bg-szy
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- ▌ Reddit Thread Analyzer · bg-szyAnalyze Reddit threads for sentiment, consensus opinions, top arguments, and discussion patterns. Use this when users want to understand Reddit community opinions, analyze discussions, or gather insights from subreddit conversations.
- ▌ Review Response Writer · bg-szyRespond to Google, Yelp, and industry reviews in the owner's voice -- gracious on the 5-stars, masterful on the 1-stars. Handles the angry customer, the unfair review, the fake review, and the one that mentions a legal or health issue. Every response written for the thousand future customers reading it.
- ▌ Sub Agent Orchestrator · bg-szyManages parent/child agent relationships with task delegation and result aggregation. Supports sequential chains, parallel fans, conditional routing, retry logic, timeout handling, and YAML-based visual workflow definition.
- ▌ Test Coverage Improver · bg-szyAnalyze test coverage gaps and generate tests to improve coverage. Use when improving test coverage, finding untested code, or writing missing tests.
- ▌ Weekly Business Report · bg-szyAuto-generates weekly KPI reports from multiple data sources including Supabase analytics, CRM data, financial spreadsheets, and email metrics. Produces executive-ready reports with dashboards, trends, highlights, concerns, and action items.
- ▌ Vulnerability Triage Brocards · bg-szyThis skill should be used when the user asks to "triage a vulnerability report", "assess a CVE", "evaluate a bug bounty submission", "decide if a finding is valid", "review a security finding", "dismiss a vulnerability", "should we fix this CVE", "prioritize a vulnerability report", or needs to determine whether an incoming vulnerability report warrants investigation. Applies 7 brocards (rules of thumb) to systematically accept, dismiss, or request more information on vulnerability reports, or needs to filter raw findings from agentic vulnerability discovery pipelines before human review.
- ▌ Renaissance Architecture · bg-szySoftware architecture and UI/UX principles for building genuinely new solutions, not derivative work. Use when designing features, architecting software, brainstorming apps, reviewing designs, or during strategy discussions. Focuses on first-principles thinking, simplicity where it matters, and creating rather than commenting.
- ▌ Bio Duplicate Handling · bg-szy bundleMark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.
- ▌ Bio Long Read Splicing · bg-szy bundleAnalyzes alternative splicing from PacBio Iso-Seq (HiFi, Kinnex/MAS-Iso-seq) and Oxford Nanopore (direct cDNA, direct RNA, R10.4.1+) long-read RNA-seq with full-isoform resolution. Tools include FLAIR (correct/collapse/quantify/diffSplice for PacBio + ONT), IsoQuant (de-novo or annotation-guided isoform discovery 2024 SOTA), Bambu (annotation-aware Bayesian discovery + quantification with Novel Discovery Rate), SQANTI3 (isoform classification: FSM/ISM/NIC/NNC + artifact flags), rMATS-long (event calling on long-read isoforms), and minimap2 (-ax splice:hq for HiFi; -ax splice -k14 for ONT cDNA; add -uf only for direct RNA or stranded cDNA preps). Solves microexon detection, recursive splicing, complex multi-exon isoforms, and DTU without transcript-quantification uncertainty. Use when short-read AS limitations (anchor length, complex isoforms, microexons, recursive splicing, transcript ambiguity) demand full-isoform resolution.
- ▌ Bio Reverse Complement · bg-szy bundleGenerate reverse complements and complements of DNA/RNA sequences using Biopython. Use when working with opposite strands, primer design, or converting between template and coding strands.
- ▌ Clinical Nlp Extractor · bg-szy bundleExtracts medical entities (Diseases, Medications, Procedures) from unstructured clinical text using regex and simple rules (or LLM wrappers).
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- ▌ Medical Imaging Review · bg-szyWrite comprehensive literature reviews for medical imaging AI research. Use when writing survey papers, systematic reviews, or literature analyses on topics like segmentation, detection, classification in CT, MRI, X-ray, ultrasound, or pathology imaging. Triggers on requests for "review paper", "survey", "literature review", "综述", "systematic review", or mentions of writing academic reviews on deep learning for medical imaging.
