coordinates or preparing interval files for downstream tools.
- ▌ Bio Variant Calling · bg-szy bundleCall SNPs and indels from aligned reads using bcftools mpileup and call. Use when detecting variants from BAM files or generating VCF from alignments.
- ▌ Bio Vcf Manipulation · bg-szy bundleMerge, concatenate, sort, intersect, and subset VCF files using bcftools. Use when combining variant files, comparing call sets, or restructuring VCF data.
- ▌ Frontend Review · bg-szyReview frontend code for accessibility, risky UI security issues, missing loading and error states, and pre-merge regressions. Use when asked to review React, UI, forms, frontend components, or merge-readiness for the frontend.
- ▌ Bio Genome Assembly Assembly Polishing · bg-szy bundlePolish genome assemblies to reduce errors using short reads (Pilon), long reads (Racon), or ONT-specific tools (medaka). Essential for improving long-read assembly accuracy. Use when improving assembly accuracy with polishing tools.
- ▌ Bio Variant Annotation · bg-szy bundleComprehensive variant annotation using bcftools annotate/csq, VEP, SnpEff, and ANNOVAR. Add database annotations, predict functional consequences, and assess clinical significance. Use when annotating variants with functional and clinical information.
- ▌ Frontend Review 2 · bg-szyReview frontend code for accessibility, risky UI security issues, missing states, and common UX regressions. Use when asked to review React, UI, frontend components, forms, a11y, or pre-merge frontend quality.
- ▌ Bio Consensus Sequences · bg-szy bundleGenerate consensus FASTA sequences by applying VCF variants to a reference using bcftools consensus. Use when creating sample-specific reference sequences or reconstructing haplotypes.
- ▌ Bio Variant Calling Deepvariant · bg-szy bundleDeep learning-based variant calling with Google DeepVariant. Provides high accuracy for germline SNPs and indels from Illumina, PacBio, and ONT data. Use when calling variants with DeepVariant deep learning caller.
- ▌ Bio Gatk Variant Calling · bg-szy bundleVariant calling with GATK HaplotypeCaller following best practices. Covers germline SNP/indel calling, GVCF workflow for cohorts, joint genotyping, and variant quality score recalibration (VQSR). Use when calling variants with GATK HaplotypeCaller.
- ▌ Bio Variant Calling Joint Calling · bg-szy bundleJoint genotype calling across multiple samples using GATK CombineGVCFs and GenotypeGVCFs. Essential for cohort studies, population genetics, and leveraging VQSR. Use when performing joint genotyping across multiple samples.
- ▌ Review Pr · bg-szyReviews the current branch's changes against its base branch as a pull request: correctness of new and modified code, test coverage for it, and documentation accuracy. Use when asked to review a branch, a diff, or a pull request.
- ▌ A11Y · bg-szyAccessibility audit for frontend changes — WCAG 2.2 AA, screen-reader compatibility, keyboard navigation, focus management, ARIA correctness, color contrast, and reduced-motion. Static diff-scoped analysis (safe to auto-run) plus an optional dynamic axe pass against a running app. Use when asked to "check accessibility", "a11y audit", "screen reader check", "WCAG", "is this accessible", "keyboard navigation", "ARIA review", or after heavy frontend work.
- ▌ Fuzz · bg-szyLightweight web fuzzing via ffuf — directory discovery, parameter testing, subdomain enumeration.
- ▌ Uv · bg-szyChecks whether the uv Python package manager is installed and installs it if missing. Ensures uv is on PATH. Use when another skill requires uv as a prerequisite.
- ▌ Codex · bg-szyOpenAI Codex CLI wrapper — three modes. Code review: independent diff review via codex review with pass/fail gate. Challenge: adversarial mode that tries to break your code. Consult: ask codex anything with session continuity for follow-ups. The "200 IQ autistic developer" second opinion. Use when asked to "codex review", "codex challenge", "ask codex", "second opinion", or "consult codex". (gstack) Voice triggers (speech-to-text aliases): "code x", "code ex", "get another opinion".
- ▌ Debug · bg-szy bundleUse when encountering any bug, test failure, or unexpected behavior, before proposing fixes
- ▌ Learn · bg-szyManage project learnings. Review, search, prune, and export what gstack has learned across sessions. Use when asked to "what have we learned", "show learnings", "prune stale learnings", or "export learnings". Proactively suggest when the user asks about past patterns or wonders "didn't we fix this before?"
- ▌ Retro · bg-szyWeekly engineering retrospective. Analyzes commit history, work patterns, and code quality metrics with persistent history and trend tracking. Team-aware: breaks down per-person contributions with praise and growth areas. Use when asked to "weekly retro", "what did we ship", or "engineering retrospective". Proactively suggest at the end of a work week or sprint. (gstack)
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- ▌ Git Cleanup · bg-szySafely analyzes and cleans up local git branches and worktrees by categorizing them as merged, squash-merged, superseded, or active work.
- ▌ Sharp Edges · bg-szyIdentifies error-prone APIs, dangerous configurations, and footgun designs that enable security mistakes. Use when reviewing API designs, configuration schemas, cryptographic library ergonomics, or evaluating whether code follows 'secure by default' and 'pit of success' principles. Triggers: footgun, misuse-resistant, secure defaults, API usability, dangerous configuration.
- ▌ Browse · bg-szyFast headless browser for QA testing and site dogfooding. Navigate any URL, interact with elements, verify page state, diff before/after actions, take annotated screenshots, check responsive layouts, test forms and uploads, handle dialogs, and assert element states. ~100ms per command. Use when you need to test a feature, verify a deployment, dogfood a user flow, or file a bug with evidence. Use when asked to "open in browser", "test the site", "take a screenshot", or "dogfood this". (gstack)
- ▌ Canary · bg-szyPost-deploy canary monitoring. Watches the live app for console errors, performance regressions, and page failures using the browse daemon. Takes periodic screenshots, compares against pre-deploy baselines, and alerts on anomalies. Use when: "monitor deploy", "canary", "post-deploy check", "watch production", "verify deploy". (gstack)
- ▌ Github · bg-szyWhen the user wants to use GitHub for SEO, parasite SEO, GEO, open source marketing, README optimization, or curated Awesome lists. Also use when the user mentions "GitHub," "GitHub SEO," "GitHub parasite SEO," "GitHub GEO," "awesome list," "GitHub README," "profile README," "pinned repositories," "Trending," "Explore," "repository name," "About section," "GitHub description," "GitHub topics," "Website field," "GitHub Pages," "github.io," "user site," "project site," "GitHub gist," "curated list," or "navigation list." Not for Medium or other non-GitHub platforms—use parasite-seo or medium-posts. For OSS business model, use open-source-strategy.
- ▌ Gstack · bg-szy bundleFast headless browser for QA testing and site dogfooding. Navigate pages, interact with elements, verify state, diff before/after, take annotated screenshots, test responsive layouts, forms, uploads, dialogs, and capture bug evidence. Use when asked to open or test a site, verify a deployment, dogfood a user flow, or file a bug with screenshots. (gstack)
- ▌ Health · bg-szyCode quality dashboard. Wraps existing project tools (type checker, linter, test runner, dead code detector, shell linter), computes a weighted composite 0-10 score, and tracks trends over time. Use when: "health check", "code quality", "how healthy is the codebase", "run all checks", "quality score". (gstack)
- ▌ Review · bg-szyPre-landing PR review. Analyzes diff against the base branch for SQL safety, LLM trust boundary violations, conditional side effects, and other structural issues. Use when asked to "review this PR", "code review", "pre-landing review", or "check my diff". Proactively suggest when the user is about to merge or land code changes. (gstack)
- ▌ Verify · bg-szyUse when about to claim work is complete, fixed, or passing, before committing or creating PRs - requires running verification commands and confirming output before making any success claims; evidence before assertions always
- ▌ Bids · bg-szyUse this skill when working with Brain Imaging Data Structure (BIDS) datasets: organizing neuroscience and biomedical data (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), querying BIDS layouts, validating compliance, converting DICOM to BIDS, writing metadata sidecars, or creating BIDS derivatives.
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- ▌ Scout · bg-szyAnalyzes current conversation context to recommend the best skills and subagents for the task at hand. Use proactively when unsure which tool, skill, or agent to use.
- ▌ Analyze · bg-szyPerform a non-destructive cross-artifact consistency and quality analysis across spec.md, plan.md, and tasks.md after task generation.