- ▌ Mpn Research Assistant · bg-szyMyeloproliferative neoplasm (MPN) research expertise including JAK2/CALR/MPL mutations, myelofibrosis, polycythemia vera, essential thrombocythemia. Use for MPN literature search, driver mutation analysis, PPM1D pathway analysis, fibrosis markers, megakaryocyte biology, clinical trial data interpretation, and translational research.
- ▌ Nature Academic Search · bg-szy bundleMulti-source literature search, citation verification, strict independent other-citation audits, article-level citation metric tables, influential citer profiling with citation-context extraction, MeSH search strategy, citation file management (.nbib/.ris/.bib conversion), and reference management (BibTeX, related articles, ID conversion) via MCP tools (PubMed, CrossRef, arXiv, Scopus, ScienceDirect). Use for coordinated literature workflows beyond one MCP call, including 文献检索、 查文献、找文献、文献综述检索、查论文、引文核对、参考文献管理、文献去重、 严格他引、他引判定、排除自引、谁引用了我的文章、引用我的文章的人有没有大牛、 院士引用、校长引用、院长引用、杰青引用、长江学者引用、Fellow引用、文章引用表、 指定文章引用数、严格他引数、整理成表格.
- ▌ Pharmacogenomics Agent · bg-szyAI-driven pharmacogenomic analysis for precision dosing and adverse event prediction using multi-omics data.
- ▌ Quality Nonconformance · bg-szyCodified expertise for quality control, non-conformance investigation, root cause analysis, corrective action, and supplier quality management in regulated manufacturing. Informed by quality engineers with 15+ years experience across FDA, IATF 16949, and AS9100 environments. Includes NCR lifecycle management, CAPA systems, SPC interpretation, and audit methodology. Use when investigating non-conformances, performing root cause analysis, managing CAPAs, interpreting SPC data, or handling supplier quality issues.
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- ▌ Workflow Skill Creator · bg-szyDistills a completed user workflow or interaction into a reusable agent skill. Use when the user asks to turn their workflow, interaction, or multi-step process into a skill, or when they say "make this a skill", "create a skill from what we just did", "package this workflow" or similar. Do not use for creating skills from scratch without an existing workflow (use a generic skill-creator for that).
- ▌ Container Security · bg-szyContainer image security scanning, Dockerfile hardening, and ACR image management. Use when scanning container images for vulnerabilities with Trivy, hardening Dockerfiles (pinning versions, non-root runtime, SSH config), importing images to Azure Container Registry to avoid Docker Hub rate limits, or analyzing CVE findings. Also trigger when the user mentions image security, vulnerability scanning, CVE remediation, container hardening, Trivy scan, Docker security, or ACR image import — even if they don't explicitly say "container security".
- ▌ Research Add Items · bg-szyAppend new items (research objects) to an in-progress research outline's `outline.yaml` — sourced from your direct input, a web-search agent, or both. Use mid-`/research-outline` when you've realised the items list is incomplete (a new competitor surfaced, an important historical entry was missed, a category needs broader coverage) before running `/research-deep`, so the new items are part of the parallel deep pass instead of needing a separate run.
- ▌ Gemini Interactions API · bg-szy bundleUse this skill when writing code that calls the Gemini API for text generation, multi-turn chat, multimodal understanding, image generation, video generation, streaming responses, background research tasks, function calling, structured output, or migrating from the old generateContent API. This skill covers the Interactions API, the recommended way to use Gemini models and agents in Python and TypeScript.
- ▌ Huggingface LLM Trainer · bg-szy bundleTrain or fine-tune language and vision models using TRL (Transformer Reinforcement Learning) or Unsloth with Hugging Face Jobs infrastructure. Covers SFT, DPO, GRPO and reward modeling training methods, plus GGUF conversion for local deployment. Includes guidance on the TRL Jobs package, UV scripts with PEP 723 format, dataset preparation and validation, hardware selection, cost estimation, Trackio monitoring, Hub authentication, model selection/leaderboards and model persistence. Use for tasks involving cloud GPU training, GGUF conversion, or when users mention training on Hugging Face Jobs without local GPU setup.