- ▌ Article · bg-szyExtract clean article content from URLs (blog posts, articles, tutorials) and save as readable text. Use when user wants to download, extract, or save an article/blog post from a URL without ads, navigation, or clutter.
- ▌ Clarify · bg-szyIdentify underspecified areas in the current feature spec by asking up to 5 highly targeted clarification questions and encoding answers back into the spec.
- ▌ Defense · bg-szyDefense-in-depth security validation — multi-layered checks for OWASP Top 10, secrets, auth, crypto, and data protection.
- ▌ IOS Dev · bg-szyiOS and Swift development expert covering Swift best practices, SwiftUI patterns, Human Interface Guidelines compliance, accessibility audits, navigation patterns, and app architecture. Use when building iOS apps, reviewing Swift code, or planning app architecture.
- ▌ Pentest · bg-szySecurity scanning via clearwing — source code vulnerability hunting and network pentesting.
- ▌ QA Only · bg-szyReport-only QA testing. Systematically tests a web application and produces a structured report with health score, screenshots, and repro steps — but never fixes anything. Use when asked to "just report bugs", "qa report only", or "test but don't fix". For the full test-fix-verify loop, use /qa instead. Proactively suggest when the user wants a bug report without any code changes. (gstack) Voice triggers (speech-to-text aliases): "bug report", "just check for bugs".
- ▌ Specify · bg-szyCreate or update the feature specification from a natural language feature description.
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- ▌ Modal · bg-szyModal is a serverless cloud platform for running Python on demand, including on-demand GPUs. Use when deploying or serving AI/ML models, running GPU-accelerated workloads (training, fine-tuning, inference), serving web endpoints, scheduling batch jobs, or scaling Python code to cloud containers with the Modal SDK.
- ▌ Pymol · bg-szyVisualize, analyze, and render protein and molecular structures using PyMOL. Use when the user wants to create images of protein structures, perform structural alignments or superposition, measure distances or contacts, highlight binding sites or active site residues, color by B-factor/pLDDT, or analyze protein-ligand interactions. Do not use for docking, molecular dynamics, or sequence-only analysis.
- ▌ Qutip · bg-szySimulate and audit closed and open quantum-system models with QuTiP 5, including deterministic, trajectory, steady-state, spectral, and phase-space workflows. Use for local quantum-dynamics work where physical assumptions, dimensions, and numerical convergence must be explicit.
- ▌ Rdkit · bg-szyCheminformatics toolkit for fine-grained molecular control. SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure search, 2D/3D generation, similarity, reactions. For standard workflows with simpler interface, use datamol (wrapper around RDKit). Use rdkit for advanced control, custom sanitization, specialized algorithms.
- ▌ Setup · bg-szyFirst-time setup for protein design tools. Use this skill when: (1) User is new and hasn't run any tools yet, (2) Commands fail with "file not found" or "modal: command not found", (3) Modal authentication errors occur, (4) User asks how to get started or set up the environment, (5) biomodals directory is missing or tools aren't working.
- ▌ Sympy · bg-szyUse when you need exact symbolic math in Python — algebra, calculus, equation solving, symbolic linear algebra, or code generation via lambdify/LaTeX. Prefer NumPy or SciPy when floating-point approximations are sufficient.
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- ▌ Autoplan · bg-szyAuto-review pipeline — reads the full CEO, design, eng, and DX review skills from disk and runs them sequentially with auto-decisions using 6 decision principles. Surfaces taste decisions (close approaches, borderline scope, codex disagreements) at a final approval gate. One command, fully reviewed plan out. Use when asked to "auto review", "autoplan", "run all reviews", "review this plan automatically", or "make the decisions for me". Proactively suggest when the user has a plan file and wants to run the full review gauntlet without answering 15-30 intermediate questions. (gstack) Voice triggers (speech-to-text aliases): "auto plan", "automatic review".
- ▌ Graphify · bg-szyTurn any folder of code, docs, papers, or images into a queryable knowledge graph — interactive HTML, GraphRAG-ready JSON, and a plain-language audit report.