- ▌ Mongodb Query Optimizer · bg-szy bundleHelp with MongoDB query optimization and indexing. Use only when the user asks for optimization or performance: "How do I optimize this query?", "How do I index this?", "Why is this query slow?", "Can you fix my slow queries?", "What are the slow queries on my cluster?", etc. Do not invoke for general MongoDB query writing unless user asks for performance or index help. Prefer indexing as optimization strategy. Use MongoDB MCP when available.
- ▌ Security Best Practices · bg-szy bundlePerform language and framework specific security best-practice reviews and suggest improvements. Trigger only when the user explicitly requests security best practices guidance, a security review/report, or secure-by-default coding help. Trigger only for supported languages (python, javascript/typescript, go). Do not trigger for general code review, debugging, or non-security tasks.
- ▌ Simplification Cascades · bg-szy bundleFind one insight that eliminates multiple components - "if this is true, we don't need X, Y, or Z
- ▌ Stitch React Components · bg-szy bundleConvert Stitch HTML and screenshots into modular Vite/React/TypeScript components, or sync existing components to updated Stitch designs, with local architecture and validation checks.
- ▌ Stitch Upload To Stitch · bg-szy bundleUpload approved local HTML, markdown, or image assets to a Stitch project using direct MCP for small DESIGN.md files or the bundled API script for larger files.
- ▌ Test Driven Development · bg-szy bundleWrite the test first, watch it fail, write minimal code to pass
- ▌ Inbox Guardian For Gmail · bg-szy bundleReview a personal Gmail inbox with local, owner-approved spam rules. Use for audit-first quarantine, Trash, sender rules, and header review. Do not use for automatic unsubscribe requests or unreviewed mailbox actions.
- ▌ Zhuangxiu Liucheng Bucai · bg-szy bundle【第一次装修必看】你是第一次装修吗？不知道从哪下手、不清楚下一步该做什么、担心被工长忽悠、想搞清楚装修全流程？这个Skill内置装修课堂知识库，直接教你装修全流程——问收房验房、问开工交底、问拆除砌墙、问水电改造、问瓦工防水、问木工吊顶、问油漆墙面、问安装验收、问工期管理，全部覆盖。适合第一次装修、想搞清楚每一步该做什么的业主。
- ▌ Document Metadata Review · bg-szy bundleInspect PDFs, DOCX, PPTX, and XLSX files for share-readiness, metadata, links, comments, and hidden content.
- ▌ Documentation Automation · bg-szy bundleAutomate doc generation with JSDoc/TSDoc, linters, and pre-commit hooks. Use when setting up markdownlint, configuring doc linting pipelines, integrating JSDoc/TSDoc, or building automated documentation workflows.
- ▌ Homework Notebook Review · bg-szy bundleReview homework notebooks for completeness, reproducibility, safe execution, and academic-integrity boundaries.
- ▌ Huggingface Local Models · bg-szy bundleUse to select models to run locally with llama.cpp and GGUF on CPU, Mac Metal, CUDA, or ROCm. Covers finding GGUFs, quant selection, running servers, exact GGUF file lookup, conversion, and OpenAI-compatible local serving.
- ▌ Huggingface Tool Builder · bg-szy bundleUse this skill when the user wants to build tool/scripts or achieve a task where using data from the Hugging Face API would help. This is especially useful when chaining or combining API calls or the task will be repeated/automated. This Skill creates a reusable script to fetch, enrich or process data.
- ▌ Meta Pattern Recognition · bg-szy bundleSpot patterns appearing in 3+ domains to find universal principles
- ▌ Stitch Extract Design Md · bg-szy bundleExtract a Stitch-compatible DESIGN.md from frontend source code, stylesheets, Tailwind config, theme files, and component patterns.