- ▌ Iac Scan · bg-szyInfrastructure-as-Code security scan for changed deploy config — Dockerfiles, docker-compose, Terraform, Kubernetes/Helm, and CI/CD workflows. Flags misconfigurations and exposed secrets (root containers, open ingress, wildcard IAM, privileged pods, untrusted CI triggers). Static diff-scoped analysis (safe to auto-run); uses tfsec/checkov/hadolint/actionlint when present. Use when asked to "scan infra", "IaC scan", "check the Dockerfile/terraform/k8s", "CI security", or after changing deploy/infra config.
- ▌ Indexing · bg-szyWhen the user wants to fix indexing issues from Search Console, use noindex, or implement Google Indexing API. Also use when the user mentions "fix indexing," "not indexed," "Crawled - currently not indexed," "discovered - currently not indexed," "index coverage," "noindex," "noindex tag," "pages not indexed," "why not indexed," "request indexing," or "Google Indexing API." For sitemap, use xml-sitemap.
- ▌ Make PDF · bg-szyTurn any markdown file into a publication-quality PDF. Proper 1in margins, intelligent page breaks, page numbers, cover pages, running headers, curly quotes and em dashes, clickable TOC, diagonal DRAFT watermark. Not a draft artifact — a finished artifact. Use when asked to "make a PDF", "export to PDF", "turn this markdown into a PDF", or "generate a document". (gstack) Voice triggers (speech-to-text aliases): "make this a pdf", "make it a pdf", "export to pdf", "turn this into a pdf", "turn this markdown into a pdf", "generate a pdf", "make a pdf from", "pdf this markdown".
- ▌ Tapestry · bg-szyUnified content extraction and action planning. Use when user says "learn-this <URL>", "learn this <URL>", "weave <URL>", "help me plan <URL>", "extract and plan <URL>", "make this actionable <URL>", or similar phrases indicating they want to extract content and create an action plan. Automatically detects content type (YouTube video, article, PDF) and processes accordingly.
- ▌ Web Perf · bg-szyAnalyzes web performance using Chrome DevTools MCP. Measures Core Web Vitals (LCP, INP, CLS) and supplementary metrics (FCP, TBT, Speed Index), identifies render-blocking resources, network dependency chains, layout shifts, caching issues, and accessibility gaps. Use when asked to audit, profile, debug, or optimize page load performance, Lighthouse scores, or site speed. Biases towards retrieval from current documentation over pre-trained knowledge.
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- ▌ Autopilot · bg-szy bundleUse when the user dictates an app, site, bot, or feature to build end-to-end and expects a finished result without reviewing specs, tickets, or code — vibecoding sessions, non-technical users, "собери под ключ", "build it for me", "не задавай лишних вопросов" requests. Also use when the user invokes /autopilot, or asks for a build in a named mode, depth or finish — «полный автомат», «режим интервью», «погриль меня», «ручной режим», «строго по брифу», «проработай глубоко», «вылижи до эталона».
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- ▌ Infsh CLI · bg-szy bundleRun AI apps via inference.sh CLI - image generation, video creation, LLMs, search, 3D, Twitter automation. Models: FLUX, Veo, Gemini, Grok, Claude, Seedance, OmniHuman, Tavily, Exa, OpenRouter, and many more. Use when running AI apps, generating images/videos, calling LLMs, web search, or automating Twitter. Triggers: inference.sh, infsh, ai model, run ai, serverless ai, ai api, flux, veo, claude api, image generation, video generation, openrouter, tavily, exa search, twitter api, grok
- ▌ Okx Guide · bg-szyOnchain OS onboarding & guide hub — the single entry for first-time, 'what is this / how do I use it', OKX.AI, and customer-support intents; classifies the intent and routes to the right sub-flow via its Intent Routing table. Covers: (1) Onchain OS onboarding + welcome banner — 'what is onchainos', 'what is onchain os', 'what can it do', 'what can onchainos do', 'what does onchainos do', 'how do I use this', 'how do I play', 'how to use onchainos', 'how to play onchainos', 'how does onchainos work', 'how do I start', 'getting started', 'tutorial', 'onboarding', 'first time', 'I just installed', 'now what', 'what do I do now', 'where do I start', 'who are you', 'what are you', 'introduce onchainos', 'tell me about onchainos', 'I'm new'; (2) OKX.AI intro & role-registration routing (the Agent economic system — roles User / ASP / Evaluator) — 'what is OKX.AI', 'OKX.AI 是什么', 'how to use OKX.AI', 'OKX.AI 快速开始', and any spelling / spacing / casing / typo variant (OKXAI, okx ai, okx-ai, lowercase okx.ai, 啥是okxai); (
- ▌ Second Opinion · bg-szyRuns external LLM code reviews (OpenAI Codex or Google Gemini CLI) on uncommitted changes, branch diffs, or specific commits. Use when the user asks for a second opinion, external review, codex review, gemini review, or mentions /second-opinion.