- ▌ Labarchive Integration · bg-szySecurely integrate with the official LabArchives ELN REST-like API and Inventory API v1. Use for regional endpoint selection, signed-request construction, user authorization and UID flows, local LA container validation, and verified LabArchives integration workflows.
- ▌ Hf Cloud Python Env Setup · bg-szy bundleSet up an isolated Python environment for SageMaker / AWS work, with the right Python version and current boto3. Use this skill whenever Python code will be executed for a SageMaker deployment, training job, or any AWS automation — including when about to run `pip install`, when about to invoke `boto3`, when creating or activating a virtualenv, or when the user asks to "set up the environment". Never use system Python and never `pip install` into it. Always isolate. This skill prevents the most common failure modes: wrong Python version, dependency conflicts, and stale SDKs.
- ▌ Notebook Execution Safety · bg-szy bundleReview Jupyter notebooks for side effects, dependencies, and safe execution strategy before running or editing them.
- ▌ Remembering Conversations · bg-szy bundleSearch previous Claude Code conversations for facts, patterns, decisions, and context using semantic or text search
- ▌ Resolving Merge Conflicts · bg-szy bundleUse when you need to resolve an in-progress git merge/rebase conflict.
- ▌ Accelerated Computing Cudf · bg-szy bundleOfficial NVIDIA-authored guidance for NVIDIA cuDF GPU DataFrames, pandas acceleration, dask-cuDF, ETL, joins, groupby, CSV/Parquet I/O, nullable semantics, and multi-GPU DataFrame workloads.
- ▌ Documentation Verification · bg-szy bundleValidate documentation before merging - check completeness, broken links, code example accuracy, and factual correctness. Use when reviewing docs for quality gates or running pre-merge doc validation.
- ▌ Huggingface Vision Trainer · bg-szy bundleTrains and fine-tunes vision models for object detection (D-FINE, RT-DETR v2, DETR, YOLOS), image classification (timm models — MobileNetV3, MobileViT, ResNet, ViT/DINOv3 — plus any Transformers classifier), and SAM/SAM2 segmentation using Hugging Face Transformers on Hugging Face Jobs cloud GPUs. Covers COCO-format dataset preparation, Albumentations augmentation, mAP/mAR evaluation, accuracy metrics, SAM segmentation with bbox/point prompts, DiceCE loss, hardware selection, cost estimation, Trackio monitoring, and Hub persistence. Use when users mention training object detection, image classification, SAM, SAM2, segmentation, image matting, DETR, D-FINE, RT-DETR, ViT, timm, MobileNet, ResNet, bounding box models, or fine-tuning vision models on Hugging Face Jobs.
- ▌ Spreadsheet Formula Helper · bg-szy bundleWrite and debug spreadsheet formulas (Excel/Google Sheets), pivot tables, and array formulas; translate between dialects; use when users need working formulas with examples and edge-case checks.
- ▌ Stitch Extract Static HTML · bg-szy bundleCapture a self-contained static HTML snapshot from a running app or mock component so it can be reviewed or uploaded to Stitch.
- ▌ Tracing Knowledge Lineages · bg-szy bundleUnderstand how ideas evolved over time to find old solutions for new problems and avoid repeating past failures
- ▌ Breaking Changes Management · bg-szy bundleManage breaking API changes, migration guides, deprecation notices, and semver versioning. Use when introducing breaking changes, writing migration paths, updating changelogs, or releasing major versions.
- ▌ Dispatching Parallel Agents · bg-szy bundleUse multiple Claude agents to investigate and fix independent problems concurrently
- ▌ Huggingface Community Evals · bg-szy bundleRun evaluations for Hugging Face Hub models using inspect-ai and lighteval on local hardware. Use for backend selection, local GPU evals, and choosing between vLLM / Transformers / accelerate. Not for HF Jobs orchestration, model-card PRs, .eval_results publication, or community-evals automation.
- ▌ Huggingface Paper Publisher · bg-szy bundlePublish and manage research papers on Hugging Face Hub. Supports creating paper pages, linking papers to models/datasets, claiming authorship, and generating professional markdown-based research articles.
- ▌ Stitch Manage Design System · bg-szy bundleCreate, list, and apply Stitch design systems from DESIGN.md using the verified Stitch MCP design-system tools and safe upload fallbacks.
- ▌ Stitch React Vite Dashboard · bg-szy bundleConvert approved Stitch exports into accessible React and Vite dashboards with DESIGN.md tokens, TanStack Query data boundaries, responsive layouts, and optional read-only Web3 integrations.
- ▌ Subagent Driven Development · bg-szy bundleExecute implementation plan by dispatching fresh subagent for each task, with code review between tasks
- ▌ Train Sentence Transformers · bg-szy bundleTrain or fine-tune sentence-transformers models across `SentenceTransformer` (bi-encoder, dense or static embedding model for retrieval, similarity, clustering, classification, paraphrase mining, dedup, multimodal), `CrossEncoder` (reranker, pair scoring for two-stage retrieval / pair classification), `SparseEncoder` (SPLADE, sparse embedding model for learned-sparse retrieval), and `MultiVectorEncoder` (ColBERT / late-interaction, per-token embeddings scored with MaxSim). Covers loss selection, hard-negative mining, evaluators, distillation, LoRA, Matryoshka, and Hugging Face Hub publishing. Use for any sentence-transformers training task.
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- ▌ Excalidraw Diagram Generator · bg-szy bundleGenerate .excalidraw diagrams from natural language. Use when creating flowcharts, mind maps, system architecture diagrams, sequence diagrams, ER diagrams, network diagrams, or any visual process visualization.
- ▌ Infostealer Malware Detector · bg-szy bundleDetects and removes infostealer malware (credential stealers, data exfiltrators) via full-system file search, cryptographic hashing, and public threat-intelligence cross-checks (VirusTotal, MalwareBazaar). Primary method is always custom hash-based detection. Windows Defender (or any platform-native AV) is allowed **only when necessary** (e.g. inconclusive hashes or deep remediation) and **must never be the default option**. The agent must exhaust the custom workflow first. Works on Windows/macOS/Linux.
- ▌ Improve Codebase Architecture · bg-szy bundleScan a codebase for deepening opportunities, present them as a visual HTML report, then guide a user-directed decision loop for the selected candidate.
- ▌ Testing Skills With Subagents · bg-szy bundleRED-GREEN-REFACTOR for process documentation - baseline without skill, write addressing failures, iterate closing loopholes
- ▌ Competition Submission Checker · bg-szy bundleValidate GCI competition predictions and notebook outputs against expected schema, metric, and submission constraints.
- ▌ Deepstream Import Vision Model · bg-szy bundleNVIDIA DeepStream model-import guidance for bringing vision models from Hugging Face or NVIDIA NGC into DeepStream pipelines with export, TensorRT build, and benchmark steps.
- ▌ Finishing A Development Branch · bg-szy bundleComplete feature development with structured options for merge, PR, or cleanup
- ▌ Hf Cloud AWS Context Discovery · bg-szy bundleDiscover the user's local AWS context (active profile, region, account ID, caller identity) at the start of any AWS task. Use this skill before any other AWS work — deploying to SageMaker, creating resources, calling AWS APIs, or anything that touches an AWS account. Use it especially when the user has not specified a region or profile explicitly, when they say things like "use my AWS account", "deploy to AWS", "use my profile", or when about to make any AWS CLI or SDK call. Never guess the region or account ID — always use this skill to read it from the local configuration first.
- ▌ Huggingface Lora Space Builder · bg-szy bundleBuild and publish a Gradio demo on Hugging Face Spaces for a user-provided LoRA. Use when someone asks to create, generate, ship, or publish a Space, demo, Gradio app, or playground for a LoRA — including LoRAs for Qwen-Image, Qwen-Image-Edit, LTX-Video, Wan, FLUX, SDXL, or other diffusion base models. Also triggers when someone describes a LoRA they trained or hosts on the Hub and wants to share it. Covers picking the right base pipeline and `diffusers` inference recipe, designing a UI tailored to the LoRA's task and inputs (Union/multi-task control, edit, video, image, etc.), respecting model-card recommendations (trigger words, steps, guidance, LoRA scale, example inputs), and shipping to ZeroGPU hardware as a private Space by default.