- ▌ Benchmark · bg-szyPerformance regression detection using the browse daemon. Establishes baselines for page load times, Core Web Vitals, and resource sizes. Compares before/after on every PR. Tracks performance trends over time. Use when: "performance", "benchmark", "page speed", "lighthouse", "web vitals", "bundle size", "load time". (gstack) Voice triggers (speech-to-text aliases): "speed test", "check performance".
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- ▌ Hooked UX · bg-szyDesign habit-forming product loops using the Hook Model (Trigger, Action, Variable Reward, Investment). Use when the user mentions "users arent coming back", "engagement loops", "habit formation", "push notifications", "variable rewards", "daily active users", "habit zone", or "user retention loops". Also trigger when designing notification strategies, building streaks or progress systems, or analyzing why users stop using a product after initial signup. Covers ethics evaluation and onboarding for habits. For friction reduction and B=MAP, see improve-retention. For viral sharing, see contagious.
- ▌ Plan Tune · bg-szySelf-tuning question sensitivity + developer psychographic for gstack (v1: observational). Review which AskUserQuestion prompts fire across gstack skills, set per-question preferences (never-ask / always-ask / ask-only-for-one-way), inspect the dual-track profile (what you declared vs what your behavior suggests), and enable/disable question tuning. Conversational interface — no CLI syntax required. Use when asked to "tune questions", "stop asking me that", "too many questions", "show my profile", "what questions have I been asked", "show my vibe", "developer profile", or "turn off question tuning". (gstack) Proactively suggest when the user says the same gstack question has come up before, or when they explicitly override a recommendation for the Nth time.
- ▌ Worktrees · bg-szyUse when starting feature work that needs isolation from current workspace or before executing implementation plans - creates isolated git worktrees with smart directory selection and safety verification
- ▌ Medchem · bg-szyMedicinal chemistry filters for compound triage. Drug-likeness rules (Lipinski Ro5, Veber, Oprea, CNS, leadlike, REOS, Golden Triangle, Ro3), structural alerts (PAINS, NIBR, Lilly Demerits), chemical group detectors, complexity metrics, and filter composition query language. Built on RDKit/datamol. For hit-to-lead filtering, library design, ADMET pre-screening. For molecular I/O use rdkit-cheminformatics or datamol.
- ▌ Onekgpd · bg-szyQuery the 1000 Genomes Project dataset (3,202 whole-genome-sequenced individuals, GRCh38) at the level of individual participants. Use when a question is about individuals or variants in the 1000 Genomes Project cohort: which individuals carry variants matching specific criteria in a gene or region, which individuals are homozygous-reference at a position, which variants exist in the dataset or carried by specified individuals in a gene or region, the relatedness between two specified individuals. Variants are returned with 1000 Genomes allele frequencies (AF), gnomAD v4.1 exome and genome AF, AlphaMissense score, and HGVSp annotations.
- ▌ Seaborn · bg-szyStatistical visualization with pandas integration. Use for quick exploration of distributions, relationships, and categorical comparisons with attractive defaults. Best for box plots, violin plots, pair plots, heatmaps. Built on matplotlib. For interactive plots use plotly; for publication styling use scientific-visualization.
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- ▌ Using Sops · bg-szy bundleUse when a repo has .sops.yaml and secrets/<env>.env, or a pnpm secrets script. Covers reading and writing dev secrets, prod elevation, running with secrets, and the human key setup.
- ▌ Web Search · bg-szy bundleWeb search and content extraction with Tavily and Exa via inference.sh CLI. Apps: Tavily Search, Tavily Extract, Exa Search, Exa Answer, Exa Extract. Capabilities: AI-powered search, content extraction, direct answers, research. Use for: research, RAG pipelines, fact-checking, content aggregation, agents. Triggers: web search, tavily, exa, search api, content extraction, research, internet search, ai search, search assistant, web scraping, rag, perplexity alternative
- ▌ Kb Advisor · bg-szyKnowledge base advisor — search, synthesize, and update your team's knowledge repositories.