- ▌ Preserving Productive Tensions · bg-szy bundleRecognize when disagreements reveal valuable context, preserve multiple valid approaches instead of forcing premature resolution
- ▌ Verification Before Completion · bg-szy bundleRun verification commands and confirm output before claiming success
- ▌ Mongodb Atlas Stream Processing · bg-szy bundleManages MongoDB Atlas Stream Processing (ASP) workflows. Handles workspace provisioning, data source/sink connections, processor lifecycle operations, debugging diagnostics, and tier sizing. Supports Kafka, Atlas clusters, S3, HTTPS, and Lambda integrations for streaming data workloads and event processing. NOT for general MongoDB queries or Atlas cluster management. Requires MongoDB MCP Server with Atlas API credentials.
- ▌ Tweetclaw X Twitter Automation · bg-szyUse TweetClaw with OpenClaw to search tweets, search tweet replies, export followers, inspect users, monitor X/Twitter, and prepare reviewed post or reply actions.
- ▌ Final Assignment Citation Review · bg-szy bundleReview final-assignment materials for requirements, citations, AI-use disclosure, and data-analysis completeness.
- ▌ Hf Cloud Sagemaker Iam Preflight · bg-szy bundleEnsure a usable SageMaker execution role exists before deploying or training. Use this skill whenever about to create a SageMaker endpoint, model, training job, or any resource that requires an execution role. Use it especially when the user has not provided a role ARN explicitly, when scripts are about to call `iam:CreateRole`, or when an AccessDenied error mentions an IAM action. Never blindly call `iam:CreateRole` — always check for existing roles first. This skill prevents the most common SageMaker deployment failure: trying to create IAM resources from an SSO principal that has no IAM write permissions.
- ▌ Hf Cloud Serving Image Selection · bg-szy bundlePick the right serving container for a SageMaker model deployment and find its current image URI. Use this skill whenever about to deploy a model to a SageMaker endpoint and an image URI needs to be chosen — including when the user says "deploy this LLM", "host this HuggingFace model", "serve this fine-tuned model", "deploy this embedding model", "host a reranker", "serve a sentence-transformers model", or when about to hardcode any container URI in deployment code. HuggingFace-curated Deep Learning Containers are ALWAYS preferred: HuggingFace vLLM (LLMs and generative rerankers), HuggingFace vLLM-Omni (multimodal), TEI (embeddings/cross-encoder rerankers), HF Inference Toolkit (other transformers). Generic images (AWS vLLM, DJL-LMI, SGLang) are used only when no HuggingFace image is compatible — never merely because they carry a newer version. Never hardcode a container URI from memory and never default to TGI. Prevents stale-image failures and wrong-region URIs.
- ▌ Step By Step Web Project Builder · bg-szy bundleActivate for building or scaffolding web apps when the user is learning (e.g., todo apps, portfolios, dashboards).
- ▌ Supabase Postgres Best Practices · bg-szy bundlePostgres best practices maintained by Supabase, for Postgres running anywhere. Load this skill BEFORE writing or changing anything that lives in a Postgres database: creating or altering tables and columns (including choosing column types), schema design, migrations and declarative schema files, RLS policies and the tests that verify them, indexes, triggers, database functions, queues and scheduled jobs (pg_cron, pgmq), vector/semantic search (pgvector), and restoring dumps (pg_restore) or importing data. Also load it when diagnosing slow queries, high CPU, timeouts, EXPLAIN plans, connection exhaustion, locking, bloat, or rows visible to the wrong user or tenant. This is not just a performance guide — schema, migration, security, and SQL authoring tasks need these rules too, even for a one-column change or a single query.
- ▌ Deseq2 Differential Expression · bg-szyBulk RNA-seq DE with R/Bioconductor DESeq2. Negative binomial GLM, empirical Bayes shrinkage, Wald/LRT tests, multi-factor designs, Salmon tximeta import, apeglm LFC shrinkage, MA/volcano/heatmap viz. R gold standard. Use pydeseq2-differential-expression for Python; use edgeR for TMM normalization.
- ▌ Mongodb Natural Language Querying · bg-szy bundleGenerate read-only MongoDB queries (find) or aggregation pipelines using natural language, with collection schema context and sample documents. Use this skill whenever the user asks to write, create, or generate MongoDB queries, wants to filter/query/aggregate data in MongoDB, asks "how do I query...", needs help with query syntax, or discusses finding/filtering/grouping MongoDB documents. Also use for translating SQL-like requests to MongoDB syntax. Does NOT handle Atlas Search ($search operator), vector/semantic search ($vectorSearch operator), fuzzy matching, autocomplete indexes, or relevance scoring - use search-and-ai for those. Does NOT analyze or optimize existing queries - use mongodb-query-optimizer for that. Does NOT handle aggregation pipelines that involve write operations. Requires MongoDB MCP server.
- ▌ Bio Rnaseq Qc · bg-szy bundleRNA-seq specific quality control including rRNA contamination detection, strandedness verification, gene body coverage, and transcript integrity metrics. Use when validating RNA-seq libraries before differential expression analysis.
- ▌ Hf Cloud Sagemaker Deployment Planner · bg-szy bundlePlan and coordinate the deployment of a model to Amazon SageMaker AI. Use this skill whenever the user wants to deploy, host, serve, or expose a model on SageMaker or AWS — including phrases like "deploy a model", "host this LLM on AWS", "serve this embedding model", "deploy a reranker", "deploy a text-to-image / diffusion model", "host this for async inference", "create an endpoint", "serve my fine-tuned model", or any request that involves making a model available for inference on AWS. Use this even when the user is vague (e.g. "I just want to get this running on AWS, you figure it out"). Works for text-generation LLMs, embedding models, rerankers, classifiers, text-to-image / diffusion models — picks the right serving stack and chooses between real-time and async inference. This is the entry-point skill for SageMaker deployment work — it asks clarifying questions, picks a deployment pathway, and coordinates the other deployment skills.
- ▌ Hf Cloud Sagemaker Production Defaults · bg-szy bundleCreate a SageMaker endpoint (real-time, real-time scale-to-zero, or async) with autoscaling, CloudWatch alarms, and tagging enabled by default. Use this skill whenever about to create a SageMaker endpoint, write deployment code that calls `create_endpoint`, or finalize a deployment after the image URI and IAM role are known. Provides deploy.py for real-time endpoints, deploy_ic.py for real-time endpoints that scale to zero instances via inference components, and deploy_async.py for async endpoints (also scale-to-zero). This is the last step in the SageMaker deployment workflow. Never generate a bare `create_endpoint` call without these defaults — endpoints without autoscaling or alarms are demos, not deployments.
- ▌ Pulling Updates From Skills Repository · bg-szy bundleSync local skills repository with upstream changes from obra/superpowers-skills
- ▌ Bio Longread Qc · bg-szy bundleQuality control for long-read sequencing data using NanoPlot, NanoStat, and chopper. Generate QC reports, filter reads by length and quality, and visualize read characteristics. Use when assessing ONT or PacBio run quality or filtering reads before assembly or alignment.
- ▌ Bio Pdb Structure Io · bg-szy bundleParse and write protein structure files using Biopython Bio.PDB. Use when reading PDB, mmCIF, and MMTF files, downloading structures from RCSB PDB, or writing structures to various formats.
- ▌ Bio Longread Medaka · bg-szy bundlePolish assemblies and call variants from Oxford Nanopore data using medaka. Uses neural networks trained on specific basecaller versions. Use when improving ONT-only assemblies or calling variants from Nanopore data without short-read polishing.