- ▌ Open Graph · bg-szyWhen the user wants to add or optimize Open Graph metadata for social sharing. Also use when the user mentions "Open Graph," "og:tags," "og:title," "og:image," "og:description," "Facebook preview," "LinkedIn preview," or "social share preview." For X (Twitter) link previews, use twitter-cards. For SERP title/description, use title-tag and meta-description.
- ▌ Pair Agent · bg-szyPair a remote AI agent with your browser. One command generates a setup key and prints instructions the other agent can follow to connect. Works with OpenClaw, Hermes, Codex, Cursor, or any agent that can make HTTP requests. The remote agent gets its own tab with scoped access (read+write by default, admin on request). Use when asked to "pair agent", "connect agent", "share browser", "remote browser", "let another agent use my browser", or "give browser access". (gstack) Voice triggers (speech-to-text aliases): "pair agent", "connect agent", "share my browser", "remote browser access".
- ▌ Robots Txt · bg-szyWhen the user wants to configure, audit, or optimize robots.txt. Also use when the user mentions "robots.txt," "crawler rules," "block crawlers," "AI crawlers," "GPTBot," "allow/disallow," "disallow path," "crawl directives," "user-agent," "block Googlebot," "fix robots.txt," "robots.txt blocking," or "search engine crawling." For indexing, use indexing.
- ▌ Typography · bg-szyApply professional typographic rules to screen-based UI, including font selection that escapes the generic AI monoculture (no Inter/Roboto/Geist/Fraunces) using only open-licensed, free-for-commercial fonts. Use when generating any UI with visible text, choosing or replacing fonts, avoiding generic/AI-looking type, auditing typography violations, or when the user asks about font sizing, line height, spacing, quotes, dashes, or text formatting.
- ▌ Write Plan · bg-szyUse when you have a spec or requirements for a multi-step task, before touching code. Produces an engineering plan complete with TDD tasks, DRY/SOLID/YAGNI principles, a required Test Plan & Verification section, and a coverage target — then auto-runs /plan-eng-review as an independent double-check before execution.
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- ▌ Scrna Qc · bg-szy bundleExecute the MAD-based single-cell RNA-seq QC workflow (scripts + Python API) to filter low-quality cells and emit reports plus filtered AnnData files.
- ▌ Scout Pro · bg-szyEnhanced skill navigator that maps conversation history, recommends multi-skill chains, identifies patterns from past usage, and learns from session outcomes. Goes beyond basic scout with deep context analysis and workflow orchestration.
- ▌ Agent Tools · bg-szy bundleRun AI apps via inference.sh CLI - image generation, video creation, LLMs, search, 3D, Twitter automation. Models: FLUX, Veo, Gemini, Grok, Claude, Seedance, OmniHuman, Tavily, Exa, OpenRouter, and many more. Use when running AI apps, generating images/videos, calling LLMs, web search, or automating Twitter. Triggers: inference.sh, infsh, ai model, run ai, serverless ai, ai api, flux, veo, claude api, image generation, video generation, openrouter, tavily, exa search, twitter api, grok
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- ▌ DB Optimize · bg-szyDatabase performance audit — detects N+1 queries, missing indexes, join opportunities, slow queries, EXPLAIN analysis, and per-endpoint DB call counts. Use when asked to "optimize the database", "find slow queries", "check for N+1", "analyze query performance", or "audit DB calls".
- ▌ Design HTML · bg-szyDesign finalization: generates production-quality Pretext-native HTML/CSS. Works with approved mockups from /design-shotgun, CEO plans from /plan-ceo-review, design review context from /plan-design-review, or from scratch with a user description. Text actually reflows, heights are computed, layouts are dynamic. 30KB overhead, zero deps. Smart API routing: picks the right Pretext patterns for each design type. Use when: "finalize this design", "turn this into HTML", "build me a page", "implement this design", or after any planning skill. Proactively suggest when user has approved a design or has a plan ready. (gstack) Voice triggers (speech-to-text aliases): "build the design", "code the mockup", "make it real".