- ▌ Bio Splicing Pipeline · bg-szy bundleEnd-to-end alternative splicing analysis from FASTQ to differential splicing results for short-read bulk RNA-seq. Aligns with STAR 2-pass cohort-style, performs junction QC (RSeQC, MaxEntScan, SpliceAI), runs rMATS-turbo and leafcutter for concordant differential analysis, optionally MAJIQ V3 for complex events / heterogeneous cohorts, isoform-switching with NMD/ORF/domain consequences (IsoformSwitchAnalyzeR v2 + DRIMSeq+DEXSeq+stageR DTU), and sashimi visualizations. Use when performing comprehensive splicing analysis from raw bulk RNA-seq data; for variant-driven splice prediction see splice-variant-prediction; for rare-disease single-patient outlier detection see outlier-splicing-detection; for full-isoform PacBio/ONT analysis see long-read-splicing.
- ▌ Bio Longread Alignment · bg-szy bundleAlign long reads using minimap2 for Oxford Nanopore and PacBio data. Supports various presets for different read types and applications. Use when aligning ONT or PacBio reads to a reference genome for variant calling, SV detection, or coverage analysis.
- ▌ Bio Pdb Geometric Analysis · bg-szy bundlePerform geometric calculations on protein structures using Biopython Bio.PDB. Use when measuring distances, angles, and dihedrals, superimposing structures, calculating RMSD, or computing solvent accessible surface area (SASA).
- ▌ Bio Liquid Biopsy Pipeline · bg-szy bundleCell-free DNA analysis pipeline from plasma sequencing to tumor monitoring. Preprocesses cfDNA reads, analyzes fragment patterns, estimates tumor fraction from sWGS, and optionally detects mutations from targeted panels. Use when analyzing liquid biopsy samples for cancer detection or monitoring.
- ▌ Bio Pdb Structure Navigation · bg-szy bundleNavigate protein structure hierarchy using Biopython Bio.PDB SMCRA model. Use when accessing models, chains, residues, and atoms, iterating over structure levels, or extracting sequences from PDB files.
- ▌ Bio Longread Structural Variants · bg-szy bundleDetect structural variants from long-read alignments using Sniffles, cuteSV, and SVIM. Use when detecting deletions, insertions, inversions, translocations, or complex rearrangements from ONT or PacBio data, especially those missed by short-read methods.
- ▌ Bio Pdb Structure Modification · bg-szy bundleModify protein structures using Biopython Bio.PDB. Use when transforming coordinates, removing atoms or residues, adding new entities, modifying B-factors and occupancies, or building structures programmatically.
- ▌ Diasporic Intelligence · bg-szyUse when writing, reviewing, citing, or implementing Diasporic Intelligence, a source-credited framework also described as Afrotemporalism in Action. Preserves source credit, consent governance, provenance, revocation, lineage boundaries, and the distinction from generic cultural AI, biometric extraction, and ancestor impersonation.
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- ▌ Doc · bg-szy bundleUse when the task involves reading, creating, or editing `.docx` documents, especially when formatting or layout fidelity matters; prefer `python-docx` plus the bundled `scripts/render_docx.py` for visual checks.
- ▌ PDF · bg-szy bundleUse when tasks involve reading, creating, or reviewing PDF files where rendering and layout matter; prefer visual checks by rendering pages (Poppler) and use Python tools such as `reportlab`, `pdfplumber`, and `pypdf` for generation and extraction.
- ▌ SEO · bg-szy bundleOptimize for search engine visibility and ranking. Use when asked to "improve SEO", "optimize for search", "fix meta tags", "add structured data", "sitemap optimization", or "search engine optimization".
- ▌ DOCX · bg-szy bundleUse this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files). Covers polished document output, tracked changes, comments, image updates, XML-level repairs, and safe conversion workflows.
- ▌ PPTX · bg-szy bundleUse this skill any time a `.pptx` file is involved as input, output, or both. Covers reading decks, editing existing presentations, creating slides from scratch, visual QA, notes, layouts, and presentation-safe file transforms.